Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yqaE [H]

Identifier: 114797180

GI number: 114797180

Start: 64086

End: 64286

Strand: Direct

Name: yqaE [H]

Synonym: HNE_0079

Alternate gene names: 114797180

Gene position: 64086-64286 (Clockwise)

Preceding gene: 114799436

Following gene: 114800012

Centisome position: 1.73

GC content: 56.22

Gene sequence:

>201_bases
ATGCCCACAGAAAACACGAAAGGTACCTTCATGTCGTTCCTCATGATCCTGCTTACGATCTTCCTGCCGCCCGTCGCCGT
CCTTCTGAAAGAAGGCCTTGGCCTGCAATTCCTGCTGAACGTCATTCTGACGCTGATCGGCTGGTTGCCCGGCGTGATCC
ACGCTTTCTGGGTCAATACACGCGGCTCGGCGGTCGCTTAA

Upstream 100 bases:

>100_bases
CTCATTGGAAGCTCCCTTTTGTGGCGCAAGGATTAGTGCCCGTGCTGCAGCGCGTCAAACAGTTGGCGTGTGACGGAACG
CTCACCGGCTTTGTGCGTTT

Downstream 100 bases:

>100_bases
CGCGTCAGCGCCGGCCTTTGGAGGCGGTCGCCATTGGGTGGGCCGTTTCCAGAAGCTCGGCCAGTTCATCGGTCAGGACG
TGGGTGTAAATCTGCGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MPTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNTRGSAVA

Sequences:

>Translated_66_residues
MPTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNTRGSAVA
>Mature_65_residues
PTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNTRGSAVA

Specific function: Unknown

COG id: COG0401

COG function: function code S; Uncharacterized homolog of Blt101

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0057 (PMP3) family [H]

Homologues:

Organism=Escherichia coli, GI1789020, Length=51, Percent_Identity=56.8627450980392, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000612 [H]

Pfam domain/function: PF01679 UPF0057 [H]

EC number: NA

Molecular weight: Translated: 7226; Mature: 7095

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS01309 UPF0057

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RGSAVA
CCCCCC
>Mature Secondary Structure 
PTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RGSAVA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]