| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797558
Identifier: 114797558
GI number: 114797558
Start: 1940730
End: 1941218
Strand: Direct
Name: 114797558
Synonym: HNE_1876
Alternate gene names: NA
Gene position: 1940730-1941218 (Clockwise)
Preceding gene: 114798558
Following gene: 114797217
Centisome position: 52.38
GC content: 59.3
Gene sequence:
>489_bases ATGATCCGCTTACTGACTCCTGCATTCCTGGCGCTTTGCATCGGCGCATGTGCCAGTTCGCCTGCAGCTGAACAAGACAG CTCCCCTGCGTCGGCTATGGACTCGGTTGCCGCGGACATACCGGTAGAAGGCTTGCCGCCGCAAACGCTCGCCGCAGGCG AATGCGGCCTTTTTCTTTGGGGAATGGCGGCGCCGCGCCGCTTCACATTCTTCACCGAAGCCTCATCCGGTGAAGCCTTG ATGCTTCATGAAGGCGCGCCGATGACGCTTGTGGTGACCGATAGCAATGGCGAAGTTTTCGGCCAGTTTTTCACCCAGAT TCAGTATCTGTCAGCAGACGGCAAATGGTCGGTCAACCTCACCCTCAATCCAGGAGAAGTTCTGGAGGGAGGACAACGTG TAGAGTCCGGCCGCCTGGTTACGACCGGCGCTGACGGCTGGGAAACGGTGCTCCCTGTCACCGGGGTCCGCGCGTGTATT CCTGGATAA
Upstream 100 bases:
>100_bases TTCCGCAACAATACCAATACGGCCTGCCCATTGCCGGCTTCGTTCCTGACGGCAACACATACGTCTATCGCTATCCTGCT CTGCCTCGCGAGGTGCCAAG
Downstream 100 bases:
>100_bases TCGGGCCCGGATAATCGGCCTCCAATGATCAGGTAAGCAGGTCCACCGGCACTGCCAGCGCATCGGACAGGCGCTTGGCA GTCTTGAGGCCGTAGGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MIRLLTPAFLALCIGACASSPAAEQDSSPASAMDSVAADIPVEGLPPQTLAAGECGLFLWGMAAPRRFTFFTEASSGEAL MLHEGAPMTLVVTDSNGEVFGQFFTQIQYLSADGKWSVNLTLNPGEVLEGGQRVESGRLVTTGADGWETVLPVTGVRACI PG
Sequences:
>Translated_162_residues MIRLLTPAFLALCIGACASSPAAEQDSSPASAMDSVAADIPVEGLPPQTLAAGECGLFLWGMAAPRRFTFFTEASSGEAL MLHEGAPMTLVVTDSNGEVFGQFFTQIQYLSADGKWSVNLTLNPGEVLEGGQRVESGRLVTTGADGWETVLPVTGVRACI PG >Mature_162_residues MIRLLTPAFLALCIGACASSPAAEQDSSPASAMDSVAADIPVEGLPPQTLAAGECGLFLWGMAAPRRFTFFTEASSGEAL MLHEGAPMTLVVTDSNGEVFGQFFTQIQYLSADGKWSVNLTLNPGEVLEGGQRVESGRLVTTGADGWETVLPVTGVRACI PG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16864; Mature: 16864
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLLTPAFLALCIGACASSPAAEQDSSPASAMDSVAADIPVEGLPPQTLAAGECGLFLW CCEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE GMAAPRRFTFFTEASSGEALMLHEGAPMTLVVTDSNGEVFGQFFTQIQYLSADGKWSVNL CCCCCCEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHHEEEEECCCCEEEEEE TLNPGEVLEGGQRVESGRLVTTGADGWETVLPVTGVRACIPG EECCHHHHCCCCEECCCEEEEECCCCCEEECCCCCEEEECCC >Mature Secondary Structure MIRLLTPAFLALCIGACASSPAAEQDSSPASAMDSVAADIPVEGLPPQTLAAGECGLFLW CCEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE GMAAPRRFTFFTEASSGEALMLHEGAPMTLVVTDSNGEVFGQFFTQIQYLSADGKWSVNL CCCCCCEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHHEEEEECCCCEEEEEE TLNPGEVLEGGQRVESGRLVTTGADGWETVLPVTGVRACIPG EECCHHHHCCCCEECCCEEEEECCCCCEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA