| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yqaE [H]
Identifier: 114797180
GI number: 114797180
Start: 64086
End: 64286
Strand: Direct
Name: yqaE [H]
Synonym: HNE_0079
Alternate gene names: 114797180
Gene position: 64086-64286 (Clockwise)
Preceding gene: 114799436
Following gene: 114800012
Centisome position: 1.73
GC content: 56.22
Gene sequence:
>201_bases ATGCCCACAGAAAACACGAAAGGTACCTTCATGTCGTTCCTCATGATCCTGCTTACGATCTTCCTGCCGCCCGTCGCCGT CCTTCTGAAAGAAGGCCTTGGCCTGCAATTCCTGCTGAACGTCATTCTGACGCTGATCGGCTGGTTGCCCGGCGTGATCC ACGCTTTCTGGGTCAATACACGCGGCTCGGCGGTCGCTTAA
Upstream 100 bases:
>100_bases CTCATTGGAAGCTCCCTTTTGTGGCGCAAGGATTAGTGCCCGTGCTGCAGCGCGTCAAACAGTTGGCGTGTGACGGAACG CTCACCGGCTTTGTGCGTTT
Downstream 100 bases:
>100_bases CGCGTCAGCGCCGGCCTTTGGAGGCGGTCGCCATTGGGTGGGCCGTTTCCAGAAGCTCGGCCAGTTCATCGGTCAGGACG TGGGTGTAAATCTGCGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MPTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNTRGSAVA
Sequences:
>Translated_66_residues MPTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNTRGSAVA >Mature_65_residues PTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNTRGSAVA
Specific function: Unknown
COG id: COG0401
COG function: function code S; Uncharacterized homolog of Blt101
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0057 (PMP3) family [H]
Homologues:
Organism=Escherichia coli, GI1789020, Length=51, Percent_Identity=56.8627450980392, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000612 [H]
Pfam domain/function: PF01679 UPF0057 [H]
EC number: NA
Molecular weight: Translated: 7226; Mature: 7095
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS01309 UPF0057
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RGSAVA CCCCCC >Mature Secondary Structure PTENTKGTFMSFLMILLTIFLPPVAVLLKEGLGLQFLLNVILTLIGWLPGVIHAFWVNT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RGSAVA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]