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The map label for this gene is ybaY [C]

Identifier: 114799598

GI number: 114799598

Start: 1321338

End: 1322858

Strand: Reverse

Name: ybaY [C]

Synonym: HNE_1289

Alternate gene names: 114799598

Gene position: 1322858-1321338 (Counterclockwise)

Preceding gene: 114799228

Following gene: 114798913

Centisome position: 35.7

GC content: 64.96

Gene sequence:

>1521_bases
ATGGCGAATATCAAGTTTCACAAGGGCCTGCTTGTCCCCCTCTTTCTGATGGGCGCAGTGCCAATTCTCAGCGCCTGCCA
GACGCCCCCGTCCACCCTGTCGCCCACGGAGGAAGCAGCCCTGCTCACCATCTCCGGCTCTGCCACCTACCGCGAGCGCA
TCGCCGCCCCGCAAGGCGCCACCCTCACCGTGGAACTCAGCGACACCTCCCGCGCCGACGCCCCCGCCATCCCGGTCGCG
GACTGGTCGGCCAGCCTCGATCAGGGCGGCGTCCCGAAAAATTTCACGCTGGAAGTCAATGAACCCCTCGATCCGCGCTT
CACCTACACCCTGCGCGCCACCATCACCGGGCCCGACGGCGACCTCCTCTGGACCACCGATACAGTCCACCAGCTGATGG
CCGTTACGGGCGACCTCGAAGCGGGCGAACTTGTCATGGTCATGGTTCAGCCTGCGCCAGAACCGGAGCCAGAACCGGAA
ACCCCTGAAGTGACCGGCAATGAATATCGCGTCTCCGCCATTGGCGGCGATGCCGTCACCGGCTCACGCCCCGTCACGAT
CAATTTCATGGAAGATGGCCGCGTCAACGGCTTTGGCGGCTGCAACAGCTTCGGCGGCAGCTTCAAGGAATCCAACGGCA
AGCTCACCTTCGGCGATCTGATTTCCACCATGATGGCCTGCCTTGATGTGCCCGCCGGCGCCCAGGAAAGCGCCCTCTAC
GAAACCCTGCGCGGCACCGTCACCGTCGCCCCCGGCGCCGATGGCAAGGTCATCCTCACCGGCGAAAATGACACGAAGAT
CGAACTGGTCTCCACCGCGCTGAAGCCGCTGGCCGGCACCAGCTGGCTGGTCGAAACCATGGGCGGCACCGCCATTGTGG
CGGGCAGCGAACCGCAGATCAATTTCGACGCCGATGGCAAGATCAACGGCACCACCGGCTGCAACCAGTTCTTTGGCGGC
TACGCCCAGAACGGCGCCGCGATCGCCTTCACCGGCGTCGGCATGACCAAGATGGCCTGCATGTCAGACGGCGTGATGGA
GCAGGAAACCGCCTTCGGCGCGATCCTCTCGGGCAACACTCAGGCGAAGATTGACAGCCTCGGCAATCTCGTCATTCGCG
GCGAAGACGGCATCTCCTTCACCGCCCGCCCGCTGCCCGCTGAGGGCGAAGCGACGGAAGGCGATCCCGCCGTCCTTGGC
GGCGGCGCCTGGCAGGTCGAAGACCTCAACCGCGCCGGCATCATTGATAACACCGTCCTTACCCTGACCTTCACCGAAGA
TGGCAAGGTCTCCGGCTCCACCGGCTGCAACAGCCTCTCGGGCACCTACACGTCAACGGGCACCACGCTCACCTTCTCCC
CCCTGATGATGACGCGCCGCGCCTGCGTCGCGCCCGCGCTCAACAATCAGGAATCGAAGTTCACCACCGCCCTGCAAGGC
GAAATGGCCTGGCGCATCACAGCCGATGGCGCCCTCGAACTCACGCGCGAGGGCGGCCACCGCATTCTGCTGCGCCGCTG
A

Upstream 100 bases:

>100_bases
CTGGTGCCTTTCCTTGAGGGAATCTACGCCGGCCGCAGGCCGAAACAGGCACCAGGCAAAAAACCGGGCGACCGGGCCAG
ACATTCAAAGGGAGACTACA

Downstream 100 bases:

>100_bases
AAAGCGGGGATAAGCGCGGCCCTATCCCCCGATGGGGCCGCCGCCCTGCCTGGTCACTACCATCACGCTCGGGCGTGGCG
GCATGGCCTCGGCAAAGTCC

Product: putative lipoprotein

Products: NA

Alternate protein names: Conserved Domain Protein; Lipoprotein

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MANIKFHKGLLVPLFLMGAVPILSACQTPPSTLSPTEEAALLTISGSATYRERIAAPQGATLTVELSDTSRADAPAIPVA
DWSASLDQGGVPKNFTLEVNEPLDPRFTYTLRATITGPDGDLLWTTDTVHQLMAVTGDLEAGELVMVMVQPAPEPEPEPE
TPEVTGNEYRVSAIGGDAVTGSRPVTINFMEDGRVNGFGGCNSFGGSFKESNGKLTFGDLISTMMACLDVPAGAQESALY
ETLRGTVTVAPGADGKVILTGENDTKIELVSTALKPLAGTSWLVETMGGTAIVAGSEPQINFDADGKINGTTGCNQFFGG
YAQNGAAIAFTGVGMTKMACMSDGVMEQETAFGAILSGNTQAKIDSLGNLVIRGEDGISFTARPLPAEGEATEGDPAVLG
GGAWQVEDLNRAGIIDNTVLTLTFTEDGKVSGSTGCNSLSGTYTSTGTTLTFSPLMMTRRACVAPALNNQESKFTTALQG
EMAWRITADGALELTREGGHRILLRR

Sequences:

>Translated_506_residues
MANIKFHKGLLVPLFLMGAVPILSACQTPPSTLSPTEEAALLTISGSATYRERIAAPQGATLTVELSDTSRADAPAIPVA
DWSASLDQGGVPKNFTLEVNEPLDPRFTYTLRATITGPDGDLLWTTDTVHQLMAVTGDLEAGELVMVMVQPAPEPEPEPE
TPEVTGNEYRVSAIGGDAVTGSRPVTINFMEDGRVNGFGGCNSFGGSFKESNGKLTFGDLISTMMACLDVPAGAQESALY
ETLRGTVTVAPGADGKVILTGENDTKIELVSTALKPLAGTSWLVETMGGTAIVAGSEPQINFDADGKINGTTGCNQFFGG
YAQNGAAIAFTGVGMTKMACMSDGVMEQETAFGAILSGNTQAKIDSLGNLVIRGEDGISFTARPLPAEGEATEGDPAVLG
GGAWQVEDLNRAGIIDNTVLTLTFTEDGKVSGSTGCNSLSGTYTSTGTTLTFSPLMMTRRACVAPALNNQESKFTTALQG
EMAWRITADGALELTREGGHRILLRR
>Mature_505_residues
ANIKFHKGLLVPLFLMGAVPILSACQTPPSTLSPTEEAALLTISGSATYRERIAAPQGATLTVELSDTSRADAPAIPVAD
WSASLDQGGVPKNFTLEVNEPLDPRFTYTLRATITGPDGDLLWTTDTVHQLMAVTGDLEAGELVMVMVQPAPEPEPEPET
PEVTGNEYRVSAIGGDAVTGSRPVTINFMEDGRVNGFGGCNSFGGSFKESNGKLTFGDLISTMMACLDVPAGAQESALYE
TLRGTVTVAPGADGKVILTGENDTKIELVSTALKPLAGTSWLVETMGGTAIVAGSEPQINFDADGKINGTTGCNQFFGGY
AQNGAAIAFTGVGMTKMACMSDGVMEQETAFGAILSGNTQAKIDSLGNLVIRGEDGISFTARPLPAEGEATEGDPAVLGG
GAWQVEDLNRAGIIDNTVLTLTFTEDGKVSGSTGCNSLSGTYTSTGTTLTFSPLMMTRRACVAPALNNQESKFTTALQGE
MAWRITADGALELTREGGHRILLRR

Specific function: Unknown

COG id: COG3187

COG function: function code O; Heat shock protein

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52781; Mature: 52650

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANIKFHKGLLVPLFLMGAVPILSACQTPPSTLSPTEEAALLTISGSATYRERIAAPQGA
CCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCC
TLTVELSDTSRADAPAIPVADWSASLDQGGVPKNFTLEVNEPLDPRFTYTLRATITGPDG
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCC
DLLWTTDTVHQLMAVTGDLEAGELVMVMVQPAPEPEPEPETPEVTGNEYRVSAIGGDAVT
CEEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
GSRPVTINFMEDGRVNGFGGCNSFGGSFKESNGKLTFGDLISTMMACLDVPAGAQESALY
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHH
ETLRGTVTVAPGADGKVILTGENDTKIELVSTALKPLAGTSWLVETMGGTAIVAGSEPQI
HHHCCEEEEECCCCCEEEEECCCCCEEEEEHHHHHHCCCCCCEEECCCCEEEEECCCCCE
NFDADGKINGTTGCNQFFGGYAQNGAAIAFTGVGMTKMACMSDGVMEQETAFGAILSGNT
EECCCCEECCCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHEEEEEECCC
QAKIDSLGNLVIRGEDGISFTARPLPAEGEATEGDPAVLGGGAWQVEDLNRAGIIDNTVL
CEEHHCCCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEE
TLTFTEDGKVSGSTGCNSLSGTYTSTGTTLTFSPLMMTRRACVAPALNNQESKFTTALQG
EEEEECCCCCCCCCCCCCCCCCEECCCCEEEEHHHHHHHHHHHCCCCCCCCCCEEEEECC
EMAWRITADGALELTREGGHRILLRR
CEEEEEECCCEEEEEECCCCEEEEEC
>Mature Secondary Structure 
ANIKFHKGLLVPLFLMGAVPILSACQTPPSTLSPTEEAALLTISGSATYRERIAAPQGA
CCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCC
TLTVELSDTSRADAPAIPVADWSASLDQGGVPKNFTLEVNEPLDPRFTYTLRATITGPDG
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCC
DLLWTTDTVHQLMAVTGDLEAGELVMVMVQPAPEPEPEPETPEVTGNEYRVSAIGGDAVT
CEEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
GSRPVTINFMEDGRVNGFGGCNSFGGSFKESNGKLTFGDLISTMMACLDVPAGAQESALY
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHH
ETLRGTVTVAPGADGKVILTGENDTKIELVSTALKPLAGTSWLVETMGGTAIVAGSEPQI
HHHCCEEEEECCCCCEEEEECCCCCEEEEEHHHHHHCCCCCCEEECCCCEEEEECCCCCE
NFDADGKINGTTGCNQFFGGYAQNGAAIAFTGVGMTKMACMSDGVMEQETAFGAILSGNT
EECCCCEECCCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHEEEEEECCC
QAKIDSLGNLVIRGEDGISFTARPLPAEGEATEGDPAVLGGGAWQVEDLNRAGIIDNTVL
CEEHHCCCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEE
TLTFTEDGKVSGSTGCNSLSGTYTSTGTTLTFSPLMMTRRACVAPALNNQESKFTTALQG
EEEEECCCCCCCCCCCCCCCCCEECCCCEEEEHHHHHHHHHHHCCCCCCCCCCEEEEECC
EMAWRITADGALELTREGGHRILLRR
CEEEEEECCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA