| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798549
Identifier: 114798549
GI number: 114798549
Start: 452796
End: 454178
Strand: Reverse
Name: 114798549
Synonym: HNE_0458
Alternate gene names: NA
Gene position: 454178-452796 (Counterclockwise)
Preceding gene: 114799992
Following gene: 114799275
Centisome position: 12.26
GC content: 54.45
Gene sequence:
>1383_bases ATGAAAACGGGCCACAGGAATTTTTTCCGGAACGAGTCGGGCAATGTCGCGATGATTGCGGCGCTGACCATCATTCCGAT TGTCGGCATTGCCGGCTTTGCCATCGATTTCCAGGTGACGACGACGCAAAAGGCGCGGGTCCAGCAGGCCGTCGACAGCG CCGTTCTGGCTGCCACAAAATCGATGCAGGACGGCAAGGACCGAGCCTACTCGCTGAAGGAAGCCAACGACTACTTCAAG GGCATCCTCAACCAGTCGAACAATAGCGGGCTCAACTGCACCAACATCGATCTTGTCTACATTGATGAGACCGAAGAACT TGAAGGGCACGTGGAATGCTCGCAGAATACCACGCTGTCAAAGGTTGCCGGGATCAGGCATCTCGATTTCAATGTTTCCT CCGCCGCGACCTACGGCATCGGCAAGCTGGAAATTGCGTTCGTGTTCGACGTGTCGGGCTCGATGGCTAACGACAACCGG ATGGGGAACCTGAAAGTGGCCGCCCGCGAAGCCGTCAATACCCTGCTGCCGGTTGAAGGATATGCCGGAGACCCGGAAGA CGTGCGCCTGGCAATGGTATCGTACGACACGATGGTCAATGCGGGTCCGTATTTCAAAGCCGTGACGAATCAAGACCCAG AGCGAACCGAGCCCTTTTACGGCTATATCCGTGAAAGAACGACTTGCCGCAGATACCGAAATAATGGGACGTGTCGCGAG TGGAACTATGAATGGCGCGGGCCCTATCATCGCAGCTACACTATTAAATCTACTTGTGTTTGGGAACGCGAAGGCGCCGA GCGGTACACAGATGCCAGCCCTGGTCACAATCGCTGGCTGCCACCCGTATCTGCGACATTTGATTCGTACAATGACAGTT GGTCAACCGACCACCAAACCGACCCATGGTGCAACGACAATACGCCTATTCCGCTTACATACAACCGGAACAAGCTGCAC GACTTCATCGATGATATGACACCGCGCAGAAATACAGCCGGTCACATTGGTCAAGCGTGGGGCTGGTATCTGGTCTCACC GGAATGGAATAGCGTCTGGCCGGCTGGCTCTAAGGCTTTGCCTTATGACGAACCTGATGCCACCAAGGTCGTCATCATGA TGTCTGACGGTCAGTATAATGAGACCCGCCATAACAATGCGTATCCAAGTTCTGTCACGCAGGCTGAGGCAATCTGTGAC AAAATGAAGGAGAAGGAAGTCGTCATTTATACCGTCGGATTCGATGCCGGATACGGACAGGACGTTCTCAATTATTGCGC CTCCAACCCCGCCTTTGCTTATAAGCCGACCAATGGTCAGGAGCTGACCGAAGCCTACAAGTCCATCGCCCGCTCCATCT CCGATCTGCGGATTTCGCGCTGA
Upstream 100 bases:
>100_bases CGGGGCAGAAACCCACATCTGTCATAACTCGCCACTGGCTGGGTATGTGGGGGCAGTTTTGACTCTCCCGCCCCGGCAAT ATGGATGGGGTTGAGGTCAG
Downstream 100 bases:
>100_bases CCGGATTTTGCAAAGCCCTTCTGCCTAGAGAGCAGTGAGACAATGATGCGCCTTTGCCGCCCAGTTACCCGTCTTCCCGC GCTGCGAAGCGCCGAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATKSMQDGKDRAYSLKEANDYFK GILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLSKVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNR MGNLKVAAREAVNTLLPVEGYAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQTDPWCNDNTPIPLTYNRNKLH DFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKALPYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICD KMKEKEVVIYTVGFDAGYGQDVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR
Sequences:
>Translated_460_residues MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATKSMQDGKDRAYSLKEANDYFK GILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLSKVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNR MGNLKVAAREAVNTLLPVEGYAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQTDPWCNDNTPIPLTYNRNKLH DFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKALPYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICD KMKEKEVVIYTVGFDAGYGQDVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR >Mature_460_residues MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATKSMQDGKDRAYSLKEANDYFK GILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLSKVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNR MGNLKVAAREAVNTLLPVEGYAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQTDPWCNDNTPIPLTYNRNKLH DFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKALPYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICD KMKEKEVVIYTVGFDAGYGQDVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51656; Mature: 51656
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATK CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHH SMQDGKDRAYSLKEANDYFKGILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLS HCCCCHHHHEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHCCCCEEEECCCCCHH KVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNRMGNLKVAAREAVNTLLPVEG HHHCEEEECCCCCCHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCC YAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE CCCCCHHEEEEEEEECHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQT CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC DPWCNDNTPIPLTYNRNKLHDFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKAL CCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC PYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICDKMKEKEVVIYTVGFDAGYGQ CCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCH DVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTGHRNFFRNESGNVAMIAALTIIPIVGIAGFAIDFQVTTTQKARVQQAVDSAVLAATK CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHH SMQDGKDRAYSLKEANDYFKGILNQSNNSGLNCTNIDLVYIDETEELEGHVECSQNTTLS HCCCCHHHHEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHCCCCEEEECCCCCHH KVAGIRHLDFNVSSAATYGIGKLEIAFVFDVSGSMANDNRMGNLKVAAREAVNTLLPVEG HHHCEEEECCCCCCHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCC YAGDPEDVRLAMVSYDTMVNAGPYFKAVTNQDPERTEPFYGYIRERTTCRRYRNNGTCRE CCCCCHHEEEEEEEECHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE WNYEWRGPYHRSYTIKSTCVWEREGAERYTDASPGHNRWLPPVSATFDSYNDSWSTDHQT CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC DPWCNDNTPIPLTYNRNKLHDFIDDMTPRRNTAGHIGQAWGWYLVSPEWNSVWPAGSKAL CCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC PYDEPDATKVVIMMSDGQYNETRHNNAYPSSVTQAEAICDKMKEKEVVIYTVGFDAGYGQ CCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCH DVLNYCASNPAFAYKPTNGQELTEAYKSIARSISDLRISR HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA