| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is cdsA [H]
Identifier: 114798911
GI number: 114798911
Start: 1816055
End: 1816873
Strand: Direct
Name: cdsA [H]
Synonym: HNE_1773
Alternate gene names: 114798911
Gene position: 1816055-1816873 (Clockwise)
Preceding gene: 114798355
Following gene: 114799124
Centisome position: 49.02
GC content: 56.04
Gene sequence:
>819_bases ATGGGTGACTGGACACCGACCGAAAGGCGGTTTTCCGAACTTCCCGTCCGGCTGGTGTCCGCATTTATTCTGATCCCGAT GGCGCTTGCGGCTGTCTGGTTGGGTGGATGGTGGTTGGCCACGGCATGTGCCGTATTCGCATTTGTAATGATGCTGGAAT GGTGCGCGATGAGCGCAACATCCAATCAGTACCTGCTAGCCGGCTTGGGTGGCTTGTTTGCGATGTCGTTTCCGCTGCAG CTTACCGAGATGACCGTCGCAATCGCGGTCGCCGCCTACTGCCTGGCCAGCTTTGGTGCGCGTGCCGGTATTCGTTCCAG GGTCTCTGCGGGCTTCGGTGTAATCTACGTGTTTGCAATGGTTGGTGGGCTTTACATGCTTCGCGAGGGGGCGTGGGAAG GCCAATCAGCGGCACTTTATTTCATGTCTTTCGTCTGGGCCTCTGATGCAGCGGCATATTTCTTCGGCCGGGCATTTGGT GGCCCGAAATTGCTCCCCAAAGAAAGCCCGAATAAGACGTGGAGTGGTGCAATTGCTGCTGTTCTGGCGTGCGCCATCTG TGGTTATTTCGCGTCTATGATTGAGGGCGTCGACCATTTCGCCTGGATGGCATGTGGTATTGCAATATCGATAGTGGCTC AGGCGGGCGATTTGTTTGAAAGCGGACTCAAAAGGCGGTTCAAAGTGAAGGACTCAGGCCGGATTCTGCCTGGTCATGGC GGGCTTTTGGATCGAGTTGATGGTTTGGGCGCTGTGGCTGTTGTAGGAAGCATTGCGTTGGCAGTTCACCCCGGTTTAGC AACTGCGCTGGGGCTTTGA
Upstream 100 bases:
>100_bases TCCTGTGGCCCGACTTTGGACGCTCCCATCTGGAAGATGCCCTGAAATGCTATAATGAGCGGGAGCGCAGATATGGCGCT GTCTCTCCGGGAGGGGGCTG
Downstream 100 bases:
>100_bases GGCTCCATGGTGCGCAAGGTTTCCATCTTCGGCTCAACAGGCTCAATCGGGCGGTCCGCGATCGACGTCATTTGCAATGC GAATGAAACAGGCGCCGCCG
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MGDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSATSNQYLLAGLGGLFAMSFPLQ LTEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAMVGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFG GPKLLPKESPNKTWSGAIAAVLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHG GLLDRVDGLGAVAVVGSIALAVHPGLATALGL
Sequences:
>Translated_272_residues MGDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSATSNQYLLAGLGGLFAMSFPLQ LTEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAMVGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFG GPKLLPKESPNKTWSGAIAAVLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHG GLLDRVDGLGAVAVVGSIALAVHPGLATALGL >Mature_271_residues GDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSATSNQYLLAGLGGLFAMSFPLQL TEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAMVGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFGG PKLLPKESPNKTWSGAIAAVLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHGG LLDRVDGLGAVAVVGSIALAVHPGLATALGL
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=147, Percent_Identity=39.4557823129252, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787677, Length=265, Percent_Identity=27.9245283018868, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28735; Mature: 28604
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SNQYLLAGLGGLFAMSFPLQLTEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAM CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFGGPKLLPKESPNKTWSGAIAA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH VLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCC GLLDRVDGLGAVAVVGSIALAVHPGLATALGL CHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure GDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSAT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SNQYLLAGLGGLFAMSFPLQLTEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAM CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFGGPKLLPKESPNKTWSGAIAA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH VLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCC GLLDRVDGLGAVAVVGSIALAVHPGLATALGL CHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA