Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114799555

Identifier: 114799555

GI number: 114799555

Start: 1226223

End: 1226834

Strand: Reverse

Name: 114799555

Synonym: HNE_1207

Alternate gene names: NA

Gene position: 1226834-1226223 (Counterclockwise)

Preceding gene: 114799623

Following gene: 114800478

Centisome position: 33.11

GC content: 62.75

Gene sequence:

>612_bases
GTGGAAGAGGCGCATGAGGCTTATCTGCGAGACAATGACCTGCAACTGACCCGTCCGGAGCAGGAAGACATTGAAATAGA
ACCGACAGAACCGCCAGACTGGTTGCAGGCGTTTGCCCGGTTCATTGAATCGCTAGCGCCCGTCTTCAAGATCATTTTCT
GGGCTGGCGTGGTGCTCGTCGTGGCAGGCCTCGTTTATTTCCTGTTCGGCGAAGCCATCCGGATGCGCCTCGGTTTCTCG
CGCAAACCCAAGGATAAGCCCACAGATGATGTGTTGACCGACATCCGGCCCGACGCGGACCGTGCCCGCTCCCTGCTGGA
GGAAGCCGACGCGCTGGCACGGGAGGGGCGGTTTGCAGAGGCGGTTCACCTGCTGCTGTTCCGGTCTATTGAAGACGTTC
AGGAGCGGCTGGATGGCGGCGTGCCCACCTCGCTGACCGCGCGGGAGATTGCCGGGCTTGGCAGCCTGCCTGACCGCGCC
CGGCGGGCGCTGAGGCCTATCATTCAGATCGTTGAGAGCAGCTTCTTCGGCGGGCGGGATGTCGATGCTGACGGCTGGCA
GAGCGCGCGGCGCAGCTATGAAGACTTCGCCTTCGGGGAGGGCTGGGCATGA

Upstream 100 bases:

>100_bases
GGAACCTGACTACACCTACGATCCCGCGCCTGAATTCTACGACGATGCCGAGTTTGACGAGACCTTCTCCGGGGGCGGGC
TGGAGACCGACACTGGCCTC

Downstream 100 bases:

>100_bases
GTGGGGCAAGCGACTCCCCCTTTTCGGCCCGCGCGGTGGCCATCATGGTGGCAATCGCCGTGATCTCGTTTGGCGGCGTG
ATGGTGCTGGCGGGCTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MEEAHEAYLRDNDLQLTRPEQEDIEIEPTEPPDWLQAFARFIESLAPVFKIIFWAGVVLVVAGLVYFLFGEAIRMRLGFS
RKPKDKPTDDVLTDIRPDADRARSLLEEADALAREGRFAEAVHLLLFRSIEDVQERLDGGVPTSLTAREIAGLGSLPDRA
RRALRPIIQIVESSFFGGRDVDADGWQSARRSYEDFAFGEGWA

Sequences:

>Translated_203_residues
MEEAHEAYLRDNDLQLTRPEQEDIEIEPTEPPDWLQAFARFIESLAPVFKIIFWAGVVLVVAGLVYFLFGEAIRMRLGFS
RKPKDKPTDDVLTDIRPDADRARSLLEEADALAREGRFAEAVHLLLFRSIEDVQERLDGGVPTSLTAREIAGLGSLPDRA
RRALRPIIQIVESSFFGGRDVDADGWQSARRSYEDFAFGEGWA
>Mature_203_residues
MEEAHEAYLRDNDLQLTRPEQEDIEIEPTEPPDWLQAFARFIESLAPVFKIIFWAGVVLVVAGLVYFLFGEAIRMRLGFS
RKPKDKPTDDVLTDIRPDADRARSLLEEADALAREGRFAEAVHLLLFRSIEDVQERLDGGVPTSLTAREIAGLGSLPDRA
RRALRPIIQIVESSFFGGRDVDADGWQSARRSYEDFAFGEGWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22935; Mature: 22935

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEAHEAYLRDNDLQLTRPEQEDIEIEPTEPPDWLQAFARFIESLAPVFKIIFWAGVVLV
CCCHHHHHHCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGLVYFLFGEAIRMRLGFSRKPKDKPTDDVLTDIRPDADRARSLLEEADALAREGRFAE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHH
AVHLLLFRSIEDVQERLDGGVPTSLTAREIAGLGSLPDRARRALRPIIQIVESSFFGGRD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
VDADGWQSARRSYEDFAFGEGWA
CCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEEAHEAYLRDNDLQLTRPEQEDIEIEPTEPPDWLQAFARFIESLAPVFKIIFWAGVVLV
CCCHHHHHHCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGLVYFLFGEAIRMRLGFSRKPKDKPTDDVLTDIRPDADRARSLLEEADALAREGRFAE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHH
AVHLLLFRSIEDVQERLDGGVPTSLTAREIAGLGSLPDRARRALRPIIQIVESSFFGGRD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
VDADGWQSARRSYEDFAFGEGWA
CCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA