Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is cdsA [H]

Identifier: 114798911

GI number: 114798911

Start: 1816055

End: 1816873

Strand: Direct

Name: cdsA [H]

Synonym: HNE_1773

Alternate gene names: 114798911

Gene position: 1816055-1816873 (Clockwise)

Preceding gene: 114798355

Following gene: 114799124

Centisome position: 49.02

GC content: 56.04

Gene sequence:

>819_bases
ATGGGTGACTGGACACCGACCGAAAGGCGGTTTTCCGAACTTCCCGTCCGGCTGGTGTCCGCATTTATTCTGATCCCGAT
GGCGCTTGCGGCTGTCTGGTTGGGTGGATGGTGGTTGGCCACGGCATGTGCCGTATTCGCATTTGTAATGATGCTGGAAT
GGTGCGCGATGAGCGCAACATCCAATCAGTACCTGCTAGCCGGCTTGGGTGGCTTGTTTGCGATGTCGTTTCCGCTGCAG
CTTACCGAGATGACCGTCGCAATCGCGGTCGCCGCCTACTGCCTGGCCAGCTTTGGTGCGCGTGCCGGTATTCGTTCCAG
GGTCTCTGCGGGCTTCGGTGTAATCTACGTGTTTGCAATGGTTGGTGGGCTTTACATGCTTCGCGAGGGGGCGTGGGAAG
GCCAATCAGCGGCACTTTATTTCATGTCTTTCGTCTGGGCCTCTGATGCAGCGGCATATTTCTTCGGCCGGGCATTTGGT
GGCCCGAAATTGCTCCCCAAAGAAAGCCCGAATAAGACGTGGAGTGGTGCAATTGCTGCTGTTCTGGCGTGCGCCATCTG
TGGTTATTTCGCGTCTATGATTGAGGGCGTCGACCATTTCGCCTGGATGGCATGTGGTATTGCAATATCGATAGTGGCTC
AGGCGGGCGATTTGTTTGAAAGCGGACTCAAAAGGCGGTTCAAAGTGAAGGACTCAGGCCGGATTCTGCCTGGTCATGGC
GGGCTTTTGGATCGAGTTGATGGTTTGGGCGCTGTGGCTGTTGTAGGAAGCATTGCGTTGGCAGTTCACCCCGGTTTAGC
AACTGCGCTGGGGCTTTGA

Upstream 100 bases:

>100_bases
TCCTGTGGCCCGACTTTGGACGCTCCCATCTGGAAGATGCCCTGAAATGCTATAATGAGCGGGAGCGCAGATATGGCGCT
GTCTCTCCGGGAGGGGGCTG

Downstream 100 bases:

>100_bases
GGCTCCATGGTGCGCAAGGTTTCCATCTTCGGCTCAACAGGCTCAATCGGGCGGTCCGCGATCGACGTCATTTGCAATGC
GAATGAAACAGGCGCCGCCG

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MGDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSATSNQYLLAGLGGLFAMSFPLQ
LTEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAMVGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFG
GPKLLPKESPNKTWSGAIAAVLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHG
GLLDRVDGLGAVAVVGSIALAVHPGLATALGL

Sequences:

>Translated_272_residues
MGDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSATSNQYLLAGLGGLFAMSFPLQ
LTEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAMVGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFG
GPKLLPKESPNKTWSGAIAAVLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHG
GLLDRVDGLGAVAVVGSIALAVHPGLATALGL
>Mature_271_residues
GDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSATSNQYLLAGLGGLFAMSFPLQL
TEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAMVGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFGG
PKLLPKESPNKTWSGAIAAVLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHGG
LLDRVDGLGAVAVVGSIALAVHPGLATALGL

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=147, Percent_Identity=39.4557823129252, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787677, Length=265, Percent_Identity=27.9245283018868, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 28735; Mature: 28604

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure 
GDWTPTERRFSELPVRLVSAFILIPMALAAVWLGGWWLATACAVFAFVMMLEWCAMSAT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SNQYLLAGLGGLFAMSFPLQLTEMTVAIAVAAYCLASFGARAGIRSRVSAGFGVIYVFAM
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VGGLYMLREGAWEGQSAALYFMSFVWASDAAAYFFGRAFGGPKLLPKESPNKTWSGAIAA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
VLACAICGYFASMIEGVDHFAWMACGIAISIVAQAGDLFESGLKRRFKVKDSGRILPGHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCC
GLLDRVDGLGAVAVVGSIALAVHPGLATALGL
CHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA