| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is btuE [C]
Identifier: 114797596
GI number: 114797596
Start: 3239431
End: 3240036
Strand: Direct
Name: btuE [C]
Synonym: HNE_3064
Alternate gene names: 114797596
Gene position: 3239431-3240036 (Clockwise)
Preceding gene: 114800006
Following gene: 114798386
Centisome position: 87.43
GC content: 64.85
Gene sequence:
>606_bases ATGCGCCTTGCGATCCTTGCCCTTGCCGCCCCCTTTCTGGCGGCCGCCTGCGCTGAGGCAACGGCCGGCCAGCCCACGGC CAACGCCCCTGCTGCTCCAACAGAATTCCAGGCCGAGGAGCCCGCGCCCGCCATGTCCGCCACCCAGTTCACCAGCATCA CCGGCCAGCCGCTCGACCTCACCGCCCTCGGCGCGAAGGCCATCCTGGTGGTAAACACCGCCTCGCGGTGCGGGTACACG CCCCAATATGCCGGCCTCCAGAAACTCTACGAAGCCAACAAGGCGGACGGCCTGGTGATCGTCGGCGTCCCGTCCAATGA TTTTGGCGGACAGGAGCCAGGCACCGAAGAGGACGTCAAATCCTTCTGCGAGATCAATTACGGCGTCACCTTCCCGCTGA CGAAGAAGTACGCCGTCACAGGCGCGTCGCAGCACCCCTTCTATACCGGCGCCATCAAGACGCTGGGCGATCCCGCCCTG CCGAAATGGAACTTCCACAAAATCCTCGTCAGCGCAGATGGCACGCCGCTCAAGGCCTATGCGTCTTCGGTAAAGCCCGA TGACTCCGGCCTCGCCGCCGACATCGAAGCAGCGCTCGGCATCTGA
Upstream 100 bases:
>100_bases GGCACCCGCGCCAACCTCACAAGCATTTCATATTTGTCAGGGATGACGCGCCCCCGCTGCGCTTATAGTCTGTTGTGGAA ATGCCACAGGAGACGCGCTG
Downstream 100 bases:
>100_bases TAAGGTCAGGCTTGCCCGCCGCCCGGCCTTGACGAAGCGGCATGTCCGGCGCCTATTCTCCCGCGCTGCACAAGAACGCA AAGTCAGGAAGGAAATAGCC
Product: glutathione peroxidase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MRLAILALAAPFLAAACAEATAGQPTANAPAAPTEFQAEEPAPAMSATQFTSITGQPLDLTALGAKAILVVNTASRCGYT PQYAGLQKLYEANKADGLVIVGVPSNDFGGQEPGTEEDVKSFCEINYGVTFPLTKKYAVTGASQHPFYTGAIKTLGDPAL PKWNFHKILVSADGTPLKAYASSVKPDDSGLAADIEAALGI
Sequences:
>Translated_201_residues MRLAILALAAPFLAAACAEATAGQPTANAPAAPTEFQAEEPAPAMSATQFTSITGQPLDLTALGAKAILVVNTASRCGYT PQYAGLQKLYEANKADGLVIVGVPSNDFGGQEPGTEEDVKSFCEINYGVTFPLTKKYAVTGASQHPFYTGAIKTLGDPAL PKWNFHKILVSADGTPLKAYASSVKPDDSGLAADIEAALGI >Mature_201_residues MRLAILALAAPFLAAACAEATAGQPTANAPAAPTEFQAEEPAPAMSATQFTSITGQPLDLTALGAKAILVVNTASRCGYT PQYAGLQKLYEANKADGLVIVGVPSNDFGGQEPGTEEDVKSFCEINYGVTFPLTKKYAVTGASQHPFYTGAIKTLGDPAL PKWNFHKILVSADGTPLKAYASSVKPDDSGLAADIEAALGI
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI15618997, Length=139, Percent_Identity=35.9712230215827, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI192455698, Length=160, Percent_Identity=31.25, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI75709200, Length=185, Percent_Identity=31.3513513513514, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI90903240, Length=150, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI41406084, Length=172, Percent_Identity=30.8139534883721, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI4557629, Length=150, Percent_Identity=34, Blast_Score=68, Evalue=5e-12, Organism=Escherichia coli, GI1788003, Length=178, Percent_Identity=31.4606741573034, Blast_Score=108, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17506887, Length=150, Percent_Identity=34, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535473, Length=148, Percent_Identity=35.1351351351351, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71993584, Length=144, Percent_Identity=31.25, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322228, Length=149, Percent_Identity=44.2953020134228, Blast_Score=133, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6319721, Length=150, Percent_Identity=41.3333333333333, Blast_Score=127, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6322826, Length=150, Percent_Identity=36.6666666666667, Blast_Score=112, Evalue=5e-26, Organism=Drosophila melanogaster, GI85726443, Length=153, Percent_Identity=35.9477124183007, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24656772, Length=168, Percent_Identity=35.1190476190476, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24656777, Length=168, Percent_Identity=35.1190476190476, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI24656767, Length=172, Percent_Identity=36.6279069767442, Blast_Score=70, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 20747; Mature: 20747
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAILALAAPFLAAACAEATAGQPTANAPAAPTEFQAEEPAPAMSATQFTSITGQPLDL CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCEE TALGAKAILVVNTASRCGYTPQYAGLQKLYEANKADGLVIVGVPSNDFGGQEPGTEEDVK EECCCEEEEEEECHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHH SFCEINYGVTFPLTKKYAVTGASQHPFYTGAIKTLGDPALPKWNFHKILVSADGTPLKAY HHHHCCCCEECCCCCEEEECCCCCCCEEECHHHHCCCCCCCCCCCEEEEEECCCCCHHHH ASSVKPDDSGLAADIEAALGI HHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MRLAILALAAPFLAAACAEATAGQPTANAPAAPTEFQAEEPAPAMSATQFTSITGQPLDL CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCEE TALGAKAILVVNTASRCGYTPQYAGLQKLYEANKADGLVIVGVPSNDFGGQEPGTEEDVK EECCCEEEEEEECHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHH SFCEINYGVTFPLTKKYAVTGASQHPFYTGAIKTLGDPALPKWNFHKILVSADGTPLKAY HHHHCCCCEECCCCCEEEECCCCCCCEEECHHHHCCCCCCCCCCCEEEEEECCCCCHHHH ASSVKPDDSGLAADIEAALGI HHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]