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The map label for this gene is mmgC [H]

Identifier: 114799055

GI number: 114799055

Start: 2168293

End: 2169486

Strand: Reverse

Name: mmgC [H]

Synonym: HNE_2094

Alternate gene names: 114799055

Gene position: 2169486-2168293 (Counterclockwise)

Preceding gene: 114800060

Following gene: 114798530

Centisome position: 58.56

GC content: 59.72

Gene sequence:

>1194_bases
ATGAACCTCGAATTTTCACCCGAAGAGATCGCCTTCCGTGATGAAGTGCGCACCTTTATCCGTGACAACTATCCCCAAGA
GCTCGTTGGGCTTGGTAACCGGGAAGATCTGACCCGCGAGCAGTTCCTCGCCTGGCATAAGATCCTCGGCAAAAAGGGCT
GGTCTGCCCCCGCTTGGCCGCAGAAGTACGGCGGCACGGGCTGGACCTCCACCCAGCGCTACATCTGGTCGGAAGAGAAC
GCTCGCGTTGACGCGCTGATGCCGCTTCCGTTCGGCATCTCGATGGTCGGCCCGGTTATCTACACATTCGGCAACGAAGA
ACAGAAAGCCAAACACCTGCCCGGCATCCTCGCCGGCGATGTCTGGTGGGCACAGGGCTATTCCGAGCCGGGCGCAGGGT
CTGACCTCGCCAGCCTGAAAACCACCGCCGTGCGTGATGGCGATCACTACATTCTCAACGGTCAGAAAACCTGGACGACG
CTCGCCCAGCACGCTGACTGGGGCTTCTTCCTCTGCCGCACCGACCCGTCGGCCAAAGCGCAGGAAGGCATCTCCTTCAT
CCTCGTCGACATGAAATCGCCCGGCATCGAAGTGCGTCCGATCAAGCTGATCGATGGCACGCATGAAGTGAACGAAACCT
GGCTGACAGACGTTCGCGTGCCGGTCGAAAACCTCGTCGGCAAGGAAAACGAAGGCTGGACCTATGCCAAGTTCCTGCTG
GCGCACGAGCGTTCGGGCATTGCTGGCGTGGCGCGCTCCAAGCGCGGCGTTGAGCGTTTGCGCACCATTGCGACCCAGGA
AACGATGGACGGCACGCCGCTGATCAAGACGGACGAATTCGCCCGCAAGATCAGCCAGCTGGAAATCGACCTGACCGCGC
TCGAATTCACAGAACTGCGCACGCTCGCTTCTGAAGCAGCCGGCAAGGGCCCTGGCCCGGAAAGCTCGATCCTCAAGATC
AAGGGCACCGAAATCCAGCAACGCCTGACGGAGCTGACGCTGGAAGCCGTGGGCAATTATGGCGCGCCCTATGCGCGCGG
CATGATGCATGACGGCAGCAATGAAGTGGGCGTCGGCCCAGACTATTCGAACTTCAGCGCGGACAGCTACTTCAACATGC
GCAAGACATCTATCTATGGCGGATCGAACGAGATCCAGCGCAACATTATCAGCAAGATGATCCTCGGCCTTTAA

Upstream 100 bases:

>100_bases
TTTACGTTTACGTGCGCGTCACCTTGTCAGCGAATAGGAATGGCTGACATACAGAAATGAAGTGCCGGGACCAAACAGGC
AGATCCAGGAGCGAACGTCC

Downstream 100 bases:

>100_bases
GGCAACGGGGCAGGGAGGAGATTACATCCATGGATTTCAATTTCACTGAAGAACAGACAATGATCCGCGACAGCCTCGCA
CGGCTGATCAAGGACCAGTA

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNLEFSPEEIAFRDEVRTFIRDNYPQELVGLGNREDLTREQFLAWHKILGKKGWSAPAWPQKYGGTGWTSTQRYIWSEEN
ARVDALMPLPFGISMVGPVIYTFGNEEQKAKHLPGILAGDVWWAQGYSEPGAGSDLASLKTTAVRDGDHYILNGQKTWTT
LAQHADWGFFLCRTDPSAKAQEGISFILVDMKSPGIEVRPIKLIDGTHEVNETWLTDVRVPVENLVGKENEGWTYAKFLL
AHERSGIAGVARSKRGVERLRTIATQETMDGTPLIKTDEFARKISQLEIDLTALEFTELRTLASEAAGKGPGPESSILKI
KGTEIQQRLTELTLEAVGNYGAPYARGMMHDGSNEVGVGPDYSNFSADSYFNMRKTSIYGGSNEIQRNIISKMILGL

Sequences:

>Translated_397_residues
MNLEFSPEEIAFRDEVRTFIRDNYPQELVGLGNREDLTREQFLAWHKILGKKGWSAPAWPQKYGGTGWTSTQRYIWSEEN
ARVDALMPLPFGISMVGPVIYTFGNEEQKAKHLPGILAGDVWWAQGYSEPGAGSDLASLKTTAVRDGDHYILNGQKTWTT
LAQHADWGFFLCRTDPSAKAQEGISFILVDMKSPGIEVRPIKLIDGTHEVNETWLTDVRVPVENLVGKENEGWTYAKFLL
AHERSGIAGVARSKRGVERLRTIATQETMDGTPLIKTDEFARKISQLEIDLTALEFTELRTLASEAAGKGPGPESSILKI
KGTEIQQRLTELTLEAVGNYGAPYARGMMHDGSNEVGVGPDYSNFSADSYFNMRKTSIYGGSNEIQRNIISKMILGL
>Mature_397_residues
MNLEFSPEEIAFRDEVRTFIRDNYPQELVGLGNREDLTREQFLAWHKILGKKGWSAPAWPQKYGGTGWTSTQRYIWSEEN
ARVDALMPLPFGISMVGPVIYTFGNEEQKAKHLPGILAGDVWWAQGYSEPGAGSDLASLKTTAVRDGDHYILNGQKTWTT
LAQHADWGFFLCRTDPSAKAQEGISFILVDMKSPGIEVRPIKLIDGTHEVNETWLTDVRVPVENLVGKENEGWTYAKFLL
AHERSGIAGVARSKRGVERLRTIATQETMDGTPLIKTDEFARKISQLEIDLTALEFTELRTLASEAAGKGPGPESSILKI
KGTEIQQRLTELTLEAVGNYGAPYARGMMHDGSNEVGVGPDYSNFSADSYFNMRKTSIYGGSNEIQRNIISKMILGL

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=407, Percent_Identity=28.992628992629, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI4501857, Length=397, Percent_Identity=26.9521410579345, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI187960098, Length=348, Percent_Identity=25.2873563218391, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI4557231, Length=348, Percent_Identity=25.2873563218391, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI226958414, Length=218, Percent_Identity=33.4862385321101, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI226958412, Length=208, Percent_Identity=33.6538461538462, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4557233, Length=384, Percent_Identity=27.0833333333333, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI7656849, Length=341, Percent_Identity=29.0322580645161, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI4557235, Length=301, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI76496475, Length=301, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI4503943, Length=298, Percent_Identity=26.510067114094, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI7669494, Length=298, Percent_Identity=26.510067114094, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI211971008, Length=309, Percent_Identity=23.9482200647249, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI48976061, Length=309, Percent_Identity=23.9482200647249, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI21361497, Length=204, Percent_Identity=30.3921568627451, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI38505218, Length=297, Percent_Identity=25.2525252525253, Blast_Score=76, Evalue=5e-14,
Organism=Escherichia coli, GI87081958, Length=408, Percent_Identity=25, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1786223, Length=306, Percent_Identity=25.1633986928105, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17570075, Length=414, Percent_Identity=27.0531400966184, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17569725, Length=369, Percent_Identity=28.7262872628726, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=355, Percent_Identity=28.7323943661972, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=342, Percent_Identity=26.9005847953216, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=200, Percent_Identity=34.5, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17551932, Length=353, Percent_Identity=25.7790368271955, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=403, Percent_Identity=25.3101736972705, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=181, Percent_Identity=35.3591160220994, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71982178, Length=189, Percent_Identity=33.8624338624339, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17505929, Length=353, Percent_Identity=24.929178470255, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=192, Percent_Identity=32.2916666666667, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=202, Percent_Identity=31.6831683168317, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=202, Percent_Identity=31.6831683168317, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17533517, Length=363, Percent_Identity=22.3140495867769, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=302, Percent_Identity=23.5099337748344, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24666513, Length=348, Percent_Identity=28.735632183908, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21356377, Length=385, Percent_Identity=26.7532467532467, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281363737, Length=311, Percent_Identity=27.3311897106109, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24660351, Length=305, Percent_Identity=28.5245901639344, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24646207, Length=356, Percent_Identity=25.561797752809, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21355753, Length=228, Percent_Identity=30.7017543859649, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI19920834, Length=307, Percent_Identity=30.6188925081433, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44166; Mature: 44166

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEFSPEEIAFRDEVRTFIRDNYPQELVGLGNREDLTREQFLAWHKILGKKGWSAPAWP
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
QKYGGTGWTSTQRYIWSEENARVDALMPLPFGISMVGPVIYTFGNEEQKAKHLPGILAGD
HHCCCCCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHEEEECCCCHHHHHHCCCEEECC
VWWAQGYSEPGAGSDLASLKTTAVRDGDHYILNGQKTWTTLAQHADWGFFLCRTDPSAKA
CHHHCCCCCCCCCCCHHHHHHHEEECCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCHH
QEGISFILVDMKSPGIEVRPIKLIDGTHEVNETWLTDVRVPVENLVGKENEGWTYAKFLL
HCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHH
AHERSGIAGVARSKRGVERLRTIATQETMDGTPLIKTDEFARKISQLEIDLTALEFTELR
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHEEEEEHHHHHHHH
TLASEAAGKGPGPESSILKIKGTEIQQRLTELTLEAVGNYGAPYARGMMHDGSNEVGVGP
HHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCC
DYSNFSADSYFNMRKTSIYGGSNEIQRNIISKMILGL
CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLEFSPEEIAFRDEVRTFIRDNYPQELVGLGNREDLTREQFLAWHKILGKKGWSAPAWP
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
QKYGGTGWTSTQRYIWSEENARVDALMPLPFGISMVGPVIYTFGNEEQKAKHLPGILAGD
HHCCCCCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHEEEECCCCHHHHHHCCCEEECC
VWWAQGYSEPGAGSDLASLKTTAVRDGDHYILNGQKTWTTLAQHADWGFFLCRTDPSAKA
CHHHCCCCCCCCCCCHHHHHHHEEECCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCHH
QEGISFILVDMKSPGIEVRPIKLIDGTHEVNETWLTDVRVPVENLVGKENEGWTYAKFLL
HCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHH
AHERSGIAGVARSKRGVERLRTIATQETMDGTPLIKTDEFARKISQLEIDLTALEFTELR
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHEEEEEHHHHHHHH
TLASEAAGKGPGPESSILKIKGTEIQQRLTELTLEAVGNYGAPYARGMMHDGSNEVGVGP
HHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCC
DYSNFSADSYFNMRKTSIYGGSNEIQRNIISKMILGL
CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]