Click here to switch to the map view.

The map label for this gene is ydjZ [C]

Identifier: 114798677

GI number: 114798677

Start: 437799

End: 438548

Strand: Reverse

Name: ydjZ [C]

Synonym: HNE_0441

Alternate gene names: 114798677

Gene position: 438548-437799 (Counterclockwise)

Preceding gene: 114799268

Following gene: 114797728

Centisome position: 11.84

GC content: 64.53

Gene sequence:

>750_bases
ATGAGCGAAACGCAACTCCCGACCACCGCCCGGCAGGCTCCGCGGCGCGCGATTCTTCTGGGTATCGCGCTGATCCTCAT
CATTGCCGGCGTGTTCGCCGCTGGCCGGATGGGGTTGCTGCCGAACGCCGATACGGTGACGGGCTGGATGGAAACACTCG
CCGAAAGCCCCTGGGGGCTGGTTGCCGTTGTCGCGGTCTATTGCGTCGCGGCCTTCATGGGCATTCCGCAATTTGCGCTG
ATCGCGGCGACGATTGCCGTGTTCGGGCCGTGGTATGGCGCAGGCTATTCCTGGGTCGCCAACATGGTTTCCGGAGCGTT
GACCTTCTGGATTGGCCGGGCGGCTGGCGAGGAAGCCTTCCGGCGCTATGCCGGAAAAAGCGCGCAGAAGCTCTCCCGCT
TTGTCGGACGCAACGCGCTCGTCACCAGCGCGATCGTTCGCAACGTGCCGACCGGGCCGTTCCTGCTGGTGAATATGGCG
TTCGGCGTCAGCAATGCGACGTTCCGCGATTTCTGGCTGGGGCTGGCGCTGGGCATCATCCCCAAGATCGCCCTGATCGC
CTTTGCCGGTCGCAGCCTTCTGGCCGCGCTGCAGGGCAATCTGGTCATCGCGATCATTGCCGCCGTGGCCGCGGTGACCG
TCTACGCCGCCGGATATATCTATTTCAGGCGCCGGGTAGCCCGGACGGGGCAAAATCTTGCTGCCAGCTCAGGCTCCCCG
GTTGACAGCACCGCGCAAGCCGTTGATTAG

Upstream 100 bases:

>100_bases
CCGAGAAACTGTGGGCGATGAGCGACACATTCCTGGCGAATGCATGAGAGTCTGACGGGTTCAGATTGACGCACCCCGGC
TTTCAGCGCACGAGAGCGCC

Downstream 100 bases:

>100_bases
AGTGGGCATGCGCAAAGTTCTGCCCCTACTCCTCCTGCTTACCGGCCCCTGGCCGGGGACGGACACCCAAGTCTGAGGGT
GGACGCGCGACCAGGGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein; Phospholipase D; SNARE Associated Golgi Protein-Related Protein; SNARE Associated Golgi Protein-Associated Protein; Phospholipase D Domain Protein; Transmembrane Phospholipase Protein; Snare Associated Golgi Protein-Like Protein; SNARE Associated Golgi Protein-Like Protein

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSETQLPTTARQAPRRAILLGIALILIIAGVFAAGRMGLLPNADTVTGWMETLAESPWGLVAVVAVYCVAAFMGIPQFAL
IAATIAVFGPWYGAGYSWVANMVSGALTFWIGRAAGEEAFRRYAGKSAQKLSRFVGRNALVTSAIVRNVPTGPFLLVNMA
FGVSNATFRDFWLGLALGIIPKIALIAFAGRSLLAALQGNLVIAIIAAVAAVTVYAAGYIYFRRRVARTGQNLAASSGSP
VDSTAQAVD

Sequences:

>Translated_249_residues
MSETQLPTTARQAPRRAILLGIALILIIAGVFAAGRMGLLPNADTVTGWMETLAESPWGLVAVVAVYCVAAFMGIPQFAL
IAATIAVFGPWYGAGYSWVANMVSGALTFWIGRAAGEEAFRRYAGKSAQKLSRFVGRNALVTSAIVRNVPTGPFLLVNMA
FGVSNATFRDFWLGLALGIIPKIALIAFAGRSLLAALQGNLVIAIIAAVAAVTVYAAGYIYFRRRVARTGQNLAASSGSP
VDSTAQAVD
>Mature_248_residues
SETQLPTTARQAPRRAILLGIALILIIAGVFAAGRMGLLPNADTVTGWMETLAESPWGLVAVVAVYCVAAFMGIPQFALI
AATIAVFGPWYGAGYSWVANMVSGALTFWIGRAAGEEAFRRYAGKSAQKLSRFVGRNALVTSAIVRNVPTGPFLLVNMAF
GVSNATFRDFWLGLALGIIPKIALIAFAGRSLLAALQGNLVIAIIAAVAAVTVYAAGYIYFRRRVARTGQNLAASSGSPV
DSTAQAVD

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788049, Length=152, Percent_Identity=26.9736842105263, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26142; Mature: 26011

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHCC
>Mature Secondary Structure 
SETQLPTTARQAPRRAILLGIALILIIAGVFAAGRMGLLPNADTVTGWMETLAESPWGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
VAVVAVYCVAAFMGIPQFALIAATIAVFGPWYGAGYSWVANMVSGALTFWIGRAAGEEAF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRYAGKSAQKLSRFVGRNALVTSAIVRNVPTGPFLLVNMAFGVSNATFRDFWLGLALGII
HHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHH
PKIALIAFAGRSLLAALQGNLVIAIIAAVAAVTVYAAGYIYFRRRVARTGQNLAASSGSP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
VDSTAQAVD
CCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA