Click here to switch to the map view.

The map label for this gene is 114798291

Identifier: 114798291

GI number: 114798291

Start: 440319

End: 440783

Strand: Reverse

Name: 114798291

Synonym: HNE_0444

Alternate gene names: NA

Gene position: 440783-440319 (Counterclockwise)

Preceding gene: 114797502

Following gene: 114799268

Centisome position: 11.9

GC content: 64.73

Gene sequence:

>465_bases
ATGGCAGCAGATAAGGCAAGGGAACCGGCACAAGCGGCGCCCCCATCCGCTAAGGCCCCTTCCAGCCAAGCGAATGTTAT
CGCGGCCGGCTGCCGTGTCATCGGTAATCTGACGATTTCCGGATCGCTCCGTCTCGGCGGAGAGGTTGTGGGAGACGTGC
ATTGCGACGGCGCGCTGATCGTGGAAACCGGCGCCTCCATCAAAGGCCGGACGCGCGCGGGCGACATACTGGTCATGGGC
TCGCTGATTGGCGAGATTGTCGCGGTGCGCAAGATTGATGTGATGACGGGCGCGCGCGTTGAGGGCTCCATCTTCGCGCC
GTCCATGAAGGTTGAGGGCAATGCCTGCGTGGACGGTGATCTGCTGATCTCACCCGAGCGTTCGCCCGCCCATGCCGAGC
GGGCGAAAACCCTGTCCATTCTGGCGCCGGCCCGGAGTGAGCCGCCGGCCAGCACAGCCGTCTAG

Upstream 100 bases:

>100_bases
CCGGACTTTCATCGGCTATTGCCGGGCGGGGCTGTCCCGTTCTGGATCACCTTGGACATGATGGCACCTTTTCATCGGGT
GGATATTGGGAGACACGCGG

Downstream 100 bases:

>100_bases
TTGTTCTGCAGGTTGCGCAGACGCTGCATGGAATTGTCATCGGGATCGAACGCGCCAAGCGTTTGAACACGCTCGCAGGC
CCATTCATAATCCTTTGAAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MAADKAREPAQAAPPSAKAPSSQANVIAAGCRVIGNLTISGSLRLGGEVVGDVHCDGALIVETGASIKGRTRAGDILVMG
SLIGEIVAVRKIDVMTGARVEGSIFAPSMKVEGNACVDGDLLISPERSPAHAERAKTLSILAPARSEPPASTAV

Sequences:

>Translated_154_residues
MAADKAREPAQAAPPSAKAPSSQANVIAAGCRVIGNLTISGSLRLGGEVVGDVHCDGALIVETGASIKGRTRAGDILVMG
SLIGEIVAVRKIDVMTGARVEGSIFAPSMKVEGNACVDGDLLISPERSPAHAERAKTLSILAPARSEPPASTAV
>Mature_153_residues
AADKAREPAQAAPPSAKAPSSQANVIAAGCRVIGNLTISGSLRLGGEVVGDVHCDGALIVETGASIKGRTRAGDILVMGS
LIGEIVAVRKIDVMTGARVEGSIFAPSMKVEGNACVDGDLLISPERSPAHAERAKTLSILAPARSEPPASTAV

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15535; Mature: 15404

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADKAREPAQAAPPSAKAPSSQANVIAAGCRVIGNLTISGSLRLGGEVVGDVHCDGALI
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEEEEECCEEECCEEEEEEECCCEEE
VETGASIKGRTRAGDILVMGSLIGEIVAVRKIDVMTGARVEGSIFAPSMKVEGNACVDGD
EECCCCCCCCCCCCCEEEEHHHHHHHHHHHEEEEECCCCCCCEEECCCEEECCCEEECCC
LLISPERSPAHAERAKTLSILAPARSEPPASTAV
EEECCCCCCCHHHHHCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AADKAREPAQAAPPSAKAPSSQANVIAAGCRVIGNLTISGSLRLGGEVVGDVHCDGALI
CCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEEEEEEECCEEECCEEEEEEECCCEEE
VETGASIKGRTRAGDILVMGSLIGEIVAVRKIDVMTGARVEGSIFAPSMKVEGNACVDGD
EECCCCCCCCCCCCCEEEEHHHHHHHHHHHEEEEECCCCCCCEEECCCEEECCCEEECCC
LLISPERSPAHAERAKTLSILAPARSEPPASTAV
EEECCCCCCCHHHHHCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA