Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yvbT [H]

Identifier: 114798770

GI number: 114798770

Start: 1412331

End: 1413335

Strand: Reverse

Name: yvbT [H]

Synonym: HNE_1382

Alternate gene names: 114798770

Gene position: 1413335-1412331 (Counterclockwise)

Preceding gene: 114799553

Following gene: 114798946

Centisome position: 38.15

GC content: 64.78

Gene sequence:

>1005_bases
ATGGCCGAACTCTCAATTCTCGAACTCGGCCGTGTCCGCGAAGGCTTCACCCGCACCGACGCCCTCAACGAAGCCCGCCG
CCTCGCCCAGCATGCCGAAAGCCTTGGCTACAAGCGCTTCTGGGTCGCCGAGCATCATAACATGCCCACCGTTACCACGG
CGGCCACATCCCTCGTCATCAGCCATATTGCGGCCGGCACAAAGACCATCCGCGTCGGCGCCGGCGGCATCATGCTGCCC
AATCACGCGCCCTATATCATCGCCGAACAGTTCGGCACGCTCGACGCGCTCTATCCCGGACGGATCGACCTGGGCCTCGG
CCGCGCCCCCGGCACGGACCAGATGACCCTGCGCGCCCTGCGCGTGCATCCCGAGGAAGCCGAACGCTTCCCGCAGGATG
TGGTGGAGCTGCAGATGTGGCTTGGTCCGGTCAATGAAGGCCAGCGCATCGAAGCCGTGCCCGGCTCCAATTCCAACGTC
CCGATCTGGATTCTCGGCTCCAGCCTCTTCGGCGCCCAGCTCGCCGCAGAGCTTGGCCTGCCCTATGGCTTCGCCTCCCA
CTTCGCCCCGCAGGCGCTCGATCAGGCCCTCTCCACCTATCGCTCGCGCTTCAAGCCGAACGAGAAGATGGCCAAGCCCT
ATGCCCTCATTGGTGTGAACATCATCGCCGCCGAAACGGACGAGGAAGCCCGCTACCTCGCAACGTCCCAGCAGATGTCC
TTCGCCAATCTCGTGCGCGGCCAGCGCAAACTGACCCAGCCGCCCATAGACGACATCGACACCTACTGGACCCCGCAGGA
ACGCGCCCAGGCCTCCGCCATGCTGAACTTCAGCATCATCGGCGCCCACGACACCGTCCGCCGCGGCGTCGACGCGCTGC
TGGAGCGGACCCATGCCGATGAGCTGATGATCGTGTCGGATATGTACGACCCCGAGAAGCGCCGCCGCTCGATCGAGATC
ATTGCGGAAGTTCTCGGGAAGAAGGTTGCAGCGCCCGCTTACTGA

Upstream 100 bases:

>100_bases
GGTGAGCTAAACCGGCCCTTTACCGCTGCCGCAGGTTGGCAAAAGGCGCCGCGTGCCCATCTAGGGAGGGCTGAAGCCAG
CCCGATCAAAGGATAAAACC

Downstream 100 bases:

>100_bases
GCGCTGCAAGCCTACCAGCAGACTAATAGTGCGGCGCTACATGCTATGCGCCCAACCGGGCAGCAGACCGAACGCGCCCA
GCGCCATCCAGACCGCCATG

Product: luciferase family monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MAELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVISHIAAGTKTIRVGAGGIMLP
NHAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRALRVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNV
PIWILGSSLFGAQLAAELGLPYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMS
FANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHADELMIVSDMYDPEKRRRSIEI
IAEVLGKKVAAPAY

Sequences:

>Translated_334_residues
MAELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVISHIAAGTKTIRVGAGGIMLP
NHAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRALRVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNV
PIWILGSSLFGAQLAAELGLPYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMS
FANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHADELMIVSDMYDPEKRRRSIEI
IAEVLGKKVAAPAY
>Mature_333_residues
AELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVISHIAAGTKTIRVGAGGIMLPN
HAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRALRVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNVP
IWILGSSLFGAQLAAELGLPYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMSF
ANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHADELMIVSDMYDPEKRRRSIEII
AEVLGKKVAAPAY

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=322, Percent_Identity=47.5155279503106, Blast_Score=328, Evalue=4e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36856; Mature: 36724

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVI
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
SHIAAGTKTIRVGAGGIMLPNHAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRAL
HHHHCCCEEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHH
RVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNVPIWILGSSLFGAQLAAELGL
HCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHCC
PYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHH
FANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHAD
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHCCCC
ELMIVSDMYDPEKRRRSIEIIAEVLGKKVAAPAY
CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AELSILELGRVREGFTRTDALNEARRLAQHAESLGYKRFWVAEHHNMPTVTTAATSLVI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
SHIAAGTKTIRVGAGGIMLPNHAPYIIAEQFGTLDALYPGRIDLGLGRAPGTDQMTLRAL
HHHHCCCEEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHH
RVHPEEAERFPQDVVELQMWLGPVNEGQRIEAVPGSNSNVPIWILGSSLFGAQLAAELGL
HCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHCC
PYGFASHFAPQALDQALSTYRSRFKPNEKMAKPYALIGVNIIAAETDEEARYLATSQQMS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHH
FANLVRGQRKLTQPPIDDIDTYWTPQERAQASAMLNFSIIGAHDTVRRGVDALLERTHAD
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHCCCC
ELMIVSDMYDPEKRRRSIEIIAEVLGKKVAAPAY
CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]