| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797220
Identifier: 114797220
GI number: 114797220
Start: 273437
End: 275680
Strand: Reverse
Name: 114797220
Synonym: HNE_0285
Alternate gene names: NA
Gene position: 275680-273437 (Counterclockwise)
Preceding gene: 114799924
Following gene: 114798348
Centisome position: 7.44
GC content: 51.96
Gene sequence:
>2244_bases GTGCTACTTAAGGTCAATAGGATAAGAAACCTCGGGGTATTCTCAGACTTCTCTTGGGATGCCGGGCTACCCGCGTTCGA GCGCTTCAATGTGGTGTATGGAGAGAACGGGACCGGCAAGACAACGCTCTCCCGACTGTTCGACTGTCTCAAGACAGGGC TGCATGAAGATTACCCTGCTTTAGAATTCAAGATATCCTCGGAGACAGGCGATTTCACGCATGGTGCCGCGGCCGCAAGG AAGGTGCGCGTATTTAATGCCGACTACGTGCAGCTGAACATTGGCCAGCTCGACGGAAATTTGAAACCAATCCTTGTAGT TGGAGAGGAGAACAAAGCGCTCAGCGAAGCACTGAAACAGAATGAGCGGGAGCTTGCGACACGGAAAGACCTGATCGCCG AAGCTGAGTCGCGCATAGCGCAACATGAGACAGCGCGAGGGAAACTGTTCACCTCAGTTGCAGCCACGATCAGCGAGGCG ACAAGCGGCACCCTCCAACGCAGCTACAGAAAGAACAACGCAGAAGCCGCTTTTAAGATCCTTGGCGTCAGTAAGGAGCC GACTGAAACGGAGCTTACTGCCCACCGTGCTACCTTACGTCAGGAAGCGATGGACAGGATCGAAGCCGAACTAACGAAAA CCATGATGTTTAGCGGGAACGATCACTCTTTCGATCAGGCTGCCAGGGCGATCGAATCGGCCGCCTCATCATTGTGCGGA AGAACCGTCATCAGCGACGCCATAGCGCGCCTGCAAGATTCCCCTGAGATCGCGAAGTGGGTCGAACAGGGCCATGCGCT TCACAAAGCGCTCGGAAGCCAAACCTGCCAGTTCTGCGAGCAGGATCTACCTGCGGACCGCTGGCGGAAGCTCGAAGCCC ACTTCAATAACGAGGATCAGGCGCTGAAGTCAGAAATAGAGCGCACCATTGACGAAATTGATCAATTGAAAAAGTTCTTA CAATCCACATCGCTGCCGGACAAATTCGCACTTTATGGTGACTTCAGACACCAGTATGACGAGGCCAAGGAAACTCTGAC TACTGAAGTTATGGCGGCCAGCGCCGCGCTTGACCAGATCACAGCCAAGCTGGCCGAGAAGCTCGGCGCGCGAACTGCTT CAATTCCGTTCGACATTCGACTGGACTTTGGCGGACTTGCCAATGCCTTTTCTGCCGTTTCAGCGCTGCTGGATAATCAC AACAAAAAGACCGAGCTGTTCACGGGCGCGAAGGACGCCGCGAAGAAGGCCATCGAAGCCTATTACCTCATCGGGATAAA GGCGCAAGTAGCCATATTCGATGCGAAGATTGTTGATGAAATGGCACTCATTACACAGAATAAAGATGGAGATGAGGGCG CCGGTATGGCCGCACTTGCCACGCTTGAAGCTGCAATAAACGAAAAGAAGATGCAAATCTCGAGTGCCCACAAGGCAGGG GAAGACCTCACCAAGCTTCTGCAGACCTTCCTCGGGCGAAATGAACTTACCTTCGAGTCCAGTGACCTCGGCTACCGCGT GAAAAGAAATGGTAAAGACGCCAAGCGCCTCAGTGAGGGCGAGAGAACCGCCATTGCGTTCATCTATTTCATCGTTCAGC TGAAGGATCAGGACTTCGATTTGGCCGAGGGTGTCGTTGTCATTGATGACCCAGTTTCCAGCCTCGACTCTAGTTCAGTT TATCAGGCCTTCGCGTTTCTAAAAAGCGCCGTGCGAGACGCAAAGCAGGTATTCCTGCTGACCCACAATTTTTCGTTTCT TCGGCTGGTCATCAATTGGTTGCAGCACGATCCTGCGGCAAAGAAAAAGAACAAGATGTACATGCTAGTTTGCCGAAATG GCGCTACTGGACGCCATTCTACAATGGGCCCTCTTGATCAGGCCCTGATCGATCACCCAACCGAATATCACTTCCTCTTC AAGACACTCACTAACTTTAATGGTGATGGCACTATTGCTGATTGTTATCACATCCCCAATGTTACACGCAAAGTATTGGA GACGTTCCTCGACTTTTTTGCTCCGGGGAAGAACTCTCTTTACTCGAAACTTTCTCAGGTCGACTTCGATGAAAACAAGA AGACGGCCATTTACAAATACGCGAATGACAACTCTCACTTCACTGGCCAGGGCTTCGAGCCGGGACTCGTTCAGGAGAGT CAGAAGAACGTCACTTACCTTTTGGAAATGATCAAAACGCTTGCTCCTCAGCACTATGCAGGAATGGTCGCGGCAACCTC ATGA
Upstream 100 bases:
>100_bases GCGGCTCATCTCGACTGCCGACTTACTTGCAATCGCGGATGATTGGCGCAGAAGGTTGGGACCGATTTGTCAGTGTGGGG CGATTGCCCGGGAGGGGGTA
Downstream 100 bases:
>100_bases AAGCAATCATCTCGCCTCCCCCGTGCCGGGCATTTCTATGACCTACAATTTCATAAATCTGGCATGGGCCGATTTCGAGG ATCTTGCGCGAGACCTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPALEFKISSETGDFTHGAAAAR KVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQNERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEA TSGTLQRSYRKNNAEAAFKILGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQALKSEIERTIDEIDQLKKFL QSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQITAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNH NKKTELFTGAKDAAKKAIEAYYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFDLAEGVVVIDDPVSSLDSSSV YQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAAKKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLF KTLTNFNGDGTIADCYHIPNVTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES QKNVTYLLEMIKTLAPQHYAGMVAATS
Sequences:
>Translated_747_residues MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPALEFKISSETGDFTHGAAAAR KVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQNERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEA TSGTLQRSYRKNNAEAAFKILGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQALKSEIERTIDEIDQLKKFL QSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQITAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNH NKKTELFTGAKDAAKKAIEAYYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFDLAEGVVVIDDPVSSLDSSSV YQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAAKKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLF KTLTNFNGDGTIADCYHIPNVTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES QKNVTYLLEMIKTLAPQHYAGMVAATS >Mature_747_residues MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPALEFKISSETGDFTHGAAAAR KVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQNERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEA TSGTLQRSYRKNNAEAAFKILGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQALKSEIERTIDEIDQLKKFL QSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQITAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNH NKKTELFTGAKDAAKKAIEAYYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFDLAEGVVVIDDPVSSLDSSSV YQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAAKKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLF KTLTNFNGDGTIADCYHIPNVTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES QKNVTYLLEMIKTLAPQHYAGMVAATS
Specific function: Unknown
COG id: COG4694
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82857; Mature: 82857
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPA CEEEECCCCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC LEFKISSETGDFTHGAAAARKVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQ EEEEECCCCCCCCHHHHHHHEEEEEECCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH NERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEATSGTLQRSYRKNNAEAAFKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEE LGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH ALKSEIERTIDEIDQLKKFLQSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNHNKKTELFTGAKDAAKKAIEA HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHH YYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG HHEEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFD HHHHHHHHHHHCCCCEEEECCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCC LAEGVVVIDDPVSSLDSSSVYQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAA HHCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCCC KKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLFKTLTNFNGDGTIADCYHIPN CCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEHHHHCCH VTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH QKNVTYLLEMIKTLAPQHYAGMVAATS HHHHHHHHHHHHHHCCHHHHCEEEECC >Mature Secondary Structure MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPA CEEEECCCCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC LEFKISSETGDFTHGAAAARKVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQ EEEEECCCCCCCCHHHHHHHEEEEEECCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH NERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEATSGTLQRSYRKNNAEAAFKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEE LGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH ALKSEIERTIDEIDQLKKFLQSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNHNKKTELFTGAKDAAKKAIEA HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHH YYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG HHEEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFD HHHHHHHHHHHCCCCEEEECCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCC LAEGVVVIDDPVSSLDSSSVYQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAA HHCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCCC KKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLFKTLTNFNGDGTIADCYHIPN CCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEHHHHCCH VTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH QKNVTYLLEMIKTLAPQHYAGMVAATS HHHHHHHHHHHHHHCCHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA