| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799228
Identifier: 114799228
GI number: 114799228
Start: 1323867
End: 1324346
Strand: Reverse
Name: 114799228
Synonym: HNE_1291
Alternate gene names: NA
Gene position: 1324346-1323867 (Counterclockwise)
Preceding gene: 114799524
Following gene: 114799598
Centisome position: 35.74
GC content: 67.92
Gene sequence:
>480_bases ATGACCAGCCTCCGCATCCTCGCCCTCGCTGCGGCCGCCTGCGCCGCCCTCGCCGCCTGCCAGACCCCGGCGGCCGAAAC GCCTGCGCTCGCCCCGCCGGCCTCCGAAGTCCCTGTAGTTGTTGGAGAAACACCCGTGGCCGATGCCTGCGCCGTGCGCG ACTCGCGCGATTGGGAAGCCTGGGTCAACCGCATGCCCGGCCCCGACGCCACCCCCTCGGTCCACGTCACCGGCAAGGTC GACGTCCCAACCGGCGGTTACACCTTCGAATGGGAAGTCGGCCCGATGGATCGCTCGATGACCCCCGCGCTCAAGCTCGA ACTTATCCCCGTAAAACCCGATGGCATGGCCACCATGGCGATCACCACCGAGGACGTGCACTACATGGGGCCCGTCGCCG GCTCTGCCTATCGCAGCATCACCATCACCTGCGGTGGCGAAACCCTCGTGGAAATCACCGACATCCCCGACGCCGTCTAG
Upstream 100 bases:
>100_bases TCCGGTTTTGTCCGGATTTGTCCCGAACTGTCCTCAAATTGACACGGAATGTGTGAGATAGAGGCAGGATCATGCAGACA TGTGTCAAAGGGAAAACATC
Downstream 100 bases:
>100_bases GTTTTTCGGCCGGGCCGCGCGGCGGGGTCAGCCTGCCGCCGCGCGCGCCGGGGCCGTCTCGGCCAGCGTAAAGCCGCTCT CACCATGTACCGCCAGCTGG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTSLRILALAAAACAALAACQTPAAETPALAPPASEVPVVVGETPVADACAVRDSRDWEAWVNRMPGPDATPSVHVTGKV DVPTGGYTFEWEVGPMDRSMTPALKLELIPVKPDGMATMAITTEDVHYMGPVAGSAYRSITITCGGETLVEITDIPDAV
Sequences:
>Translated_159_residues MTSLRILALAAAACAALAACQTPAAETPALAPPASEVPVVVGETPVADACAVRDSRDWEAWVNRMPGPDATPSVHVTGKV DVPTGGYTFEWEVGPMDRSMTPALKLELIPVKPDGMATMAITTEDVHYMGPVAGSAYRSITITCGGETLVEITDIPDAV >Mature_158_residues TSLRILALAAAACAALAACQTPAAETPALAPPASEVPVVVGETPVADACAVRDSRDWEAWVNRMPGPDATPSVHVTGKVD VPTGGYTFEWEVGPMDRSMTPALKLELIPVKPDGMATMAITTEDVHYMGPVAGSAYRSITITCGGETLVEITDIPDAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16506; Mature: 16375
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLRILALAAAACAALAACQTPAAETPALAPPASEVPVVVGETPVADACAVRDSRDWEA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCHHH WVNRMPGPDATPSVHVTGKVDVPTGGYTFEWEVGPMDRSMTPALKLELIPVKPDGMATMA HHHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEE ITTEDVHYMGPVAGSAYRSITITCGGETLVEITDIPDAV EEECCCEEECCCCCCCEEEEEEEECCCEEEEEECCCCCC >Mature Secondary Structure TSLRILALAAAACAALAACQTPAAETPALAPPASEVPVVVGETPVADACAVRDSRDWEA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCHHH WVNRMPGPDATPSVHVTGKVDVPTGGYTFEWEVGPMDRSMTPALKLELIPVKPDGMATMA HHHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEE ITTEDVHYMGPVAGSAYRSITITCGGETLVEITDIPDAV EEECCCEEECCCCCCCEEEEEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA