Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799275

Identifier: 114799275

GI number: 114799275

Start: 451215

End: 452753

Strand: Reverse

Name: 114799275

Synonym: HNE_0457

Alternate gene names: NA

Gene position: 452753-451215 (Counterclockwise)

Preceding gene: 114798549

Following gene: 114800491

Centisome position: 12.22

GC content: 61.27

Gene sequence:

>1539_bases
ATGATGCGCCTTTGCCGCCCAGTTACCCGTCTTCCCGCGCTGCGAAGCGCCGAGGGCGGGAATGTGGCGATGATTACGGC
CTTCGTGATCCCCTGCATTCTGGCGCTGACGGGCATCGCCATCGATCTGCAAAATACGGTGCGCCAGAAATCCAAGGTGC
AGGCAGCGCTCGACTCGGCCGTGCTGGCCGGCGCGCTGGGGCGGCAGGCGGGCAACACGGCCGCTGAAACCACGCTGGAC
GTGCAGACCTATGCGCTGGCGCTGTTCACAGATCAGGGCGGCGGGCTGGACTGTGATCCGGTGGCCGTGACCTTCGACGA
GACCAATCTCGACATTCTCGGAACCGTCCGCTGCCGCCAGCCGACCTATCTTTCCAGCCTGATCGGGCATGATGAGCTTG
AGTTCAATGTGGCGTCCACCTCGACCTATGGGGTGGGCAAGCTGGACGTTGCATTCATATTCGACGTGTCCGGATCAATG
AACAGCTATAACCGGCTGGCGCAGCTGAAAACGGCGGCCGTTGCAGCCGTTGACGAGTTGCTGCCCGACAGCCGGGAGCG
GGACGGAACGGTGCGCCTGGCGATTGCCAGCTATAATCATTCGCTGAATGCGGGCGCCTATATCGGCGCCGTGACCGAGA
CGGTGACACTCTCTGCCGACGGATCAAATTCCACGGCACTGAGCCGGTATAACAGCCACAATACCAAACGCATGATTGAC
CAGGACAGCGGCAAGCGCTTTTTCTACTATCAGAGCGGCACCTGTTCGAGCTGGAACTGCGGTAAGTATTCAAGCTGGAG
CTGGGATACCAAGCGCCGGTTTTTTGACGATACGGGGCTGGCAGACGCGTGCGTATATGAGCGCACGGGAACGCAGGCAG
CAACCGACGCCGCGCCCGGCAGCGGAGCCTGGATCGGGGCGGGCAATCCGCGCTGGAGTTTCTATGCCGGCAGCTCCAGC
AAGTATGATGGCTGGCAGAATGTCGAAAATCAGAACGCAACGGGTTATGGTGTGGGCGCCTATGAAGGCCGCCACGGCAC
CTGCATGCCGTCTGGCCCGGTGCCGCTGACCGAAGACAAGACGGTGCTGAAGGATCATGTGAACGCGCTGGTCGCCGAAG
GTGGCACCGCAGGCCATCTGGGCATCGCCTGGGGCTGGTATCTGGTATCGCCCGAATGGGCTGCCATCTGGCCCGAAGCG
TCCGAGCCCCTGCCCTATCGCCAGCCGCAGACGTCCAAGGCCGTCATCCTTATGACGGACGGGGATTTCAATATCGAGCA
TCCGACAGCTTCGCGGGACTCCTTCCGACAGTCGATGGATCTGTGCGACGGGATGAAAGCTTCGAGCCGGCGTATCCAGA
TTTATACGGTAGGCTTTCAGGTGCCTTCGAGTGTTCAGCGCACGGGCGACGGGCGCACCATCCTGGAATATTGCGCGACT
TCTCCCTCCCATGCCTTCAGCGCTGACAGCGGGGAGGAGCTGATCGAGGTGTATCGCTCGATTGCCCGCTCAATTTCCGA
TCTTCGCCTGAAGGAGTGA

Upstream 100 bases:

>100_bases
GACCGAAGCCTACAAGTCCATCGCCCGCTCCATCTCCGATCTGCGGATTTCGCGCTGACCGGATTTTGCAAAGCCCTTCT
GCCTAGAGAGCAGTGAGACA

Downstream 100 bases:

>100_bases
GCGCCGCCATTGCGGCCACCGCCGGGCACTGGCAGACGGGTAAACATGTTTTCCTGGTTGCCCAACGCCCTGACAATTTC
CCGCTGCGTATTCGCGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MMRLCRPVTRLPALRSAEGGNVAMITAFVIPCILALTGIAIDLQNTVRQKSKVQAALDSAVLAGALGRQAGNTAAETTLD
VQTYALALFTDQGGGLDCDPVAVTFDETNLDILGTVRCRQPTYLSSLIGHDELEFNVASTSTYGVGKLDVAFIFDVSGSM
NSYNRLAQLKTAAVAAVDELLPDSRERDGTVRLAIASYNHSLNAGAYIGAVTETVTLSADGSNSTALSRYNSHNTKRMID
QDSGKRFFYYQSGTCSSWNCGKYSSWSWDTKRRFFDDTGLADACVYERTGTQAATDAAPGSGAWIGAGNPRWSFYAGSSS
KYDGWQNVENQNATGYGVGAYEGRHGTCMPSGPVPLTEDKTVLKDHVNALVAEGGTAGHLGIAWGWYLVSPEWAAIWPEA
SEPLPYRQPQTSKAVILMTDGDFNIEHPTASRDSFRQSMDLCDGMKASSRRIQIYTVGFQVPSSVQRTGDGRTILEYCAT
SPSHAFSADSGEELIEVYRSIARSISDLRLKE

Sequences:

>Translated_512_residues
MMRLCRPVTRLPALRSAEGGNVAMITAFVIPCILALTGIAIDLQNTVRQKSKVQAALDSAVLAGALGRQAGNTAAETTLD
VQTYALALFTDQGGGLDCDPVAVTFDETNLDILGTVRCRQPTYLSSLIGHDELEFNVASTSTYGVGKLDVAFIFDVSGSM
NSYNRLAQLKTAAVAAVDELLPDSRERDGTVRLAIASYNHSLNAGAYIGAVTETVTLSADGSNSTALSRYNSHNTKRMID
QDSGKRFFYYQSGTCSSWNCGKYSSWSWDTKRRFFDDTGLADACVYERTGTQAATDAAPGSGAWIGAGNPRWSFYAGSSS
KYDGWQNVENQNATGYGVGAYEGRHGTCMPSGPVPLTEDKTVLKDHVNALVAEGGTAGHLGIAWGWYLVSPEWAAIWPEA
SEPLPYRQPQTSKAVILMTDGDFNIEHPTASRDSFRQSMDLCDGMKASSRRIQIYTVGFQVPSSVQRTGDGRTILEYCAT
SPSHAFSADSGEELIEVYRSIARSISDLRLKE
>Mature_512_residues
MMRLCRPVTRLPALRSAEGGNVAMITAFVIPCILALTGIAIDLQNTVRQKSKVQAALDSAVLAGALGRQAGNTAAETTLD
VQTYALALFTDQGGGLDCDPVAVTFDETNLDILGTVRCRQPTYLSSLIGHDELEFNVASTSTYGVGKLDVAFIFDVSGSM
NSYNRLAQLKTAAVAAVDELLPDSRERDGTVRLAIASYNHSLNAGAYIGAVTETVTLSADGSNSTALSRYNSHNTKRMID
QDSGKRFFYYQSGTCSSWNCGKYSSWSWDTKRRFFDDTGLADACVYERTGTQAATDAAPGSGAWIGAGNPRWSFYAGSSS
KYDGWQNVENQNATGYGVGAYEGRHGTCMPSGPVPLTEDKTVLKDHVNALVAEGGTAGHLGIAWGWYLVSPEWAAIWPEA
SEPLPYRQPQTSKAVILMTDGDFNIEHPTASRDSFRQSMDLCDGMKASSRRIQIYTVGFQVPSSVQRTGDGRTILEYCAT
SPSHAFSADSGEELIEVYRSIARSISDLRLKE

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55244; Mature: 55244

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRLCRPVTRLPALRSAEGGNVAMITAFVIPCILALTGIAIDLQNTVRQKSKVQAALDSA
CCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
VLAGALGRQAGNTAAETTLDVQTYALALFTDQGGGLDCDPVAVTFDETNLDILGTVRCRQ
HHHHHHHCCCCCCHHHEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECC
PTYLSSLIGHDELEFNVASTSTYGVGKLDVAFIFDVSGSMNSYNRLAQLKTAAVAAVDEL
CHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LPDSRERDGTVRLAIASYNHSLNAGAYIGAVTETVTLSADGSNSTALSRYNSHNTKRMID
CCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCEEHHHCCCCCHHHHC
QDSGKRFFYYQSGTCSSWNCGKYSSWSWDTKRRFFDDTGLADACVYERTGTQAATDAAPG
CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHEEEECCCCCCCCCCCCC
SGAWIGAGNPRWSFYAGSSSKYDGWQNVENQNATGYGVGAYEGRHGTCMPSGPVPLTEDK
CCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCH
TVLKDHVNALVAEGGTAGHLGIAWGWYLVSPEWAAIWPEASEPLPYRQPQTSKAVILMTD
HHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEEC
GDFNIEHPTASRDSFRQSMDLCDGMKASSRRIQIYTVGFQVPSSVQRTGDGRTILEYCAT
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHCCCCHHHHHHHCC
SPSHAFSADSGEELIEVYRSIARSISDLRLKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMRLCRPVTRLPALRSAEGGNVAMITAFVIPCILALTGIAIDLQNTVRQKSKVQAALDSA
CCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH
VLAGALGRQAGNTAAETTLDVQTYALALFTDQGGGLDCDPVAVTFDETNLDILGTVRCRQ
HHHHHHHCCCCCCHHHEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECC
PTYLSSLIGHDELEFNVASTSTYGVGKLDVAFIFDVSGSMNSYNRLAQLKTAAVAAVDEL
CHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LPDSRERDGTVRLAIASYNHSLNAGAYIGAVTETVTLSADGSNSTALSRYNSHNTKRMID
CCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCEEHHHCCCCCHHHHC
QDSGKRFFYYQSGTCSSWNCGKYSSWSWDTKRRFFDDTGLADACVYERTGTQAATDAAPG
CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHEEEECCCCCCCCCCCCC
SGAWIGAGNPRWSFYAGSSSKYDGWQNVENQNATGYGVGAYEGRHGTCMPSGPVPLTEDK
CCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCH
TVLKDHVNALVAEGGTAGHLGIAWGWYLVSPEWAAIWPEASEPLPYRQPQTSKAVILMTD
HHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEEC
GDFNIEHPTASRDSFRQSMDLCDGMKASSRRIQIYTVGFQVPSSVQRTGDGRTILEYCAT
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHCCCCHHHHHHHCC
SPSHAFSADSGEELIEVYRSIARSISDLRLKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA