Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799108

Identifier: 114799108

GI number: 114799108

Start: 1172752

End: 1173300

Strand: Direct

Name: 114799108

Synonym: HNE_1160

Alternate gene names: NA

Gene position: 1172752-1173300 (Clockwise)

Preceding gene: 114797162

Following gene: 114797527

Centisome position: 31.65

GC content: 66.3

Gene sequence:

>549_bases
TTGATCGCTTTTTCAGGCAGCTGGTTCCGGCGGCGCTCCGCGCTCAAAAAGGTTGTGGCGGAGGCATATGGCCGTCTGGC
GCGCGAAGCGCTGATGCCGGTGCACTATGAGGCGCACGGTGTTCCGGACACTTTTGAGGGCCGCGCGCAGATGGTTACGG
CCATGACGGCCCTTGCCTGCAAGCGATTTGCCGATGTGGGCGGGCCGCTGGCGGGCGAACTGACCGAGCGGCTGAACGCG
CGCGTCTTCGACGGATTTGATGCGGCATTCCGCGAAAAAGGCGTTGGGGATCATTCCATCGCGCGCAAGGTGCGCACGCT
GGCCGAGGGGCATTCCGGGCTGGGGCGGGCGTTGATGGAGGCGCTGAGCGCGGGTGATTCGGACGGGGCGCTGGAAGATG
TGCTGCGCCGCAACGGGGTGACACCGCCGGAAAAAGCAGGCGATCTGGCCAAGGCGCTGCGCCGCTACCGGGCCGTGTTT
GAGGCGCAGACGGACGCGGAAATACTGAGCGGCGGGTTCGCCTGTGGCGCGAGCGAGCCGGGTAAATGA

Upstream 100 bases:

>100_bases
TGCGGCCACAAGAGAAAGACGCGCCATGTATGGCTCCTATAGGCTTTGACCGCAGACCTAGCGACAGGTAACCGGGCTTG
GCAAGCATTGGAGTACAGGG

Downstream 100 bases:

>100_bases
TCGGCACGGGGTTGTGATGGACCGCATCTCGCCCGTTGCTTTGAGGGGCGGCGCCACTTAAACCCGCAAAAATACGCACA
ACGCCGTAACTACGGTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALACKRFADVGGPLAGELTERLNA
RVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALMEALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVF
EAQTDAEILSGGFACGASEPGK

Sequences:

>Translated_182_residues
MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALACKRFADVGGPLAGELTERLNA
RVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALMEALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVF
EAQTDAEILSGGFACGASEPGK
>Mature_182_residues
MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALACKRFADVGGPLAGELTERLNA
RVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALMEALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVF
EAQTDAEILSGGFACGASEPGK

Specific function: Unknown

COG id: COG5452

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19453; Mature: 19453

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALAC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHH
KRFADVGGPLAGELTERLNARVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALME
HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
ALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVFEAQTDAEILSGGFACGASEP
HHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GK
CC
>Mature Secondary Structure
MIAFSGSWFRRRSALKKVVAEAYGRLAREALMPVHYEAHGVPDTFEGRAQMVTAMTALAC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHH
KRFADVGGPLAGELTERLNARVFDGFDAAFREKGVGDHSIARKVRTLAEGHSGLGRALME
HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
ALSAGDSDGALEDVLRRNGVTPPEKAGDLAKALRRYRAVFEAQTDAEILSGGFACGASEP
HHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA