| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is entA [C]
Identifier: 114799268
GI number: 114799268
Start: 438602
End: 439570
Strand: Reverse
Name: entA [C]
Synonym: HNE_0442
Alternate gene names: 114799268
Gene position: 439570-438602 (Counterclockwise)
Preceding gene: 114798291
Following gene: 114798677
Centisome position: 11.86
GC content: 63.36
Gene sequence:
>969_bases ATGGCGGCTAATGATCAGGTACCTGTCGGCTCAGGCTTTCACGCAAAGAGCACCGCGAGGGAGGTTGTTGAGGGGATCAG CCTCTCGGGCAAGCACGCGATTGTGACCGGCGGATATTCGGGCATCGGCCTTGAGACAGTCCGCGCGCTGGCGGGCGCCG GCGCGAAGGTGACGGTGCCAGCCCGCCGGCCGGACGCGGCAAAAGACGCGCTCACCGGGATCAATGGCGTTACGGTTGCC GCGATGGACCTGGCCGATCTCGGCAGTGTGCGCCGCTTTGCGCAGGATTATTCTGCGGCGGCGCCGAAGCTGGACCTGCT CATAAACAATGCCGGGATCATGGCGTGTCCGCTCGCCCACGTTGGCGATGGCTGGGAAGCCCAGTTCGGCACCAACCATC TGGGTCACCTTGCCCTGTATCAGGGTCTCCTGCCCGCGTTGCGCGCCGCAAATGGCGCCCGCGTGGTAGCGCTCTCTTCC ACCGGACATGTCCGCTCCGATGTGATCTGGGACGATCCCAACTATACGTCCCGCGCCTATGACAAATGGGAAGCCTACGG ACAGTCCAAATCCGCCAATGCGCTGTTCGCGCTGGGGGTGGACATGCGGGAAAAAGCCAATGGCATTCGCGCCTTCTCCG TGCATCCCGGCGGCATCTTTACGAACCTTCAGCGCCATCTGCCCGACGAGGAAATGGTGGCGCTCGGCTGGAAAAGTCCT GACGGCACGATCCCGGAGATGATCCAGGCGATGTTCAAGACGCCGGAACAGGGCGCCTCCACCACCGTGTGGGCCGCAAC GGCGCCAAAGCTGAACGGGAAAGGCGGCGTTTATTGTGAAGACTGTGACATCGCCCGCGCCGCGACGCCCGACAGCAAAC GCTGGGAACATGCCCGCGCCTGGATCAGCGATGATGCCCGCGCCGAGAAACTGTGGGCGATGAGCGACACATTCCTGGCG AATGCATGA
Upstream 100 bases:
>100_bases GGCAAGGCTGGGGCAAAGCCGGTATTAGATTGCAGTATCCCCCAGATAGAGAGGGGGCTAGCATTGGGACAATACGTAGA AACACATGGGAGAAATGACG
Downstream 100 bases:
>100_bases GAGTCTGACGGGTTCAGATTGACGCACCCCGGCTTTCAGCGCACGAGAGCGCCATGAGCGAAACGCAACTCCCGACCACC GCCCGGCAGGCTCCGCGGCG
Product: short chain dehydrogenase/reductase family oxidoreductase
Products: 2,3-Dihydroxybenzoate; H+; Nicotinamide adenine dinucleotide - reduced [C]
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MAANDQVPVGSGFHAKSTAREVVEGISLSGKHAIVTGGYSGIGLETVRALAGAGAKVTVPARRPDAAKDALTGINGVTVA AMDLADLGSVRRFAQDYSAAAPKLDLLINNAGIMACPLAHVGDGWEAQFGTNHLGHLALYQGLLPALRAANGARVVALSS TGHVRSDVIWDDPNYTSRAYDKWEAYGQSKSANALFALGVDMREKANGIRAFSVHPGGIFTNLQRHLPDEEMVALGWKSP DGTIPEMIQAMFKTPEQGASTTVWAATAPKLNGKGGVYCEDCDIARAATPDSKRWEHARAWISDDARAEKLWAMSDTFLA NA
Sequences:
>Translated_322_residues MAANDQVPVGSGFHAKSTAREVVEGISLSGKHAIVTGGYSGIGLETVRALAGAGAKVTVPARRPDAAKDALTGINGVTVA AMDLADLGSVRRFAQDYSAAAPKLDLLINNAGIMACPLAHVGDGWEAQFGTNHLGHLALYQGLLPALRAANGARVVALSS TGHVRSDVIWDDPNYTSRAYDKWEAYGQSKSANALFALGVDMREKANGIRAFSVHPGGIFTNLQRHLPDEEMVALGWKSP DGTIPEMIQAMFKTPEQGASTTVWAATAPKLNGKGGVYCEDCDIARAATPDSKRWEHARAWISDDARAEKLWAMSDTFLA NA >Mature_321_residues AANDQVPVGSGFHAKSTAREVVEGISLSGKHAIVTGGYSGIGLETVRALAGAGAKVTVPARRPDAAKDALTGINGVTVAA MDLADLGSVRRFAQDYSAAAPKLDLLINNAGIMACPLAHVGDGWEAQFGTNHLGHLALYQGLLPALRAANGARVVALSST GHVRSDVIWDDPNYTSRAYDKWEAYGQSKSANALFALGVDMREKANGIRAFSVHPGGIFTNLQRHLPDEEMVALGWKSPD GTIPEMIQAMFKTPEQGASTTVWAATAPKLNGKGGVYCEDCDIARAATPDSKRWEHARAWISDDARAEKLWAMSDTFLAN A
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI10190746, Length=319, Percent_Identity=32.2884012539185, Blast_Score=156, Evalue=2e-38, Organism=Homo sapiens, GI186928839, Length=304, Percent_Identity=34.2105263157895, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI166795268, Length=306, Percent_Identity=33.9869281045752, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI225579078, Length=295, Percent_Identity=34.2372881355932, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI7706523, Length=321, Percent_Identity=31.4641744548287, Blast_Score=138, Evalue=7e-33, Organism=Homo sapiens, GI193804850, Length=261, Percent_Identity=35.632183908046, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI19923931, Length=231, Percent_Identity=35.0649350649351, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI146231950, Length=302, Percent_Identity=32.4503311258278, Blast_Score=114, Evalue=8e-26, Organism=Escherichia coli, GI1786812, Length=210, Percent_Identity=30.952380952381, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193207620, Length=317, Percent_Identity=32.1766561514196, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17532805, Length=317, Percent_Identity=32.1766561514196, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71992402, Length=286, Percent_Identity=34.2657342657343, Blast_Score=130, Evalue=7e-31, Organism=Caenorhabditis elegans, GI17532791, Length=333, Percent_Identity=30.6306306306306, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17558006, Length=279, Percent_Identity=31.5412186379928, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17535059, Length=289, Percent_Identity=30.7958477508651, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI32565532, Length=232, Percent_Identity=32.3275862068966, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17505416, Length=274, Percent_Identity=27.007299270073, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI72001364, Length=309, Percent_Identity=28.1553398058252, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324820, Length=282, Percent_Identity=29.0780141843972, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322227, Length=240, Percent_Identity=24.1666666666667, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI22024069, Length=296, Percent_Identity=34.7972972972973, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI45554248, Length=296, Percent_Identity=35.8108108108108, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI24640117, Length=296, Percent_Identity=35.8108108108108, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI28573296, Length=294, Percent_Identity=36.3945578231293, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI19921754, Length=299, Percent_Identity=33.7792642140468, Blast_Score=144, Evalue=7e-35, Organism=Drosophila melanogaster, GI24586328, Length=294, Percent_Identity=33.3333333333333, Blast_Score=143, Evalue=1e-34, Organism=Drosophila melanogaster, GI161076371, Length=294, Percent_Identity=35.0340136054422, Blast_Score=141, Evalue=5e-34, Organism=Drosophila melanogaster, GI20129347, Length=322, Percent_Identity=28.8819875776398, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24656154, Length=286, Percent_Identity=34.2657342657343, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI19922628, Length=286, Percent_Identity=34.2657342657343, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI24647946, Length=305, Percent_Identity=31.8032786885246, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI45553409, Length=290, Percent_Identity=32.4137931034483, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24647948, Length=290, Percent_Identity=32.4137931034483, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24647931, Length=280, Percent_Identity=29.6428571428571, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI23397609, Length=220, Percent_Identity=31.3636363636364, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.3.1.28 [C]
Molecular weight: Translated: 34068; Mature: 33936
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANDQVPVGSGFHAKSTAREVVEGISLSGKHAIVTGGYSGIGLETVRALAGAGAKVTVP CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEC ARRPDAAKDALTGINGVTVAAMDLADLGSVRRFAQDYSAAAPKLDLLINNAGIMACPLAH CCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECHHH VGDGWEAQFGTNHLGHLALYQGLLPALRAANGARVVALSSTGHVRSDVIWDDPNYTSRAY CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHHH DKWEAYGQSKSANALFALGVDMREKANGIRAFSVHPGGIFTNLQRHLPDEEMVALGWKSP HHHHHHCCCCCCCEEEEECCCHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCCC DGTIPEMIQAMFKTPEQGASTTVWAATAPKLNGKGGVYCEDCDIARAATPDSKRWEHARA CCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHH WISDDARAEKLWAMSDTFLANA HHCCCHHHHHHHHCCCHHHCCC >Mature Secondary Structure AANDQVPVGSGFHAKSTAREVVEGISLSGKHAIVTGGYSGIGLETVRALAGAGAKVTVP CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEC ARRPDAAKDALTGINGVTVAAMDLADLGSVRRFAQDYSAAAPKLDLLINNAGIMACPLAH CCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECHHH VGDGWEAQFGTNHLGHLALYQGLLPALRAANGARVVALSSTGHVRSDVIWDDPNYTSRAY CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHHH DKWEAYGQSKSANALFALGVDMREKANGIRAFSVHPGGIFTNLQRHLPDEEMVALGWKSP HHHHHHCCCCCCCEEEEECCCHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCCC DGTIPEMIQAMFKTPEQGASTTVWAATAPKLNGKGGVYCEDCDIARAATPDSKRWEHARA CCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHH WISDDARAEKLWAMSDTFLANA HHCCCHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): 5550 [C]
Specific activity: 66
Km value (mM): 0.26 {methyl-2,3-dehydro-3-hydroxybenzoate}} 0.2 {3-oxocyclohexane-1-carboxylic} 0.3 {2,3-dihydro-2,3-dihydroxybenzoate}} [C]
Substrates: 2,3-Dihydro-2,3-dihydroxybenzoate; Nicotinamide adenine dinucleotide [C]
Specific reaction: 2,3-Dihydro-2,3-dihydroxybenzoate + Nicotinamide adenine dinucleotide <==> 2,3-Dihydroxybenzoate + H+ + Nicotinamide adenine dinucleotide - reduced [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8383668 [H]