Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is gspN

Identifier: 114798558

GI number: 114798558

Start: 1939978

End: 1940733

Strand: Direct

Name: gspN

Synonym: HNE_1875

Alternate gene names: NA

Gene position: 1939978-1940733 (Clockwise)

Preceding gene: 114799513

Following gene: 114797558

Centisome position: 52.36

GC content: 57.94

Gene sequence:

>756_bases
ATGCGTTTCCTGCTCCTCCTGGTCCTGATCGCTGGCTTTGTAATTGGCGTTGTCGCCTTTGCCCCCTTGAGTTTCATTCT
GAAAACCAGTGGCGCCGAAGCGCGCGGCCTGAGCTGGACTTCGGCTGAAGGCACGTTGATGGGCGGCAGAATTACCGGCC
TTAGAGCTGGCCAGGATGTGCTCGGTGATGCCACGTTGAAGCTCAATCCGGTCTCCCTTCTGGCTCTTGGCATAGAGTAT
GATTTCGACTGGGCCGGCCCTTCTGGCAAAGGTACCGGCAAAGCCGCAGCCTATGCGACGGGAACCACGGAGCTTCGAGA
CTTTAACATTGAACTCGACTTCGCCGCGCTCGATGGCGTTGCTGCGTGGATACGCCAATCTGGTGGCAAAGCTCGGCTCA
CCGGCGACATCATCCGCTTCCGGAAGGGTGCCTGCGATAAAGCCAACGGACAGGCGTGGAGCGACGCGCTGGGAAAAAAC
GCCGCCGTTTTAGGGCCCGGTTGGCCGGACATGGCAGGTGAACTTTCCTGTGACGGAGATGCGCTTCTGATACCCTTCAA
GTCAGCAAATCCATCCGGCACACAACTCGACGCCACTGCCCGTTTCAATATTGATGGAAACGGCAATCTCGAGGCACGTG
TCTCCGGCGTGATTCCGCAACAATACCAATACGGCCTGCCCATTGCCGGCTTCGTTCCTGACGGCAACACATACGTCTAT
CGCTATCCTGCTCTGCCTCGCGAGGTGCCAAGATGA

Upstream 100 bases:

>100_bases
AAACGGGATTGGGCGTGTCTGTCAGCGCGGCGTCTCTTACACAGAATGCAGATGGCAGCATGGACGCAGACACTGAATTC
AGCCTTGATGGTGTCTCATG

Downstream 100 bases:

>100_bases
TCCGCTTACTGACTCCTGCATTCCTGGCGCTTTGCATCGGCGCATGTGCCAGTTCGCCTGCAGCTGAACAAGACAGCTCC
CCTGCGTCGGCTATGGACTC

Product: general secretion pathway protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDVLGDATLKLNPVSLLALGIEY
DFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGVAAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKN
AAVLGPGWPDMAGELSCDGDALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY
RYPALPREVPR

Sequences:

>Translated_251_residues
MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDVLGDATLKLNPVSLLALGIEY
DFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGVAAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKN
AAVLGPGWPDMAGELSCDGDALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY
RYPALPREVPR
>Mature_251_residues
MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDVLGDATLKLNPVSLLALGIEY
DFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGVAAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKN
AAVLGPGWPDMAGELSCDGDALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY
RYPALPREVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26397; Mature: 26397

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEECCEEEEEECCCHH
LGDATLKLNPVSLLALGIEYDFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGV
HCCCEEEECCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEHHHHHH
AAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKNAAVLGPGWPDMAGELSCDGD
HHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC
ALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY
EEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHCCCCEEEECCCCCEEEE
RYPALPREVPR
ECCCCCCCCCC
>Mature Secondary Structure
MRFLLLLVLIAGFVIGVVAFAPLSFILKTSGAEARGLSWTSAEGTLMGGRITGLRAGQDV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEECCEEEEEECCCHH
LGDATLKLNPVSLLALGIEYDFDWAGPSGKGTGKAAAYATGTTELRDFNIELDFAALDGV
HCCCEEEECCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEHHHHHH
AAWIRQSGGKARLTGDIIRFRKGACDKANGQAWSDALGKNAAVLGPGWPDMAGELSCDGD
HHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC
ALLIPFKSANPSGTQLDATARFNIDGNGNLEARVSGVIPQQYQYGLPIAGFVPDGNTYVY
EEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCHHHCCCCEEEECCCCCEEEE
RYPALPREVPR
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA