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The map label for this gene is 114798143

Identifier: 114798143

GI number: 114798143

Start: 2372760

End: 2373230

Strand: Reverse

Name: 114798143

Synonym: HNE_2272

Alternate gene names: NA

Gene position: 2373230-2372760 (Counterclockwise)

Preceding gene: 114798964

Following gene: 114798716

Centisome position: 64.05

GC content: 66.67

Gene sequence:

>471_bases
ATGCAGCCAGCAGCCCCCGAATGGTGGTTCTACCATCTCTCGCGCAGCGCGCTGGAGGAGGCCGCCGCGCCGCTCCTGCA
GAAATGCCTCGAAGTCGGCTGGCGCGTGCTCGCCGTGTCTCCGCGTGCGGAGCGTCTGGCAAAGCTCGACGCCGTGCTCT
GGACCTTCGACGACGCCTCCTTCCTGCCGCATGGCCAGGCCGATGCGCCGGGTCTGGATGTCGCCCGCCAGCCAGTGCTG
CTGTCGGCAAAGCTCACCAACGCCAACAGCGCCGATGCCCTGATGCTGATGGACGGCGTGGAGGCGCCGGTGGACGTGGC
CTTCAAGCGCTGCATGGTGATGTTCGAAGACGCCGACACCGGCACCCGCAACAAGGCGCGCGCCCAGTTCAAGGCCGCAA
AAGATGCCGGCCTCACCACCCGCTATTTTCAGCAGACGGAACGTGGCGGCTGGAAAGAGGCGGGGGTTTAA

Upstream 100 bases:

>100_bases
CGGCCCCGCCTGTTTCCGAGCGCCCCCGCTTAAGGCGGGGGCCTCGATTGACCATAACAGACCCCCGCCTTCGCGGGGGT
TAGCGGAGAGAGGGTTGAGC

Downstream 100 bases:

>100_bases
CGATCCTCAAAACCCTCCGTGTGCGTTACCCTCGACGGGCGCAGCCCGTCTGAGGGTGGAGCAGGGCAGGCTCAGCCTGT
CAGTCGCATGCGGGCGTTTT

Product: putative DNA polymerase III chi subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Chi Subunit HolC; DNA Polymerase III Chi Subunit; DNA Polymerase III Subunit Chi HolC; DNA Polymerase III Chi Subunit Superfamily; DNA Polymerase III Chi Subunit Holc; DNA Polymerase III

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MQPAAPEWWFYHLSRSALEEAAAPLLQKCLEVGWRVLAVSPRAERLAKLDAVLWTFDDASFLPHGQADAPGLDVARQPVL
LSAKLTNANSADALMLMDGVEAPVDVAFKRCMVMFEDADTGTRNKARAQFKAAKDAGLTTRYFQQTERGGWKEAGV

Sequences:

>Translated_156_residues
MQPAAPEWWFYHLSRSALEEAAAPLLQKCLEVGWRVLAVSPRAERLAKLDAVLWTFDDASFLPHGQADAPGLDVARQPVL
LSAKLTNANSADALMLMDGVEAPVDVAFKRCMVMFEDADTGTRNKARAQFKAAKDAGLTTRYFQQTERGGWKEAGV
>Mature_156_residues
MQPAAPEWWFYHLSRSALEEAAAPLLQKCLEVGWRVLAVSPRAERLAKLDAVLWTFDDASFLPHGQADAPGLDVARQPVL
LSAKLTNANSADALMLMDGVEAPVDVAFKRCMVMFEDADTGTRNKARAQFKAAKDAGLTTRYFQQTERGGWKEAGV

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 17151; Mature: 17151

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPAAPEWWFYHLSRSALEEAAAPLLQKCLEVGWRVLAVSPRAERLAKLDAVLWTFDDAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEECCCCC
FLPHGQADAPGLDVARQPVLLSAKLTNANSADALMLMDGVEAPVDVAFKRCMVMFEDADT
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
GTRNKARAQFKAAKDAGLTTRYFQQTERGGWKEAGV
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQPAAPEWWFYHLSRSALEEAAAPLLQKCLEVGWRVLAVSPRAERLAKLDAVLWTFDDAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEECCCCC
FLPHGQADAPGLDVARQPVLLSAKLTNANSADALMLMDGVEAPVDVAFKRCMVMFEDADT
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
GTRNKARAQFKAAKDAGLTTRYFQQTERGGWKEAGV
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA