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The map label for this gene is atpH

Identifier: 114798041

GI number: 114798041

Start: 1961911

End: 1962456

Strand: Reverse

Name: atpH

Synonym: HNE_1895

Alternate gene names: 114798041

Gene position: 1962456-1961911 (Counterclockwise)

Preceding gene: 114797126

Following gene: 114799519

Centisome position: 52.97

GC content: 57.88

Gene sequence:

>546_bases
GTGATCCAGACAAGCGAAACGGCCCAGCGCTACGCCCGCGCACTCTTTGAGTTGGCGCAGGATAAGGGCGACCTCGCCAC
GATCCATAAAGATTTCAGGGCTTTCGCTGCACTTATCAAAACATCGGCCGATCTGCGCAAGCTGCTCGACTCGCCCGCAT
TCAGCCGCGATGTGAAGGTTTCTGCGCTCGCTGAAATCGCCAAGAAAGCGGGCTATTCGCCCCTGTTCGGAAAATTCCTC
GGCACGATGGCCACCAATGGCCGCGCCAACGACATTCTGGGCGCCGAATTCGCGTTTGACCAATTCTATGCGAAACAGCG
CGGCGTACAGCGCGCGATAGTTCGCACAGCTAAAGAAATGACCGGCGCTGAAAAGTCCCGGATTGAATCGCTGCTCGCGC
GTGTCGTTGGCGGCGATGTTGAACTCACAAGCGAGGTTGACCCCTCGCTGATTGGCGGCATTCAGCTGCGCCTGGGCTCC
AAGCTCGTGGACGCCAGCGTCGCCAAGAAACTTGAACGCATGAACACCGTGATGAAGGGAGCATAA

Upstream 100 bases:

>100_bases
TGGGGGGGTGCCCGTTTCGCGAGCATCGCCCGCCTGACTTTTATTAGGGCACTTCCGCCCCCTAACTGAGACGGATTTCA
AGACCTTGCCTGCCTCGAAC

Downstream 100 bases:

>100_bases
GAAGCTCGATGGACATTTCACCTGCAGAAATTTCGGGCATCCTGAAGTCCCAGATCGAGAATTTCGGCGTCGAAGCTGAA
GTCTCGGATGTTGGCCAGGT

Product: ATP synthase F1 subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MIQTSETAQRYARALFELAQDKGDLATIHKDFRAFAALIKTSADLRKLLDSPAFSRDVKVSALAEIAKKAGYSPLFGKFL
GTMATNGRANDILGAEFAFDQFYAKQRGVQRAIVRTAKEMTGAEKSRIESLLARVVGGDVELTSEVDPSLIGGIQLRLGS
KLVDASVAKKLERMNTVMKGA

Sequences:

>Translated_181_residues
MIQTSETAQRYARALFELAQDKGDLATIHKDFRAFAALIKTSADLRKLLDSPAFSRDVKVSALAEIAKKAGYSPLFGKFL
GTMATNGRANDILGAEFAFDQFYAKQRGVQRAIVRTAKEMTGAEKSRIESLLARVVGGDVELTSEVDPSLIGGIQLRLGS
KLVDASVAKKLERMNTVMKGA
>Mature_181_residues
MIQTSETAQRYARALFELAQDKGDLATIHKDFRAFAALIKTSADLRKLLDSPAFSRDVKVSALAEIAKKAGYSPLFGKFL
GTMATNGRANDILGAEFAFDQFYAKQRGVQRAIVRTAKEMTGAEKSRIESLLARVVGGDVELTSEVDPSLIGGIQLRLGS
KLVDASVAKKLERMNTVMKGA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Homo sapiens, GI4502303, Length=172, Percent_Identity=29.6511627906977, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI71984710, Length=174, Percent_Identity=26.4367816091954, Blast_Score=74, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71984717, Length=174, Percent_Identity=26.4367816091954, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24647054, Length=174, Percent_Identity=32.7586206896552, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24647056, Length=123, Percent_Identity=32.520325203252, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_HYPNA (Q0C0Z7)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_760596.1
- ProteinModelPortal:   Q0C0Z7
- SMR:   Q0C0Z7
- STRING:   Q0C0Z7
- GeneID:   4287196
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_1895
- NMPDR:   fig|228405.5.peg.1824
- TIGR:   HNE_1895
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   SIGDKYV
- PhylomeDB:   Q0C0Z7
- BioCyc:   HNEP81032:HNE_1895-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19628; Mature: 19628

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTSETAQRYARALFELAQDKGDLATIHKDFRAFAALIKTSADLRKLLDSPAFSRDVKV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SALAEIAKKAGYSPLFGKFLGTMATNGRANDILGAEFAFDQFYAKQRGVQRAIVRTAKEM
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGAEKSRIESLLARVVGGDVELTSEVDPSLIGGIQLRLGSKLVDASVAKKLERMNTVMKG
HCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MIQTSETAQRYARALFELAQDKGDLATIHKDFRAFAALIKTSADLRKLLDSPAFSRDVKV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SALAEIAKKAGYSPLFGKFLGTMATNGRANDILGAEFAFDQFYAKQRGVQRAIVRTAKEM
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGAEKSRIESLLARVVGGDVELTSEVDPSLIGGIQLRLGSKLVDASVAKKLERMNTVMKG
HCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA