| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is gspM
Identifier: 114799513
GI number: 114799513
Start: 1939487
End: 1939978
Strand: Direct
Name: gspM
Synonym: HNE_1874
Alternate gene names: NA
Gene position: 1939487-1939978 (Clockwise)
Preceding gene: 114800477
Following gene: 114798558
Centisome position: 52.35
GC content: 58.74
Gene sequence:
>492_bases ATGACCGGCTGGTGGAACACGCGCACTCCGCGCGAGAAAATGCTGCTCGCGATTGCAGGGTTCATCCTGGCAGTCGCCGT CATCTGGCAACTCGTCCTGAACCCGGCGATCCACACCCTTGAAAGGGCAAAGCGCAGTCATGAGCAATCTGCGCAAACCT TGGCGCGTCTGGACCGCATAGAATCGTTGATGCAGCAAGGCGAAACAATCCTCCCTTACGCGACTGCACCGTCCACTCAG GATACGGCAGCCCTCCTGTCAGAGGCTGAACGGATGGCCCGTGAAGGCAACCTGCTGCTCAGCGGCTCGGAGCCTGCAAG CCCCTCTTCCTTCCGGGTGAAACTGTCAGCTGTGTCTGGACCTGCCTTCTTCCAGTGGGTTGAGCAGGTCGAAACGGGAT TGGGCGTGTCTGTCAGCGCGGCGTCTCTTACACAGAATGCAGATGGCAGCATGGACGCAGACACTGAATTCAGCCTTGAT GGTGTCTCATGA
Upstream 100 bases:
>100_bases TAATCTCTTTCCTTCAAAGCAGAGGGTTTCAAGTTACGTCACCAGAGCCCGTAGCCGGCGACGAGAGCTCTACGACACAG ATCATCCTGGAGCCCGTGCC
Downstream 100 bases:
>100_bases TGCGTTTCCTGCTCCTCCTGGTCCTGATCGCTGGCTTTGTAATTGGCGTTGTCGCCTTTGCCCCCTTGAGTTTCATTCTG AAAACCAGTGGCGCCGAAGC
Product: general secretion pathway protein M
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTGWWNTRTPREKMLLAIAGFILAVAVIWQLVLNPAIHTLERAKRSHEQSAQTLARLDRIESLMQQGETILPYATAPSTQ DTAALLSEAERMAREGNLLLSGSEPASPSSFRVKLSAVSGPAFFQWVEQVETGLGVSVSAASLTQNADGSMDADTEFSLD GVS
Sequences:
>Translated_163_residues MTGWWNTRTPREKMLLAIAGFILAVAVIWQLVLNPAIHTLERAKRSHEQSAQTLARLDRIESLMQQGETILPYATAPSTQ DTAALLSEAERMAREGNLLLSGSEPASPSSFRVKLSAVSGPAFFQWVEQVETGLGVSVSAASLTQNADGSMDADTEFSLD GVS >Mature_162_residues TGWWNTRTPREKMLLAIAGFILAVAVIWQLVLNPAIHTLERAKRSHEQSAQTLARLDRIESLMQQGETILPYATAPSTQD TAALLSEAERMAREGNLLLSGSEPASPSSFRVKLSAVSGPAFFQWVEQVETGLGVSVSAASLTQNADGSMDADTEFSLDG VS
Specific function: Unknown
COG id: COG3149
COG function: function code U; Type II secretory pathway, component PulM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17576; Mature: 17445
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWWNTRTPREKMLLAIAGFILAVAVIWQLVLNPAIHTLERAKRSHEQSAQTLARLDRI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLMQQGETILPYATAPSTQDTAALLSEAERMAREGNLLLSGSEPASPSSFRVKLSAVSG HHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCC PAFFQWVEQVETGLGVSVSAASLTQNADGSMDADTEFSLDGVS HHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGWWNTRTPREKMLLAIAGFILAVAVIWQLVLNPAIHTLERAKRSHEQSAQTLARLDRI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLMQQGETILPYATAPSTQDTAALLSEAERMAREGNLLLSGSEPASPSSFRVKLSAVSG HHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCC PAFFQWVEQVETGLGVSVSAASLTQNADGSMDADTEFSLDGVS HHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA