| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800478
Identifier: 114800478
GI number: 114800478
Start: 1225006
End: 1226226
Strand: Reverse
Name: 114800478
Synonym: HNE_1206
Alternate gene names: NA
Gene position: 1226226-1225006 (Counterclockwise)
Preceding gene: 114799555
Following gene: 114797075
Centisome position: 33.1
GC content: 63.23
Gene sequence:
>1221_bases ATGAGTGGGGCAAGCGACTCCCCCTTTTCGGCCCGCGCGGTGGCCATCATGGTGGCAATCGCCGTGATCTCGTTTGGCGG CGTGATGGTGCTGGCGGGCTGGGCGCCCGAGCTGCGCCAGCGCGATCAGGCGGGCGATCATCCCTACTCCACATCTGCGC TGGGATATAACGGCTTTGTGCGCCTGATGGAGGCGCAGGGTTATCCCGTCAGCGTCTCCCGGCTGGAGCGCAGCCTTGAG ACGCGGGATTGGGGACTGATGATCCTCACCCTGCCAGCCTATGGCAATCTCGATATTCTGGAGGAAACAAGCTTCCAGCT ACCCGCGCTCGTTGTCCTGCCCAAATGGTATGGCAGCCCCGATGCGCTGAACCGGACACGGCAGATCGACACGCGGTTCC TTGATGCGCGCAACCTGAACGACCGCTTGCGGGAGGTTTATCCGGACGCGGAAGTGGCACGCGTCAGTGTTTCCCTGGAG CTGGAGGGTGATTTCGAGCCCGGCGCCGTAAAGCCGGATGTGCGTCTGCAGCTGATCCGGTCCGACATTCTTGAAACCGT CATCGGGAACGAACAAGGCGCGCTGGTGTCCTATGATCCCGGCCGGGGGATCTATATCCTCAGCGATCCGGACATGATCA ACACATTCGGCCTGGCCCGGCTGGAGAACGCCATCTTTGCCACGCGGCTGGTCAACTATTTGCGCACGTCGGACGCCGAA CCGATCCTGATGGACGCGACGCTGCATGGTTTTGAACGCTCGGAAAACCTGCTCAAGATGCTGTTCAGCGTTCCCTATAT CGGGGCGACGCTGGTGGCGCTGGCGAGCGCGCTGTTGCTGGGCTGGGCCGCGCTCATCCGGTTTGGCCCGCCAGCCCGGG AGACGCGCGCCATTGCGCTTGGCAAACAGGCACTGGCCGACAACTCAGCCGGCCTGGTGACCATGGCGCGCCGTGAGATG CGGATGGCGCCGGGCTATGCGAGCCTGATCCGCCGCCGTCTGGCGCGGGCGCTCGGCTTGCCGCGAACGCTGCCGGATAG TCAGCTGACGGAAATGTTTGACCGGATGGGACCTGCCGAAAGCGGCGGAAAATCCTTCTCGGAACTCGAAACCGCCCTCA AGGGGCAAGCCGCCAACCGGGACGATCTCGTGCACAAGGCACGCGACCTCTACCATTGGCGCAAGGCAATCATCAGGAGA ACGATGCATGAGCGTGGCTGA
Upstream 100 bases:
>100_bases TCGTTGAGAGCAGCTTCTTCGGCGGGCGGGATGTCGATGCTGACGGCTGGCAGAGCGCGCGGCGCAGCTATGAAGACTTC GCCTTCGGGGAGGGCTGGGC
Downstream 100 bases:
>100_bases AATCCGGAACCTGGCGGACCGCATCCGCACCGAAGTGCGAAAGGCCATCATCGGCCAGGACGCGAGCGTTGACCTGCTGC TGGTGGCGTTGTTTTCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSGASDSPFSARAVAIMVAIAVISFGGVMVLAGWAPELRQRDQAGDHPYSTSALGYNGFVRLMEAQGYPVSVSRLERSLE TRDWGLMILTLPAYGNLDILEETSFQLPALVVLPKWYGSPDALNRTRQIDTRFLDARNLNDRLREVYPDAEVARVSVSLE LEGDFEPGAVKPDVRLQLIRSDILETVIGNEQGALVSYDPGRGIYILSDPDMINTFGLARLENAIFATRLVNYLRTSDAE PILMDATLHGFERSENLLKMLFSVPYIGATLVALASALLLGWAALIRFGPPARETRAIALGKQALADNSAGLVTMARREM RMAPGYASLIRRRLARALGLPRTLPDSQLTEMFDRMGPAESGGKSFSELETALKGQAANRDDLVHKARDLYHWRKAIIRR TMHERG
Sequences:
>Translated_406_residues MSGASDSPFSARAVAIMVAIAVISFGGVMVLAGWAPELRQRDQAGDHPYSTSALGYNGFVRLMEAQGYPVSVSRLERSLE TRDWGLMILTLPAYGNLDILEETSFQLPALVVLPKWYGSPDALNRTRQIDTRFLDARNLNDRLREVYPDAEVARVSVSLE LEGDFEPGAVKPDVRLQLIRSDILETVIGNEQGALVSYDPGRGIYILSDPDMINTFGLARLENAIFATRLVNYLRTSDAE PILMDATLHGFERSENLLKMLFSVPYIGATLVALASALLLGWAALIRFGPPARETRAIALGKQALADNSAGLVTMARREM RMAPGYASLIRRRLARALGLPRTLPDSQLTEMFDRMGPAESGGKSFSELETALKGQAANRDDLVHKARDLYHWRKAIIRR TMHERG >Mature_405_residues SGASDSPFSARAVAIMVAIAVISFGGVMVLAGWAPELRQRDQAGDHPYSTSALGYNGFVRLMEAQGYPVSVSRLERSLET RDWGLMILTLPAYGNLDILEETSFQLPALVVLPKWYGSPDALNRTRQIDTRFLDARNLNDRLREVYPDAEVARVSVSLEL EGDFEPGAVKPDVRLQLIRSDILETVIGNEQGALVSYDPGRGIYILSDPDMINTFGLARLENAIFATRLVNYLRTSDAEP ILMDATLHGFERSENLLKMLFSVPYIGATLVALASALLLGWAALIRFGPPARETRAIALGKQALADNSAGLVTMARREMR MAPGYASLIRRRLARALGLPRTLPDSQLTEMFDRMGPAESGGKSFSELETALKGQAANRDDLVHKARDLYHWRKAIIRRT MHERG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44832; Mature: 44701
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGASDSPFSARAVAIMVAIAVISFGGVMVLAGWAPELRQRDQAGDHPYSTSALGYNGFV CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCHHE RLMEAQGYPVSVSRLERSLETRDWGLMILTLPAYGNLDILEETSFQLPALVVLPKWYGSP EEEECCCCCEEHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCH DALNRTRQIDTRFLDARNLNDRLREVYPDAEVARVSVSLELEGDFEPGAVKPDVRLQLIR HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHH SDILETVIGNEQGALVSYDPGRGIYILSDPDMINTFGLARLENAIFATRLVNYLRTSDAE HHHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PILMDATLHGFERSENLLKMLFSVPYIGATLVALASALLLGWAALIRFGPPARETRAIAL CEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GKQALADNSAGLVTMARREMRMAPGYASLIRRRLARALGLPRTLPDSQLTEMFDRMGPAE HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC SGGKSFSELETALKGQAANRDDLVHKARDLYHWRKAIIRRTMHERG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGASDSPFSARAVAIMVAIAVISFGGVMVLAGWAPELRQRDQAGDHPYSTSALGYNGFV CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCHHE RLMEAQGYPVSVSRLERSLETRDWGLMILTLPAYGNLDILEETSFQLPALVVLPKWYGSP EEEECCCCCEEHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCH DALNRTRQIDTRFLDARNLNDRLREVYPDAEVARVSVSLELEGDFEPGAVKPDVRLQLIR HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHH SDILETVIGNEQGALVSYDPGRGIYILSDPDMINTFGLARLENAIFATRLVNYLRTSDAE HHHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PILMDATLHGFERSENLLKMLFSVPYIGATLVALASALLLGWAALIRFGPPARETRAIAL CEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GKQALADNSAGLVTMARREMRMAPGYASLIRRRLARALGLPRTLPDSQLTEMFDRMGPAE HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC SGGKSFSELETALKGQAANRDDLVHKARDLYHWRKAIIRRTMHERG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA