| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is mhpC [H]
Identifier: 114799337
GI number: 114799337
Start: 3529672
End: 3530499
Strand: Direct
Name: mhpC [H]
Synonym: HNE_3382
Alternate gene names: 114799337
Gene position: 3529672-3530499 (Clockwise)
Preceding gene: 114798760
Following gene: 114798838
Centisome position: 95.27
GC content: 65.34
Gene sequence:
>828_bases ATGGCCCGCATACGCGCCAACGGGGTTGAACTTGAATACGAAACGATGGGCAATCCCGGCGATCCGGCCGTCCTGCTGAT CATGGGCTTTGCCTTTCAGATGACGCGCTGGCCCGAAGCCTTCCGGCGCAGCCTGGCGGAGGCCGGCTTCCACGTTATCT GGTTCGATAACCGCGACATTGGACTTTCCGCCGAGATGGGCGGCCTCGCCACCTACACGCTGAATGACCTGGCTGCCGAT GCCGCCGGGCTGCTTGATGCCCTCGGCATTGCGCGGGCCCATATTGTCGGCATGTCGATGGGCGGCATGATCGCCCAGCT GATAGCGCTCGATCATCCGCGCAAGGTGGACAAGCTCGTCGCCATGATGACGTCGTCTGGCGCGCCAAACCTGCCGCCAC CGACGCAGGAGGCGCTTGCCGCGCTGACCGCGATGCCGATGCAGCGCACCCCCGAAGCCATTGCGGACATCGCAGTGAAA GCCCAGCATGCCATCGGCTCCGCACCGAATTTGCGCAACAGCGCCGAGGTGATCCGCCAGAACGCCATCGACGATTTCCG CCGCTCCGACCGGCCTTTCGGCGTCATCCGTCAGTTCACGGCTATTCAAGCCCAGCCCCGCTGGCATGAACGCCTCGGCA GCATCACGCGGCCCACGCTCGTTCTCCACGGCGCAGACGACCCGCTCGTCCGCCCGGCGGCCGGCGAAGACATCGCCCGG CGCATCCCCGGCGCCCGCTTCAAGGCGTTCCCAGGCTGGGGCCATGATCTCGCCGACGCCATGTCAGAAACGCTGGCAAA CGAGATCACGGCCTTCCTGAAGGCATAA
Upstream 100 bases:
>100_bases ACGGGGCGGCGTTTTTCTTTGCCTCCACGGCATGCTTGATCTTGGCGTCACCGCCCCTACTGTCCGCCCCGAAGCGGCAA CAGGACCGGGGGGAAGTACT
Downstream 100 bases:
>100_bases TCCGCTAGCGGATGGCTACCGGATTGACGATGGCCTGCACCGCCCCCTCAAGGCGCGGCGCGCCGAGCGTGAAGAAGAAC TCGGTCGCCCCGTCAGCGGC
Product: alpha/beta fold family hydrolase
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MARIRANGVELEYETMGNPGDPAVLLIMGFAFQMTRWPEAFRRSLAEAGFHVIWFDNRDIGLSAEMGGLATYTLNDLAAD AAGLLDALGIARAHIVGMSMGGMIAQLIALDHPRKVDKLVAMMTSSGAPNLPPPTQEALAALTAMPMQRTPEAIADIAVK AQHAIGSAPNLRNSAEVIRQNAIDDFRRSDRPFGVIRQFTAIQAQPRWHERLGSITRPTLVLHGADDPLVRPAAGEDIAR RIPGARFKAFPGWGHDLADAMSETLANEITAFLKA
Sequences:
>Translated_275_residues MARIRANGVELEYETMGNPGDPAVLLIMGFAFQMTRWPEAFRRSLAEAGFHVIWFDNRDIGLSAEMGGLATYTLNDLAAD AAGLLDALGIARAHIVGMSMGGMIAQLIALDHPRKVDKLVAMMTSSGAPNLPPPTQEALAALTAMPMQRTPEAIADIAVK AQHAIGSAPNLRNSAEVIRQNAIDDFRRSDRPFGVIRQFTAIQAQPRWHERLGSITRPTLVLHGADDPLVRPAAGEDIAR RIPGARFKAFPGWGHDLADAMSETLANEITAFLKA >Mature_274_residues ARIRANGVELEYETMGNPGDPAVLLIMGFAFQMTRWPEAFRRSLAEAGFHVIWFDNRDIGLSAEMGGLATYTLNDLAADA AGLLDALGIARAHIVGMSMGGMIAQLIALDHPRKVDKLVAMMTSSGAPNLPPPTQEALAALTAMPMQRTPEAIADIAVKA QHAIGSAPNLRNSAEVIRQNAIDDFRRSDRPFGVIRQFTAIQAQPRWHERLGSITRPTLVLHGADDPLVRPAAGEDIARR IPGARFKAFPGWGHDLADAMSETLANEITAFLKA
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mhpC alpha/beta hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=259, Percent_Identity=28.957528957529, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 29723; Mature: 29591
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIRANGVELEYETMGNPGDPAVLLIMGFAFQMTRWPEAFRRSLAEAGFHVIWFDNRDI CCCEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC GLSAEMGGLATYTLNDLAADAAGLLDALGIARAHIVGMSMGGMIAQLIALDHPRKVDKLV CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AMMTSSGAPNLPPPTQEALAALTAMPMQRTPEAIADIAVKAQHAIGSAPNLRNSAEVIRQ HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH NAIDDFRRSDRPFGVIRQFTAIQAQPRWHERLGSITRPTLVLHGADDPLVRPAAGEDIAR HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHH RIPGARFKAFPGWGHDLADAMSETLANEITAFLKA HCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARIRANGVELEYETMGNPGDPAVLLIMGFAFQMTRWPEAFRRSLAEAGFHVIWFDNRDI CCEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC GLSAEMGGLATYTLNDLAADAAGLLDALGIARAHIVGMSMGGMIAQLIALDHPRKVDKLV CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AMMTSSGAPNLPPPTQEALAALTAMPMQRTPEAIADIAVKAQHAIGSAPNLRNSAEVIRQ HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH NAIDDFRRSDRPFGVIRQFTAIQAQPRWHERLGSITRPTLVLHGADDPLVRPAAGEDIAR HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHH RIPGARFKAFPGWGHDLADAMSETLANEITAFLKA HCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA