| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is nadE [H]
Identifier: 114797585
GI number: 114797585
Start: 2730114
End: 2731781
Strand: Direct
Name: nadE [H]
Synonym: HNE_2577
Alternate gene names: 114797585
Gene position: 2730114-2731781 (Clockwise)
Preceding gene: 114800543
Following gene: 114799057
Centisome position: 73.69
GC content: 64.27
Gene sequence:
>1668_bases ATGCTCATCATGAGCAATAATCTTCGCATTCTGGCGGCCCAGCTGAACCCCGTTGTGGGCGACATCAAAGGCAATCTGGC GCTTGCGCGGGAGGCCTATGGCGAGGCCCGCGCCAAGGGTGCCCATCTTCTCGTGCTGAGCGAGCATTTCCTGCTGGGCT ACCCGGCCGAGGACCTCGTGCTGAAACCGTCGGCGGTCGAGCAGTCGATGGACGCCGTGCGCGCGCTGGCACAGGAAACA AAGGATGGCCCGGCCATTCTCATCGGTACACCCTGGTCTGAAGAGGGCCGGCTCTACAACTCCGCCTGCTTCCTCGGCGG CGGCCTGATCAAGGCGCGCTACGACAAACGCGAACTGCCCAATTACGGCGTGTTCGACGAGAAGCGCCACTACACGCCCG GCGAAGGCCCGCCTCTGGTGGTGGAGCTGCACGGCGTGCGCGTCGGCGTGGCAATCTGTGAGGACATCTGGCTGGAGCGC GTGCCCCGCGCCACCCATGCAGCCGGCGCCGAGCTGCTGATCGTGCCCAACGCCTCGCCCTGGCGCCGTGCCATCCAGGC CGAACGCGCCAACGCCTTCGACCGCTGGGCCGACCTGAAACTGCCCTACCTGTTCGTCAACCAGATGGGCGGGCAGGACG AGCTCGTTTTCGATGGCGCCTCCTTTGCCACCAACGGAACGCATGGCGAGCGCTGCGGCCTCGTCGGCCAGTTCGAGACC GGCACAGCGCTCGTCGAATTTGATCCGTCCACGAAGCAATTCTCCGGTCTCGGCCAGAGCTGCGCGGCAGACCTTGAAGG CTGGCCCGCCGAATATCGCGCCGCCATGCAGGGGCTGGGCGATTATGTGCGCAAGAACCGCTTCCCCGGCGTCGTGCTTG GCATGTCGGGCGGCATCGACAGCGCCATCACCGCCGCCATCGCCGCCGATGCTCTGGGCCCGGACAAGGTCTGGTGCGTG ATGATGCCATCGAAATATACCAGCAATGACAGCCTCGAAGACGCCAAAGCCTGCGCGCAGGCGCTCGGCTGCCGCTATGA CACGATCAATATCCATCCGGGCGTCGAGGCGCTGGACACGATGCTGGGCGACGTCTTTGCGGGCAAGAAGGCAGACATCA CCGAAGAGAACATCCAGTCCCGCCTGCGCGCGGTCACCCTGATGGCGCTGTCCAACAAGTTCGGCCAGATGGTCGTCACC ACCGGCAACAAGAGCGAGATGGCCGTTGGCTACGCCACGCTCTATGGCGACATGTGCGGAGGCTACAACGCGCTGAAGGA TTTCTACAAGACCGAAGTGTTCGAGCTGTCGAAATGGCGCAATGCGGTGCACCCCAAAGACGCGCTCGCGCCCGCCGGTG AAGTGATCCCGGAACGGATCATCACCAAACCGCCCTCGGCCGAACTGCGCGAAGACCAGAAGGACGAGGATTCCCTGCCG CCCTATGAAGTGCTGGACGACATCCTGCGCGGGCTGGTGGACCTGGAAGAAGACGTGGACGACATTCTCGCGCGCGGCCA TGACGCGGCCACCGTGCGGCGGATTGAACATCTCGTCTACATCGCCGAATACAAGCGCCGCCAAGCTCCGCCGGGCGTGA AAGTCGGCGGCAAGAATTTCGGCCGCGACCGGCGCTATCCGATCACCAACCGCTTCCGGGACGATTGA
Upstream 100 bases:
>100_bases CCACCCGAACACCCCGCAAACCCGGATGGCCCCGCCAGTCCGGCTAAAGGCGTATGGAGAGGGCCCATCCCCTGATGACA TCGCCCGCGCATCATCCTAA
Downstream 100 bases:
>100_bases GGCGTTATTCTACCGTTGGCGGCTCGATGGTCGACGCGGTCGGGTCCAGCCCGAAAGAATCGATCGCCATCATTTCGCGC ACCGTCTCGACCTCTTCGGG
Product: glutamine-dependent NAD(+) synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MLIMSNNLRILAAQLNPVVGDIKGNLALAREAYGEARAKGAHLLVLSEHFLLGYPAEDLVLKPSAVEQSMDAVRALAQET KDGPAILIGTPWSEEGRLYNSACFLGGGLIKARYDKRELPNYGVFDEKRHYTPGEGPPLVVELHGVRVGVAICEDIWLER VPRATHAAGAELLIVPNASPWRRAIQAERANAFDRWADLKLPYLFVNQMGGQDELVFDGASFATNGTHGERCGLVGQFET GTALVEFDPSTKQFSGLGQSCAADLEGWPAEYRAAMQGLGDYVRKNRFPGVVLGMSGGIDSAITAAIAADALGPDKVWCV MMPSKYTSNDSLEDAKACAQALGCRYDTINIHPGVEALDTMLGDVFAGKKADITEENIQSRLRAVTLMALSNKFGQMVVT TGNKSEMAVGYATLYGDMCGGYNALKDFYKTEVFELSKWRNAVHPKDALAPAGEVIPERIITKPPSAELREDQKDEDSLP PYEVLDDILRGLVDLEEDVDDILARGHDAATVRRIEHLVYIAEYKRRQAPPGVKVGGKNFGRDRRYPITNRFRDD
Sequences:
>Translated_555_residues MLIMSNNLRILAAQLNPVVGDIKGNLALAREAYGEARAKGAHLLVLSEHFLLGYPAEDLVLKPSAVEQSMDAVRALAQET KDGPAILIGTPWSEEGRLYNSACFLGGGLIKARYDKRELPNYGVFDEKRHYTPGEGPPLVVELHGVRVGVAICEDIWLER VPRATHAAGAELLIVPNASPWRRAIQAERANAFDRWADLKLPYLFVNQMGGQDELVFDGASFATNGTHGERCGLVGQFET GTALVEFDPSTKQFSGLGQSCAADLEGWPAEYRAAMQGLGDYVRKNRFPGVVLGMSGGIDSAITAAIAADALGPDKVWCV MMPSKYTSNDSLEDAKACAQALGCRYDTINIHPGVEALDTMLGDVFAGKKADITEENIQSRLRAVTLMALSNKFGQMVVT TGNKSEMAVGYATLYGDMCGGYNALKDFYKTEVFELSKWRNAVHPKDALAPAGEVIPERIITKPPSAELREDQKDEDSLP PYEVLDDILRGLVDLEEDVDDILARGHDAATVRRIEHLVYIAEYKRRQAPPGVKVGGKNFGRDRRYPITNRFRDD >Mature_555_residues MLIMSNNLRILAAQLNPVVGDIKGNLALAREAYGEARAKGAHLLVLSEHFLLGYPAEDLVLKPSAVEQSMDAVRALAQET KDGPAILIGTPWSEEGRLYNSACFLGGGLIKARYDKRELPNYGVFDEKRHYTPGEGPPLVVELHGVRVGVAICEDIWLER VPRATHAAGAELLIVPNASPWRRAIQAERANAFDRWADLKLPYLFVNQMGGQDELVFDGASFATNGTHGERCGLVGQFET GTALVEFDPSTKQFSGLGQSCAADLEGWPAEYRAAMQGLGDYVRKNRFPGVVLGMSGGIDSAITAAIAADALGPDKVWCV MMPSKYTSNDSLEDAKACAQALGCRYDTINIHPGVEALDTMLGDVFAGKKADITEENIQSRLRAVTLMALSNKFGQMVVT TGNKSEMAVGYATLYGDMCGGYNALKDFYKTEVFELSKWRNAVHPKDALAPAGEVIPERIITKPPSAELREDQKDEDSLP PYEVLDDILRGLVDLEEDVDDILARGHDAATVRRIEHLVYIAEYKRRQAPPGVKVGGKNFGRDRRYPITNRFRDD
Specific function: It is not known if this NAD synthase uses NH(3) or glutamine as the N donor [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 60717; Mature: 60717
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIMSNNLRILAAQLNPVVGDIKGNLALAREAYGEARAKGAHLLVLSEHFLLGYPAEDLV CEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEECCCCHHCE LKPSAVEQSMDAVRALAQETKDGPAILIGTPWSEEGRLYNSACFLGGGLIKARYDKRELP ECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCEECCCEEEEECCHHCCC NYGVFDEKRHYTPGEGPPLVVELHGVRVGVAICEDIWLERVPRATHAAGAELLIVPNASP CCCCCCCCCCCCCCCCCEEEEEECCEEEHHHHHHHHHHHHCCCHHHHCCCEEEEECCCCH WRRAIQAERANAFDRWADLKLPYLFVNQMGGQDELVFDGASFATNGTHGERCGLVGQFET HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEECC GTALVEFDPSTKQFSGLGQSCAADLEGWPAEYRAAMQGLGDYVRKNRFPGVVLGMSGGID CCEEEEECCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH SAITAAIAADALGPDKVWCVMMPSKYTSNDSLEDAKACAQALGCRYDTINIHPGVEALDT HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHH MLGDVFAGKKADITEENIQSRLRAVTLMALSNKFGQMVVTTGNKSEMAVGYATLYGDMCG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHCC GYNALKDFYKTEVFELSKWRNAVHPKDALAPAGEVIPERIITKPPSAELREDQKDEDSLP CHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCC PYEVLDDILRGLVDLEEDVDDILARGHDAATVRRIEHLVYIAEYKRRQAPPGVKVGGKNF CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC GRDRRYPITNRFRDD CCCCCCCCCCCCCCC >Mature Secondary Structure MLIMSNNLRILAAQLNPVVGDIKGNLALAREAYGEARAKGAHLLVLSEHFLLGYPAEDLV CEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEECCCCHHCE LKPSAVEQSMDAVRALAQETKDGPAILIGTPWSEEGRLYNSACFLGGGLIKARYDKRELP ECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEECCCEECCCEEEEECCHHCCC NYGVFDEKRHYTPGEGPPLVVELHGVRVGVAICEDIWLERVPRATHAAGAELLIVPNASP CCCCCCCCCCCCCCCCCEEEEEECCEEEHHHHHHHHHHHHCCCHHHHCCCEEEEECCCCH WRRAIQAERANAFDRWADLKLPYLFVNQMGGQDELVFDGASFATNGTHGERCGLVGQFET HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEECC GTALVEFDPSTKQFSGLGQSCAADLEGWPAEYRAAMQGLGDYVRKNRFPGVVLGMSGGID CCEEEEECCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH SAITAAIAADALGPDKVWCVMMPSKYTSNDSLEDAKACAQALGCRYDTINIHPGVEALDT HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHH MLGDVFAGKKADITEENIQSRLRAVTLMALSNKFGQMVVTTGNKSEMAVGYATLYGDMCG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHCC GYNALKDFYKTEVFELSKWRNAVHPKDALAPAGEVIPERIITKPPSAELREDQKDEDSLP CHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCC PYEVLDDILRGLVDLEEDVDDILARGHDAATVRRIEHLVYIAEYKRRQAPPGVKVGGKNF CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC GRDRRYPITNRFRDD CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8431308; 8195100 [H]