| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799386
Identifier: 114799386
GI number: 114799386
Start: 1280623
End: 1281903
Strand: Reverse
Name: 114799386
Synonym: HNE_1256
Alternate gene names: NA
Gene position: 1281903-1280623 (Counterclockwise)
Preceding gene: 114800521
Following gene: 114798613
Centisome position: 34.6
GC content: 62.76
Gene sequence:
>1281_bases ATGACGCGGGTTGCCCTCGAGCTTGGCAATATCCCCAGCCCCGCACGCGGAGAAGCTCAGGCTGCGGAATATGTCTATCA ATGGCTGGCGAAAGAAGGCTTCCGCCCCCGCAAGGTCGGCGCCACGCCCGAGCGTCCCAACATCATCGCCACCTATGGCG GCAAGGGCGATGGCAAAAGCCTCCTCTACACCGCCCATCTCGACACCGAGAGCCCCACCTGGAACCCGGACGAAGACGCC TACAAATTCCGCCCGGAAACACTCGAAGTGCGCGAGTGGAATGAATGCTGGCTGGAAGACGGCGCCTTCCATGGCTTCCC CATCGCTAATGATCGCGGCCCGATGACCTGCTTTCTCTTTGCGGCAAAGGCCCTGAAGCAATGCGGCTTCGACCTCGCGG GCCGCCTCTATCTCACCGCCTCGCCCGGCGAAATTGGCCCGGAACCCATCGAGGAAGCCCGCGGCATCGATTTCATGGGC AAGGAAATCGGCACGCATTACGTCTTCAATCATGGCGGCGTCTCGCCAGACTATGCGATCGCCGCTGAAGGCTGCGACTA TGGGCTCACCTGGGTAGGCTGTGGTTATACGGTCTTCCGTATACGTCTTTATGGCGAAGCAATCTTCACGCCCCTCCTCA CCTCCCCAAAGAACGCGGCTCAACATCCCAACCCCATCTACCGTATGGGCGCCGCCATCCAGCCGATCCTCGACTGGAGC CTGAAATTCGAGGCCGAAAGCCGCTACGAATCCGAAGGCGGCTCCGCCTTTCCAAAAGCCCAGCTCTCCGCCGTGCGCGG CGGCGTGCCCCATGCCTTTGGCGCGGGCACGGAAGTCTGCGCGCTCTATCTGGAAGTCGGCCTCGCCCCCAATCAGGAAA TCGGCGCCGTCCATCGCAGCCTTGAGAAATACCTGCGCGAGGCAAACATCGGCGAGTTCGATGTCGAACCCGTCGTCGTC CGCCATGGCTTTGAGGCAGACGCCGGCAAGGTCGCCCCGCTGGTCAGCGCCGTTGATGCCGCCACACGCCTCTCGCTCGG CAAGCCGGTCGAGCGTGCCGCGCCTGTCTATTCCAGCATGTGGCGCGACCATAACGTGTTCAACATGAACCGCGTGCCCG CCATCACCACCGGCTTCAAGCGCTGGCGCCCAACGCCGGATGATCTGGCCAAGAGCGCGCTCATCTACGCCCTCACCGCC CTCGCCCTTTGCGGCAAGGTGGACAATGCAGCCGAAACCGCGCGCGCAAAGCCCGTATACGGCGACAATCCCTTCAGCTG A
Upstream 100 bases:
>100_bases TGTCCCCATGAGTAACGTGTTCACGAATTTGCCCGAGGCGAACTATATCGTCACGGAAGAAGATGCCGCCGCCCTCGCCG CCGCTATCGACAAGGAGGAG
Downstream 100 bases:
>100_bases CGGAAGGATTCAGAATATGACACCTCCCATCGACACAGCTCTCTGGCGCGAAGCCATGGGCGGTTTCCTCACCGGCGTCA CAGTCGTTACCACGCTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTRVALELGNIPSPARGEAQAAEYVYQWLAKEGFRPRKVGATPERPNIIATYGGKGDGKSLLYTAHLDTESPTWNPDEDA YKFRPETLEVREWNECWLEDGAFHGFPIANDRGPMTCFLFAAKALKQCGFDLAGRLYLTASPGEIGPEPIEEARGIDFMG KEIGTHYVFNHGGVSPDYAIAAEGCDYGLTWVGCGYTVFRIRLYGEAIFTPLLTSPKNAAQHPNPIYRMGAAIQPILDWS LKFEAESRYESEGGSAFPKAQLSAVRGGVPHAFGAGTEVCALYLEVGLAPNQEIGAVHRSLEKYLREANIGEFDVEPVVV RHGFEADAGKVAPLVSAVDAATRLSLGKPVERAAPVYSSMWRDHNVFNMNRVPAITTGFKRWRPTPDDLAKSALIYALTA LALCGKVDNAAETARAKPVYGDNPFS
Sequences:
>Translated_426_residues MTRVALELGNIPSPARGEAQAAEYVYQWLAKEGFRPRKVGATPERPNIIATYGGKGDGKSLLYTAHLDTESPTWNPDEDA YKFRPETLEVREWNECWLEDGAFHGFPIANDRGPMTCFLFAAKALKQCGFDLAGRLYLTASPGEIGPEPIEEARGIDFMG KEIGTHYVFNHGGVSPDYAIAAEGCDYGLTWVGCGYTVFRIRLYGEAIFTPLLTSPKNAAQHPNPIYRMGAAIQPILDWS LKFEAESRYESEGGSAFPKAQLSAVRGGVPHAFGAGTEVCALYLEVGLAPNQEIGAVHRSLEKYLREANIGEFDVEPVVV RHGFEADAGKVAPLVSAVDAATRLSLGKPVERAAPVYSSMWRDHNVFNMNRVPAITTGFKRWRPTPDDLAKSALIYALTA LALCGKVDNAAETARAKPVYGDNPFS >Mature_425_residues TRVALELGNIPSPARGEAQAAEYVYQWLAKEGFRPRKVGATPERPNIIATYGGKGDGKSLLYTAHLDTESPTWNPDEDAY KFRPETLEVREWNECWLEDGAFHGFPIANDRGPMTCFLFAAKALKQCGFDLAGRLYLTASPGEIGPEPIEEARGIDFMGK EIGTHYVFNHGGVSPDYAIAAEGCDYGLTWVGCGYTVFRIRLYGEAIFTPLLTSPKNAAQHPNPIYRMGAAIQPILDWSL KFEAESRYESEGGSAFPKAQLSAVRGGVPHAFGAGTEVCALYLEVGLAPNQEIGAVHRSLEKYLREANIGEFDVEPVVVR HGFEADAGKVAPLVSAVDAATRLSLGKPVERAAPVYSSMWRDHNVFNMNRVPAITTGFKRWRPTPDDLAKSALIYALTAL ALCGKVDNAAETARAKPVYGDNPFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46480; Mature: 46349
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVALELGNIPSPARGEAQAAEYVYQWLAKEGFRPRKVGATPERPNIIATYGGKGDGKS CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCE LLYTAHLDTESPTWNPDEDAYKFRPETLEVREWNECWLEDGAFHGFPIANDRGPMTCFLF EEEEEEECCCCCCCCCCCCCEEECCCEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH AAKALKQCGFDLAGRLYLTASPGEIGPEPIEEARGIDFMGKEIGTHYVFNHGGVSPDYAI HHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHCCEEEEECCCCCCCCEE AAEGCDYGLTWVGCGYTVFRIRLYGEAIFTPLLTSPKNAAQHPNPIYRMGAAIQPILDWS EECCCCCCCEEEECCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHCCE LKFEAESRYESEGGSAFPKAQLSAVRGGVPHAFGAGTEVCALYLEVGLAPNQEIGAVHRS EEECHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH LEKYLREANIGEFDVEPVVVRHGFEADAGKVAPLVSAVDAATRLSLGKPVERAAPVYSSM HHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH WRDHNVFNMNRVPAITTGFKRWRPTPDDLAKSALIYALTALALCGKVDNAAETARAKPVY HCCCCCCCCCCCCCHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC GDNPFS CCCCCC >Mature Secondary Structure TRVALELGNIPSPARGEAQAAEYVYQWLAKEGFRPRKVGATPERPNIIATYGGKGDGKS CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCE LLYTAHLDTESPTWNPDEDAYKFRPETLEVREWNECWLEDGAFHGFPIANDRGPMTCFLF EEEEEEECCCCCCCCCCCCCEEECCCEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH AAKALKQCGFDLAGRLYLTASPGEIGPEPIEEARGIDFMGKEIGTHYVFNHGGVSPDYAI HHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHCCEEEEECCCCCCCCEE AAEGCDYGLTWVGCGYTVFRIRLYGEAIFTPLLTSPKNAAQHPNPIYRMGAAIQPILDWS EECCCCCCCEEEECCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHCCE LKFEAESRYESEGGSAFPKAQLSAVRGGVPHAFGAGTEVCALYLEVGLAPNQEIGAVHRS EEECHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH LEKYLREANIGEFDVEPVVVRHGFEADAGKVAPLVSAVDAATRLSLGKPVERAAPVYSSM HHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH WRDHNVFNMNRVPAITTGFKRWRPTPDDLAKSALIYALTALALCGKVDNAAETARAKPVY HCCCCCCCCCCCCCHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC GDNPFS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA