Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798549

Identifier: 114798549

GI number: 114798549

Start: 452796

End: 454178

Strand: Reverse

Name: 114798549

Synonym: HNE_0458

Alternate gene names: NA

Gene position: 454178-452796 (Counterclockwise)

Preceding gene: 114799992

Following gene: 114799275

Centisome position: 12.26

GC content: 54.45

Gene sequence:

>1383_bases
ATGAAAACGGGCCACAGGAATTTTTTCCGGAACGAGTCGGGCAATGTCGCGATGATTGCGGCGCTGACCATCATTCCGAT
TGTCGGCATTGCCGGCTTTGCCATCGATTTCCAGGTGACGACGACGCAAAAGGCGCGGGTCCAGCAGGCCGTCGACAGCG
CCGTTCTGGCTGCCACAAAATCGATGCAGGACGGCAAGGACCGAGCCTACTCGCTGAAGGAAGCCAACGACTACTTCAAG
GGCATCCTCAACCAGTCGAACAATAGCGGGCTCAACTGCACCAACATCGATCTTGTCTACATTGATGAGACCGAAGAACT
TGAAGGGCACGTGGAATGCTCGCAGAATACCACGCTGTCAAAGGTTGCCGGGATCAGGCATCTCGATTTCAATGTTTCCT
CCGCCGCGACCTACGGCATCGGCAAGCTGGAAATTGCGTTCGTGTTCGACGTGTCGGGCTCGATGGCTAACGACAACCGG
ATGGGGAACCTGAAAGTGGCCGCCCGCGAAGCCGTCAATACCCTGCTGCCGGTTGAAGGATATGCCGGAGACCCGGAAGA
CGTGCGCCTGGCAATGGTATCGTACGACACGATGGTCAATGCGGGTCCGTATTTCAAAGCCGTGACGAATCAAGACCCAG
AGCGAACCGAGCCCTTTTACGGCTATATCCGTGAAAGAACGACTTGCCGCAGATACCGAAATAATGGGACGTGTCGCGAG
TGGAACTATGAATGGCGCGGGCCCTATCATCGCAGCTACACTATTAAATCTACTTGTGTTTGGGAACGCGAAGGCGCCGA
GCGGTACACAGATGCCAGCCCTGGTCACAATCGCTGGCTGCCACCCGTATCTGCGACATTTGATTCGTACAATGACAGTT
GGTCAACCGACCACCAAACCGACCCATGGTGCAACGACAATACGCCTATTCCGCTTACATACAACCGGAACAAGCTGCAC
GACTTCATCGATGATATGACACCGCGCAGAAATACAGCCGGTCACATTGGTCAAGCGTGGGGCTGGTATCTGGTCTCACC
GGAATGGAATAGCGTCTGGCCGGCTGGCTCTAAGGCTTTGCCTTATGACGAACCTGATGCCACCAAGGTCGTCATCATGA
TGTCTGACGGTCAGTATAATGAGACCCGCCATAACAATGCGTATCCAAGTTCTGTCACGCAGGCTGAGGCAATCTGTGAC
AAAATGAAGGAGAAGGAAGTCGTCATTTATACCGTCGGATTCGATGCCGGATACGGACAGGACGTTCTCAATTATTGCGC
CTCCAACCCCGCCTTTGCTTATAAGCCGACCAATGGTCAGGAGCTGACCGAAGCCTACAAGTCCATCGCCCGCTCCATCT
CCGATCTGCGGATTTCGCGCTGA

Upstream 100 bases:

>100_bases
CGGGGCAGAAACCCACATCTGTCATAACTCGCCACTGGCTGGGTATGTGGGGGCAGTTTTGACTCTCCCGCCCCGGCAAT
ATGGATGGGGTTGAGGTCAG

Downstream 100 bases:

>100_bases
CCGGATTTTGCAAAGCCCTTCTGCCTAGAGAGCAGTGAGACAATGATGCGCCTTTGCCGCCCAGTTACCCGTCTTCCCGC
GCTGCGAAGCGCCGAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATKSMQDGKDRAYSLKEANDYFK
GILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLSKVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNR
MGNLKVAAREAVNTLLPVEGYAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE
WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQTDPWCNDNTPIPLTYNRNKLH
DFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKALPYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICD
KMKEKEVVIYTVGFDAGYGQDVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR

Sequences:

>Translated_460_residues
MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATKSMQDGKDRAYSLKEANDYFK
GILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLSKVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNR
MGNLKVAAREAVNTLLPVEGYAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE
WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQTDPWCNDNTPIPLTYNRNKLH
DFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKALPYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICD
KMKEKEVVIYTVGFDAGYGQDVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR
>Mature_460_residues
MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATKSMQDGKDRAYSLKEANDYFK
GILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLSKVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNR
MGNLKVAAREAVNTLLPVEGYAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE
WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQTDPWCNDNTPIPLTYNRNKLH
DFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKALPYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICD
KMKEKEVVIYTVGFDAGYGQDVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51656; Mature: 51656

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATK
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
SMQDGKDRAYSLKEANDYFKGILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLS
HCCCCHHHHEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHCCCCEEEECCCCCHH
KVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNRMGNLKVAAREAVNTLLPVEG
HHHCEEEECCCCCCHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCC
YAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE
CCCCCHHEEEEEEEECHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQT
CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
DPWCNDNTPIPLTYNRNKLHDFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKAL
CCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
PYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICDKMKEKEVVIYTVGFDAGYGQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCH
DVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATK
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
SMQDGKDRAYSLKEANDYFKGILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLS
HCCCCHHHHEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHCCCCEEEECCCCCHH
KVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNRMGNLKVAAREAVNTLLPVEG
HHHCEEEECCCCCCHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCC
YAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE
CCCCCHHEEEEEEEECHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQT
CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
DPWCNDNTPIPLTYNRNKLHDFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKAL
CCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
PYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICDKMKEKEVVIYTVGFDAGYGQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCH
DVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA