| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114798913
Identifier: 114798913
GI number: 114798913
Start: 1317846
End: 1319120
Strand: Reverse
Name: 114798913
Synonym: HNE_1287
Alternate gene names: NA
Gene position: 1319120-1317846 (Counterclockwise)
Preceding gene: 114799598
Following gene: 114798131
Centisome position: 35.6
GC content: 61.88
Gene sequence:
>1275_bases ATGCACGACCAGGCACAGAACAGTTCAAGCATCAAGGACTCCGCCGCCCCGGAAGAGGCGCGGTGCCTGAAAGTCATGGT GTATCGTGATCGCTATCCAACGGCGTTCATGACGCCGAGAATTTCGCGTCACGAGATGGTTCGCACGCGGTTCATTCCCT TCAACAAACTCCACTCCAACTGGGACGGGTTCACGGTCACTCCGCCCTTCCAGGAGAATGATCTCGTTCATGCCTGGAAC CGCATTCCCTTTGGCGCCCGCCGCTTCATCTGCTCCTTTGAAAGCTCCCTGCCGCGCGGCTATGGCTTTCCCAAGTCGAG CCTCCTGCTGAAGGTCATGCAGGGCGCCATCGAGAGCAAACACTGCCGGCGCCTGGTTGCGATGTCGCATTATGCCCGCC GCAAGTTCGAGTTCAAACACCAGCACCGCGAGAGCTTCCCGGAGCTGAAATCCAAACTCATGGTGCGCCACCCCAACGTG TTCCTGAGCGACAAGCCCGACGCGCTGGCCGATGACGATTGCAAGACCCTGACGGTCACGTTCGTCGGCTCACATTTCGG CCGCAAGGGCGGCGCCGCCTGCGTGCGCGCCGCTGAGCTGGCGCTGGAGCGCGGCCTGCCGATCCGGTTCAACATTGTTT CTTCGCTGGTTGCGGGGGAAAGCGTCTGGTTCGATACGACCGTACCCGGATTTTTCGACCCATATTTCCGCCTGCTCGAC CTGCCCAATGTCAACCACATCAACAGCCTCGGAAATGACAGCGTCCGCGTCCTCATGCGCGCCTCCCATTTCACCCTGCT GCCAACGCTGGGCGACACATTCGGCTACTCCATGATCGAGTCGATGGCCGAGCATACGCCCGTCATCGCCACGAACATCT GCGCAGTGCCCGAAGTGGTGATGGACGGCTTCAATGGCTGCCTGCTCAATCTCGACAAGACCCCGCGCGGAGACTGGAAC TCGCTCGGCTATGAAGCGCGCGGCACCGAAGCCTATGCCACCCAGTACCGCGACGCGACCGAAGACGTCGCCCAGCAGCT CGTCGCCAAGCTGGCAGAGCTGGTCGGCCAGCCGGAAACCATCCACCGCATGCGCCGCAACGCCCGCCTCACGGCCGAAC AGATGTTCTCCGCCTCCAGCCAGAGCCCGCTCTGGGACGATCTCTATGACCGCGTTGCCGCAGAAGACCTGAACTCCCGG CCCTTTGCAGACCCCGCAATCGACATCTCTTCCCCCGAAAGCCCCGCCCACCTCCTCGGCGACGCTGCAAGATAA
Upstream 100 bases:
>100_bases ACAAAAGGAAAGAATTCCCAGGCCGCGAGCTTCTGGAGTGCCTGCTGGCGCAAAATTTGCTGTGATTGGAGCGTCTTAAC AGTTTTTGGAGGTCAGCAGT
Downstream 100 bases:
>100_bases CCCTGACGCAGGGTGACGGCTGTTAGGCGCCGTCAATCACGGTTAGATTCCTTCTCGAATGGACGAGATGCGACGGGCAA AGATCCCGCGCGCCGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MHDQAQNSSSIKDSAAPEEARCLKVMVYRDRYPTAFMTPRISRHEMVRTRFIPFNKLHSNWDGFTVTPPFQENDLVHAWN RIPFGARRFICSFESSLPRGYGFPKSSLLLKVMQGAIESKHCRRLVAMSHYARRKFEFKHQHRESFPELKSKLMVRHPNV FLSDKPDALADDDCKTLTVTFVGSHFGRKGGAACVRAAELALERGLPIRFNIVSSLVAGESVWFDTTVPGFFDPYFRLLD LPNVNHINSLGNDSVRVLMRASHFTLLPTLGDTFGYSMIESMAEHTPVIATNICAVPEVVMDGFNGCLLNLDKTPRGDWN SLGYEARGTEAYATQYRDATEDVAQQLVAKLAELVGQPETIHRMRRNARLTAEQMFSASSQSPLWDDLYDRVAAEDLNSR PFADPAIDISSPESPAHLLGDAAR
Sequences:
>Translated_424_residues MHDQAQNSSSIKDSAAPEEARCLKVMVYRDRYPTAFMTPRISRHEMVRTRFIPFNKLHSNWDGFTVTPPFQENDLVHAWN RIPFGARRFICSFESSLPRGYGFPKSSLLLKVMQGAIESKHCRRLVAMSHYARRKFEFKHQHRESFPELKSKLMVRHPNV FLSDKPDALADDDCKTLTVTFVGSHFGRKGGAACVRAAELALERGLPIRFNIVSSLVAGESVWFDTTVPGFFDPYFRLLD LPNVNHINSLGNDSVRVLMRASHFTLLPTLGDTFGYSMIESMAEHTPVIATNICAVPEVVMDGFNGCLLNLDKTPRGDWN SLGYEARGTEAYATQYRDATEDVAQQLVAKLAELVGQPETIHRMRRNARLTAEQMFSASSQSPLWDDLYDRVAAEDLNSR PFADPAIDISSPESPAHLLGDAAR >Mature_424_residues MHDQAQNSSSIKDSAAPEEARCLKVMVYRDRYPTAFMTPRISRHEMVRTRFIPFNKLHSNWDGFTVTPPFQENDLVHAWN RIPFGARRFICSFESSLPRGYGFPKSSLLLKVMQGAIESKHCRRLVAMSHYARRKFEFKHQHRESFPELKSKLMVRHPNV FLSDKPDALADDDCKTLTVTFVGSHFGRKGGAACVRAAELALERGLPIRFNIVSSLVAGESVWFDTTVPGFFDPYFRLLD LPNVNHINSLGNDSVRVLMRASHFTLLPTLGDTFGYSMIESMAEHTPVIATNICAVPEVVMDGFNGCLLNLDKTPRGDWN SLGYEARGTEAYATQYRDATEDVAQQLVAKLAELVGQPETIHRMRRNARLTAEQMFSASSQSPLWDDLYDRVAAEDLNSR PFADPAIDISSPESPAHLLGDAAR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47715; Mature: 47715
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDQAQNSSSIKDSAAPEEARCLKVMVYRDRYPTAFMTPRISRHEMVRTRFIPFNKLHSN CCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCC WDGFTVTPPFQENDLVHAWNRIPFGARRFICSFESSLPRGYGFPKSSLLLKVMQGAIESK CCCEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH HCRRLVAMSHYARRKFEFKHQHRESFPELKSKLMVRHPNVFLSDKPDALADDDCKTLTVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEE FVGSHFGRKGGAACVRAAELALERGLPIRFNIVSSLVAGESVWFDTTVPGFFDPYFRLLD EECHHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEECCCCCCHHHHHHHHHC LPNVNHINSLGNDSVRVLMRASHFTLLPTLGDTFGYSMIESMAEHTPVIATNICAVPEVV CCCCCHHHHCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MDGFNGCLLNLDKTPRGDWNSLGYEARGTEAYATQYRDATEDVAQQLVAKLAELVGQPET HCCCCCEEEECCCCCCCCCHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH IHRMRRNARLTAEQMFSASSQSPLWDDLYDRVAAEDLNSRPFADPAIDISSPESPAHLLG HHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHC DAAR CCCC >Mature Secondary Structure MHDQAQNSSSIKDSAAPEEARCLKVMVYRDRYPTAFMTPRISRHEMVRTRFIPFNKLHSN CCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCC WDGFTVTPPFQENDLVHAWNRIPFGARRFICSFESSLPRGYGFPKSSLLLKVMQGAIESK CCCEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH HCRRLVAMSHYARRKFEFKHQHRESFPELKSKLMVRHPNVFLSDKPDALADDDCKTLTVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEE FVGSHFGRKGGAACVRAAELALERGLPIRFNIVSSLVAGESVWFDTTVPGFFDPYFRLLD EECHHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEECCCCCCHHHHHHHHHC LPNVNHINSLGNDSVRVLMRASHFTLLPTLGDTFGYSMIESMAEHTPVIATNICAVPEVV CCCCCHHHHCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MDGFNGCLLNLDKTPRGDWNSLGYEARGTEAYATQYRDATEDVAQQLVAKLAELVGQPET HCCCCCEEEECCCCCCCCCHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH IHRMRRNARLTAEQMFSASSQSPLWDDLYDRVAAEDLNSRPFADPAIDISSPESPAHLLG HHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHC DAAR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA