| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797226
Identifier: 114797226
GI number: 114797226
Start: 3515148
End: 3516875
Strand: Direct
Name: 114797226
Synonym: HNE_3371
Alternate gene names: NA
Gene position: 3515148-3516875 (Clockwise)
Preceding gene: 114797584
Following gene: 114797222
Centisome position: 94.88
GC content: 67.48
Gene sequence:
>1728_bases TTGGCCGAGAGCGAGTCTGATTTCAACGCCGACCGTACACGCACAAGCAGCGATGACGCCGCGCTTTGGCGCCGCTTCCG GGGCGTGGTTGGCGAGGACGCGAAAGTCTCCACGCTCCAGAAGCTGAAACTGACAGGCCACGGCCCGGACGGCTTCTCCC TCCACATTTCCAATCTTCTGCCCCCGGACGACCGGCGCGGCGACGCGCTGATGCGCGGCGTCTGGCGTATCGGCCAGCAG CGCATGGAGATGGCACCGGGCGACGCGCCGTGGAGCCTGGAAATGCCCTCCCGCCACTTCGCAGACCGGGTACATCGGTT TGGCTGGCTACCCGATCTGATGGCACAGGGCGAAGACGGCATCGCCCTTGCCCGCGCCCTGACCGATGACTGGATCATCC GCTTTGGCAAATTTAACGGCTTTGCCTGGCGTATCGAGCCGACCGCGAGCCGCGTGTGGAACTGGATGCGCTGTGGCCCC GGCCTGTTTGAAATGGGCACGCCGGAAGAACGCAGTGAACGGATTGATGCCCTCTCCCGGCAGCTACGATATCTGGCCGA GGTGATCGACAGCGCGCATGATCCCAAATCCCGCTGGATGGGCGCTGTGGCGCTTGTCGCCCATTCCCTCTGTCTGCGGA AGGGCGCGGGCCTCAGCGAAGCGCTCGCGCGCCTTGAAGGCGAGGTTACCGCGCAGATCCTGCCCGATGGCGGCCACGTT ACCCGCAGCCCGGCGCATACCCTCTCTTCCCTGCTGCACCTGCAGACGGTCGAGGAAGCCCTGATCCGCGTCCAGCGCCC GGTGCCTGACTGGATCACCAAATGGGTGCCCCGCATGGGCGCCATGCTCGCCTTCTTCCGCAGTGGCGATGGTGCGCTCG ACACCTTCAATGACGGCGACGAGTCGCGCGCCGAACTGGTCGAGGCCGTCCTCTCGCGCCTCGAGACGCCCCCGCGCCGC TTCCTGTTCGCGCCCAAATCCGGCTTCCAGAAGATTGAGCGTGGCACCCTGCGCTTTGTGCTAGATTGCGGCGAGGCCCC GCCCCGTCCGTTTGCGGAGCATGCCCGCGCCGGCGCGCTTGGCTTTGAACTCTCCGATGGCCCGGCGCGCCTCGTCACCT CCTGCGGCTACTCCTCCGAGGTGAATGTCGACTGGCAGGCCGCCGTGCGCCGCACCAGCGCCCACTCCACCCTCGTGCTG GCCGGCCGCGACAGCTCTGCCTTCGTCTTCAATGACGAGACCCGCATGCGCGCCGTCACCGGCCCGGAAGGCATTGCCGC CAAGCGCCTGGAAGAGGCCAACGAGATATGGCTCGACGCCCAGCATGCCGGCTACAAGGCCGCCTATGGCCTGCTCCACC GCCGCCGCATCTTCGTCTCCGGCGCGGGCGACCGGCTCACCGGCGAGGACTCCCTCGTGCGCCCGGTCGCCCAGCCCATG AGCGACGACAAGAAGGGCATCCCCTTCGAGATCCGCTTCCACCTTCACCCCACCGTCACCGCCCATATGGGCCGCGAAGT CATCCGCCTCGTCAGCGAGACCGGCGCCATCTGGCGGTTCAAGACCAGCCACGAAGGCGCGCGCCTCGAACGCACCGCCT ATCTCGCCCGCGGCGTGGTGGACACGCCCGAACAGATCGTGCTGGCGGGCTTTGCCGACCCCAACGCCGATGGCAGCCAG CCGCCCAACTGTGTCCGCTGGGCGTTCATCCGCGAAACGCCCGCCTGA
Upstream 100 bases:
>100_bases TGCCGTCTTCAAGGGCGGGCCCGATGCCTATGCTGCCAACATCCGCGCCCTCCGGCCGCAAGTTAACGCCTGATCGCAGA GTTCGGGGATAGGTCCAGCC
Downstream 100 bases:
>100_bases GACGGCCTGATACGGTCCGGCATGTCTTGACGCCGCCTCAGGGGGTGCTAGGCCGCGCGCAGCTTTCCCAACGCCTTTGA AGGAGCAGCCCATATGTCCG
Product: heparinase II/III-like family protein
Products: NA
Alternate protein names: Heparinase II/III-Like; Heparinase II/III-Like Protein; Heparinase II/III-Like Family Protein; Cytoplasmic Protein; Heparinase II/Iii Family Protein
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MAESESDFNADRTRTSSDDAALWRRFRGVVGEDAKVSTLQKLKLTGHGPDGFSLHISNLLPPDDRRGDALMRGVWRIGQQ RMEMAPGDAPWSLEMPSRHFADRVHRFGWLPDLMAQGEDGIALARALTDDWIIRFGKFNGFAWRIEPTASRVWNWMRCGP GLFEMGTPEERSERIDALSRQLRYLAEVIDSAHDPKSRWMGAVALVAHSLCLRKGAGLSEALARLEGEVTAQILPDGGHV TRSPAHTLSSLLHLQTVEEALIRVQRPVPDWITKWVPRMGAMLAFFRSGDGALDTFNDGDESRAELVEAVLSRLETPPRR FLFAPKSGFQKIERGTLRFVLDCGEAPPRPFAEHARAGALGFELSDGPARLVTSCGYSSEVNVDWQAAVRRTSAHSTLVL AGRDSSAFVFNDETRMRAVTGPEGIAAKRLEEANEIWLDAQHAGYKAAYGLLHRRRIFVSGAGDRLTGEDSLVRPVAQPM SDDKKGIPFEIRFHLHPTVTAHMGREVIRLVSETGAIWRFKTSHEGARLERTAYLARGVVDTPEQIVLAGFADPNADGSQ PPNCVRWAFIRETPA
Sequences:
>Translated_575_residues MAESESDFNADRTRTSSDDAALWRRFRGVVGEDAKVSTLQKLKLTGHGPDGFSLHISNLLPPDDRRGDALMRGVWRIGQQ RMEMAPGDAPWSLEMPSRHFADRVHRFGWLPDLMAQGEDGIALARALTDDWIIRFGKFNGFAWRIEPTASRVWNWMRCGP GLFEMGTPEERSERIDALSRQLRYLAEVIDSAHDPKSRWMGAVALVAHSLCLRKGAGLSEALARLEGEVTAQILPDGGHV TRSPAHTLSSLLHLQTVEEALIRVQRPVPDWITKWVPRMGAMLAFFRSGDGALDTFNDGDESRAELVEAVLSRLETPPRR FLFAPKSGFQKIERGTLRFVLDCGEAPPRPFAEHARAGALGFELSDGPARLVTSCGYSSEVNVDWQAAVRRTSAHSTLVL AGRDSSAFVFNDETRMRAVTGPEGIAAKRLEEANEIWLDAQHAGYKAAYGLLHRRRIFVSGAGDRLTGEDSLVRPVAQPM SDDKKGIPFEIRFHLHPTVTAHMGREVIRLVSETGAIWRFKTSHEGARLERTAYLARGVVDTPEQIVLAGFADPNADGSQ PPNCVRWAFIRETPA >Mature_574_residues AESESDFNADRTRTSSDDAALWRRFRGVVGEDAKVSTLQKLKLTGHGPDGFSLHISNLLPPDDRRGDALMRGVWRIGQQR MEMAPGDAPWSLEMPSRHFADRVHRFGWLPDLMAQGEDGIALARALTDDWIIRFGKFNGFAWRIEPTASRVWNWMRCGPG LFEMGTPEERSERIDALSRQLRYLAEVIDSAHDPKSRWMGAVALVAHSLCLRKGAGLSEALARLEGEVTAQILPDGGHVT RSPAHTLSSLLHLQTVEEALIRVQRPVPDWITKWVPRMGAMLAFFRSGDGALDTFNDGDESRAELVEAVLSRLETPPRRF LFAPKSGFQKIERGTLRFVLDCGEAPPRPFAEHARAGALGFELSDGPARLVTSCGYSSEVNVDWQAAVRRTSAHSTLVLA GRDSSAFVFNDETRMRAVTGPEGIAAKRLEEANEIWLDAQHAGYKAAYGLLHRRRIFVSGAGDRLTGEDSLVRPVAQPMS DDKKGIPFEIRFHLHPTVTAHMGREVIRLVSETGAIWRFKTSHEGARLERTAYLARGVVDTPEQIVLAGFADPNADGSQP PNCVRWAFIRETPA
Specific function: Unknown
COG id: COG5360
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63822; Mature: 63691
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESESDFNADRTRTSSDDAALWRRFRGVVGEDAKVSTLQKLKLTGHGPDGFSLHISNLL CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCEEEECCCC PPDDRRGDALMRGVWRIGQQRMEMAPGDAPWSLEMPSRHFADRVHRFGWLPDLMAQGEDG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHCCCCC IALARALTDDWIIRFGKFNGFAWRIEPTASRVWNWMRCGPGLFEMGTPEERSERIDALSR HHHHHHHHHHHHEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH QLRYLAEVIDSAHDPKSRWMGAVALVAHSLCLRKGAGLSEALARLEGEVTAQILPDGGHV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCC TRSPAHTLSSLLHLQTVEEALIRVQRPVPDWITKWVPRMGAMLAFFRSGDGALDTFNDGD CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ESRAELVEAVLSRLETPPRRFLFAPKSGFQKIERGTLRFVLDCGEAPPRPFAEHARAGAL HHHHHHHHHHHHHHCCCCHHEEECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCC GFELSDGPARLVTSCGYSSEVNVDWQAAVRRTSAHSTLVLAGRDSSAFVFNDETRMRAVT CEEECCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCEEEECCCCCEEEEC GPEGIAAKRLEEANEIWLDAQHAGYKAAYGLLHRRRIFVSGAGDRLTGEDSLVRPVAQPM CCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCC SDDKKGIPFEIRFHLHPTVTAHMGREVIRLVSETGAIWRFKTSHEGARLERTAYLARGVV CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCC DTPEQIVLAGFADPNADGSQPPNCVRWAFIRETPA CCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure AESESDFNADRTRTSSDDAALWRRFRGVVGEDAKVSTLQKLKLTGHGPDGFSLHISNLL CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCEEEECCCC PPDDRRGDALMRGVWRIGQQRMEMAPGDAPWSLEMPSRHFADRVHRFGWLPDLMAQGEDG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHCCCCC IALARALTDDWIIRFGKFNGFAWRIEPTASRVWNWMRCGPGLFEMGTPEERSERIDALSR HHHHHHHHHHHHEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH QLRYLAEVIDSAHDPKSRWMGAVALVAHSLCLRKGAGLSEALARLEGEVTAQILPDGGHV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCC TRSPAHTLSSLLHLQTVEEALIRVQRPVPDWITKWVPRMGAMLAFFRSGDGALDTFNDGD CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ESRAELVEAVLSRLETPPRRFLFAPKSGFQKIERGTLRFVLDCGEAPPRPFAEHARAGAL HHHHHHHHHHHHHHCCCCHHEEECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCC GFELSDGPARLVTSCGYSSEVNVDWQAAVRRTSAHSTLVLAGRDSSAFVFNDETRMRAVT CEEECCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCEEEECCCCCEEEEC GPEGIAAKRLEEANEIWLDAQHAGYKAAYGLLHRRRIFVSGAGDRLTGEDSLVRPVAQPM CCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCC SDDKKGIPFEIRFHLHPTVTAHMGREVIRLVSETGAIWRFKTSHEGARLERTAYLARGVV CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCC DTPEQIVLAGFADPNADGSQPPNCVRWAFIRETPA CCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA