| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is pyrE
Identifier: 114797568
GI number: 114797568
Start: 896003
End: 896584
Strand: Direct
Name: pyrE
Synonym: HNE_0874
Alternate gene names: 114797568
Gene position: 896003-896584 (Clockwise)
Preceding gene: 114798559
Following gene: 114799252
Centisome position: 24.18
GC content: 63.23
Gene sequence:
>582_bases ATGACCAGTGAAGACGTGCTCGCCGTGTTCAAAGAGGCGGGCGCATTGCTGGAGGGGCATTTCATCCTCTCCTCCGGGCG TCGCAGCTCCGTTTTTTTGCAGAAGGCGCTTGTCTTCTCGCGGCCGGACCTTTCAGAGAAACTCTGCAAGGCGCTCGCTG CCAGGCTGGCGGCAGACTTCGGCAAGATCGATGTGGTCGCCGGCCCCGCCGTGGGCGGCATCATTCCCGGTTATGAGCTT GCCCGCCATCTGGGCGCACGCGCCATTTTTGCCGAGCGCGTCGATGGCCAGCTCCAGTTCCGCCGCGGCTTTTCGATTGC GGCGGGCGAGCGGGTGCTGATCGCCGAAGACATTGTCACGACCGGTCTTTCTTTCCGCGAAACGGTCGAGGCGCTTGCAA AGCTGCCCGGTGAGGTCGTCGGCGGCGCCTGTATCATTGACCGTTCCGGCGGCCGCGCCGATGTCGGCTGCAAGCTGATC TCGCTCGCCCAGGTAAACTTTCCCGATTATGCGCCTGATGATCTGCCTCCGGAGCTTCAGAAGATCGAAGCCATCAAGCC CGGCTCGCGGGGGCTTGCCTGA
Upstream 100 bases:
>100_bases GATATTGAGGTTGAAGACCTGAAGCGTATGACGCAAATCCTTGCGGCACTGCGGTCCTTGGCCGTGGTAGACCGGGCCAT ACGCGATCAGGAGGGACAAT
Downstream 100 bases:
>100_bases TGACCAGCCGTCTCCGCCTCGGGGTCAATATTGATCATGTGGCGACCATCCGCAACGCGCGCGGAGGCGCCCATCCTGAT CCGATGCGCGCCGCTGAAAT
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTSEDVLAVFKEAGALLEGHFILSSGRRSSVFLQKALVFSRPDLSEKLCKALAARLAADFGKIDVVAGPAVGGIIPGYEL ARHLGARAIFAERVDGQLQFRRGFSIAAGERVLIAEDIVTTGLSFRETVEALAKLPGEVVGGACIIDRSGGRADVGCKLI SLAQVNFPDYAPDDLPPELQKIEAIKPGSRGLA
Sequences:
>Translated_193_residues MTSEDVLAVFKEAGALLEGHFILSSGRRSSVFLQKALVFSRPDLSEKLCKALAARLAADFGKIDVVAGPAVGGIIPGYEL ARHLGARAIFAERVDGQLQFRRGFSIAAGERVLIAEDIVTTGLSFRETVEALAKLPGEVVGGACIIDRSGGRADVGCKLI SLAQVNFPDYAPDDLPPELQKIEAIKPGSRGLA >Mature_192_residues TSEDVLAVFKEAGALLEGHFILSSGRRSSVFLQKALVFSRPDLSEKLCKALAARLAADFGKIDVVAGPAVGGIIPGYELA RHLGARAIFAERVDGQLQFRRGFSIAAGERVLIAEDIVTTGLSFRETVEALAKLPGEVVGGACIIDRSGGRADVGCKLIS LAQVNFPDYAPDDLPPELQKIEAIKPGSRGLA
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PYRE_HYPNA (Q0C3U2)
Other databases:
- EMBL: CP000158 - RefSeq: YP_759601.1 - ProteinModelPortal: Q0C3U2 - SMR: Q0C3U2 - STRING: Q0C3U2 - GeneID: 4287286 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_0874 - NMPDR: fig|228405.5.peg.854 - TIGR: HNE_0874 - eggNOG: COG0461 - HOGENOM: HBG404341 - OMA: FYLQSAK - PhylomeDB: Q0C3U2 - ProtClustDB: CLSK2531682 - BioCyc: HNEP81032:HNE_0874-MONOMER - HAMAP: MF_01208 - InterPro: IPR023031 - InterPro: IPR006273 - InterPro: IPR000836 - TIGRFAMs: TIGR01367
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.10
Molecular weight: Translated: 20388; Mature: 20257
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: BINDING 120-120 BINDING 148-148
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEDVLAVFKEAGALLEGHFILSSGRRSSVFLQKALVFSRPDLSEKLCKALAARLAADF CCCHHHHHHHHHHCCHHCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC GKIDVVAGPAVGGIIPGYELARHLGARAIFAERVDGQLQFRRGFSIAAGERVLIAEDIVT CCEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHCCCEEEECCCCEECCCCEEEEEHHHHH TGLSFRETVEALAKLPGEVVGGACIIDRSGGRADVGCKLISLAQVNFPDYAPDDLPPELQ CCCCHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHH KIEAIKPGSRGLA HHHCCCCCCCCCC >Mature Secondary Structure TSEDVLAVFKEAGALLEGHFILSSGRRSSVFLQKALVFSRPDLSEKLCKALAARLAADF CCHHHHHHHHHHCCHHCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC GKIDVVAGPAVGGIIPGYELARHLGARAIFAERVDGQLQFRRGFSIAAGERVLIAEDIVT CCEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHCCCEEEECCCCEECCCCEEEEEHHHHH TGLSFRETVEALAKLPGEVVGGACIIDRSGGRADVGCKLISLAQVNFPDYAPDDLPPELQ CCCCHHHHHHHHHHCCHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHH KIEAIKPGSRGLA HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA