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The map label for this gene is 114798055

Identifier: 114798055

GI number: 114798055

Start: 3702356

End: 3702799

Strand: Reverse

Name: 114798055

Synonym: HNE_3566

Alternate gene names: NA

Gene position: 3702799-3702356 (Counterclockwise)

Preceding gene: 114798830

Following gene: 114798602

Centisome position: 99.94

GC content: 53.6

Gene sequence:

>444_bases
GTGGATCTGTATAACTGGCTGAAGGCTGGCCATGTCATTTTTGTCGTCGCTTTGATGGCAGCCCTGCTTGTTTATCCCCG
CTACAAAATCCACCAGCTCTCCAGCACGCCGGGAGAGCCCCTTTTTGAAGCGATGAAAAAATCGTCCGGCCAGTTGAGAA
TGATCATTCTCAATCCGAGCCTCATCCTCGTCTGGCTGTTCGGTTTGGGAATGGTGTTTGTCGACTGGCAGCGCGGTGGG
CAGCTGTACCTGGAAGGGTGGTTTCACGCGAAACTGCTTCTCGTGCTCACTCTTTCCGGCATGCACGGATATTTCATCGG
CGTCGGCAAAAAGGTCGATAACGTAACCGGCACGGTCCAGGCGAAGACGCTGCGGATGCTGAACGAGATCCCTTTCCTTT
TGTTGATCGCGATTGCGATCCTGGTGATCGTGAAGCCTTTCTGA

Upstream 100 bases:

>100_bases
CGTCTCTGCCCGTCTGGTTGGAGTGGGTGCCCGCAGGCCGAATTGAAACAGAAAGCCGGCGTGCGCATTACTGAAACCGC
CGGCTGAGGGGAGATGCCAA

Downstream 100 bases:

>100_bases
CAGGGGCGCCGCCAGTATTGCTTGACGCGCCCGGCCTTTCTGACAGATAAGACCCCAGCTGGTCGCCGAGTCCTTTGGCG
CTGCGATGTATTTTCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MDLYNWLKAGHVIFVVALMAALLVYPRYKIHQLSSTPGEPLFEAMKKSSGQLRMIILNPSLILVWLFGLGMVFVDWQRGG
QLYLEGWFHAKLLLVLTLSGMHGYFIGVGKKVDNVTGTVQAKTLRMLNEIPFLLLIAIAILVIVKPF

Sequences:

>Translated_147_residues
MDLYNWLKAGHVIFVVALMAALLVYPRYKIHQLSSTPGEPLFEAMKKSSGQLRMIILNPSLILVWLFGLGMVFVDWQRGG
QLYLEGWFHAKLLLVLTLSGMHGYFIGVGKKVDNVTGTVQAKTLRMLNEIPFLLLIAIAILVIVKPF
>Mature_147_residues
MDLYNWLKAGHVIFVVALMAALLVYPRYKIHQLSSTPGEPLFEAMKKSSGQLRMIILNPSLILVWLFGLGMVFVDWQRGG
QLYLEGWFHAKLLLVLTLSGMHGYFIGVGKKVDNVTGTVQAKTLRMLNEIPFLLLIAIAILVIVKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16527; Mature: 16527

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLYNWLKAGHVIFVVALMAALLVYPRYKIHQLSSTPGEPLFEAMKKSSGQLRMIILNPS
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHCCCCCEEEEEECCH
LILVWLFGLGMVFVDWQRGGQLYLEGWFHAKLLLVLTLSGMHGYFIGVGKKVDNVTGTVQ
HHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH
AKTLRMLNEIPFLLLIAIAILVIVKPF
HHHHHHHHHCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLYNWLKAGHVIFVVALMAALLVYPRYKIHQLSSTPGEPLFEAMKKSSGQLRMIILNPS
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHHHCCCCCEEEEEECCH
LILVWLFGLGMVFVDWQRGGQLYLEGWFHAKLLLVLTLSGMHGYFIGVGKKVDNVTGTVQ
HHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH
AKTLRMLNEIPFLLLIAIAILVIVKPF
HHHHHHHHHCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]