Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yfhR [C]

Identifier: 114798177

GI number: 114798177

Start: 764335

End: 765243

Strand: Reverse

Name: yfhR [C]

Synonym: HNE_0757

Alternate gene names: 114798177

Gene position: 765243-764335 (Counterclockwise)

Preceding gene: 114798967

Following gene: 114797404

Centisome position: 20.65

GC content: 65.13

Gene sequence:

>909_bases
ATGAAAACTTTTGCCGCGATCAGCCTTGCTGCCACCGCCCTGCTTGCCGCCTGCACGACGCCTGTCGCGCTGGCGCCGGA
AGCCACGCTCACCGGACGTTACGCCGATCCAGCCGCGATTGATCCGGACCATCCGCCCGCGCTGATGGAGCTCAACTTCG
AGAGCGGCGGCGCGCGCCTCAACGGCCTGATCTATCTGGCGGACGGTGCGGGGCCCCACCCGACGGTGGTTCTGCTGCAT
GGCTATCCGGGCAATGAAAAGAACCTCGACCTGGCGCAGGCGATGCGCCGCGAGGGCTTCAATGTGATGTTCTTCCACTA
TCGCGGCGCCTGGGGCAGCGACGGCAATTTCAGCTTCAGCAATGTGGTCGAGGACGTCGGCGCAGCGACAGGCTTCCTGC
GCGCCAATGCCGGCACCTACCGGACTGATCCGGAGAAGCTGATTTTGATCGGCCATTCGATGGGCGGCTTTGCGGCCTTT
TCGGCCGCGGCCAATGACAGCCGCGTTGCCTGCGCCGCCGGGCTGGCGCCTGCCGATTTCGGCGTTCTGGGCGCCGCCAT
GGCAGCCAACCCGGAGGTTCTGGAGGGCTTTTCGGGCTATACCGACACGCTGAGCATGCTGAAGGGCTTCTCTGGCGAAG
CGGCCATTGTGGAACTGTTTTCGAATGCCGCGGCCTTTGACCTGCGCGCCAAGGCGCCCGAGCTTGCGGGCAAGTCGGTT
CTGATTGTGGCGGGCGACGCGGATGAAAGCACGCCGCTGGAAGGCATGATCCAGCCGTTGATGGATGCGTATGAGGCGGC
GCCGGACATCGAGACGACCCTTGTGGTGCTGCCGGGGGATCACTCCTTCTCCTGGTCGCGGGCAGCGCTAATCGACACGG
TGATCGGCTGGGCAGACGGCTGCCGCTGA

Upstream 100 bases:

>100_bases
AAAAAGAGAAGACCCCGCCGGTTTGCGCCGGCGGGGTTTTTCTTTGCCGCTGGCGGGCGCGCCCCGCCGCTGATACCCTC
CGTGCAAGGGAGACACTGCC

Downstream 100 bases:

>100_bases
AACGCCTGAAGCGCGAGACATCTTTCCTCCGCGCGTTCTGGCGGCTAACGGTGCCCGGATGATGGATACTGTTGTTTTTG
ATACGTTGCTGATGGCCTTC

Product: putative lipoprotein

Products: NA

Alternate protein names: Histidine Triad Protein; Alpha/Beta Hydrolase

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARLNGLIYLADGAGPHPTVVLLH
GYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFSNVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAF
SAAANDSRVACAAGLAPADFGVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV
LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADGCR

Sequences:

>Translated_302_residues
MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARLNGLIYLADGAGPHPTVVLLH
GYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFSNVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAF
SAAANDSRVACAAGLAPADFGVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV
LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADGCR
>Mature_302_residues
MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARLNGLIYLADGAGPHPTVVLLH
GYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFSNVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAF
SAAANDSRVACAAGLAPADFGVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV
LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADGCR

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31333; Mature: 31333

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARL
CCCHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEE
NGLIYLADGAGPHPTVVLLHGYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFS
EEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCHH
NVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAFSAAANDSRVACAAGLAPADF
HHHHHHHHHHCEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCHH
GVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV
HHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEE
LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADG
EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC
CR
CC
>Mature Secondary Structure
MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARL
CCCHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEE
NGLIYLADGAGPHPTVVLLHGYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFS
EEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCHH
NVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAFSAAANDSRVACAAGLAPADF
HHHHHHHHHHCEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCHH
GVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV
HHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEE
LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADG
EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC
CR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA