| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is gspN
Identifier: 114798558
GI number: 114798558
Start: 1939978
End: 1940733
Strand: Direct
Name: gspN
Synonym: HNE_1875
Alternate gene names: NA
Gene position: 1939978-1940733 (Clockwise)
Preceding gene: 114799513
Following gene: 114797558
Centisome position: 52.36
GC content: 57.94
Gene sequence:
>756_bases ATGCGTTTCCTGCTCCTCCTGGTCCTGATCGCTGGCTTTGTAATTGGCGTTGTCGCCTTTGCCCCCTTGAGTTTCATTCT GAAAACCAGTGGCGCCGAAGCGCGCGGCCTGAGCTGGACTTCGGCTGAAGGCACGTTGATGGGCGGCAGAATTACCGGCC TTAGAGCTGGCCAGGATGTGCTCGGTGATGCCACGTTGAAGCTCAATCCGGTCTCCCTTCTGGCTCTTGGCATAGAGTAT GATTTCGACTGGGCCGGCCCTTCTGGCAAAGGTACCGGCAAAGCCGCAGCCTATGCGACGGGAACCACGGAGCTTCGAGA CTTTAACATTGAACTCGACTTCGCCGCGCTCGATGGCGTTGCTGCGTGGATACGCCAATCTGGTGGCAAAGCTCGGCTCA CCGGCGACATCATCCGCTTCCGGAAGGGTGCCTGCGATAAAGCCAACGGACAGGCGTGGAGCGACGCGCTGGGAAAAAAC GCCGCCGTTTTAGGGCCCGGTTGGCCGGACATGGCAGGTGAACTTTCCTGTGACGGAGATGCGCTTCTGATACCCTTCAA GTCAGCAAATCCATCCGGCACACAACTCGACGCCACTGCCCGTTTCAATATTGATGGAAACGGCAATCTCGAGGCACGTG TCTCCGGCGTGATTCCGCAACAATACCAATACGGCCTGCCCATTGCCGGCTTCGTTCCTGACGGCAACACATACGTCTAT CGCTATCCTGCTCTGCCTCGCGAGGTGCCAAGATGA
Upstream 100 bases:
>100_bases AAACGGGATTGGGCGTGTCTGTCAGCGCGGCGTCTCTTACACAGAATGCAGATGGCAGCATGGACGCAGACACTGAATTC AGCCTTGATGGTGTCTCATG
Downstream 100 bases:
>100_bases TCCGCTTACTGACTCCTGCATTCCTGGCGCTTTGCATCGGCGCATGTGCCAGTTCGCCTGCAGCTGAACAAGACAGCTCC CCTGCGTCGGCTATGGACTC
Product: general secretion pathway protein N
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDVLGDATLKLNPVSLLALGIEY DFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGVAAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKN AAVLGPGWPDMAGELSCDGDALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY RYPALPREVPR
Sequences:
>Translated_251_residues MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDVLGDATLKLNPVSLLALGIEY DFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGVAAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKN AAVLGPGWPDMAGELSCDGDALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY RYPALPREVPR >Mature_251_residues MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDVLGDATLKLNPVSLLALGIEY DFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGVAAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKN AAVLGPGWPDMAGELSCDGDALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY RYPALPREVPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26397; Mature: 26397
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEECCEEEEEECCCHH LGDATLKLNPVSLLALGIEYDFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGV HCCCEEEECCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEHHHHHH AAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKNAAVLGPGWPDMAGELSCDGD HHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC ALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY EEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHCCCCEEEECCCCCEEEE RYPALPREVPR ECCCCCCCCCC >Mature Secondary Structure MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEECCEEEEEECCCHH LGDATLKLNPVSLLALGIEYDFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGV HCCCEEEECCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEHHHHHH AAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKNAAVLGPGWPDMAGELSCDGD HHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC ALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY EEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHCCCCEEEECCCCCEEEE RYPALPREVPR ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA