| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797116
Identifier: 114797116
GI number: 114797116
Start: 1992958
End: 1993872
Strand: Reverse
Name: 114797116
Synonym: HNE_1923
Alternate gene names: NA
Gene position: 1993872-1992958 (Counterclockwise)
Preceding gene: 114798600
Following gene: 114799676
Centisome position: 53.82
GC content: 60.55
Gene sequence:
>915_bases ATGAGTTATGATGTCTTTCTGGTTTCTGCTGTAGCAGACCGGGACATTGCCAAGCTGGTGGTGCGCCGGTTGCGGTCGCT GAAATTCCGCGTGGCGTTCAATCAGAGCCAGGTCGATGAGACTTTCGACCCCAAAGATGCCCGAGATGCCACCAATTCAC AGTCCGTTCTGGTCTTGTGGTCTGAAAATGCTGTGAAAAGTGATTGGGTGCGGGCCGCTGCGTCGGTTGGCAATTCCCGT CCCGGCACACTGATTCAGGCGGCGATCGATAAAACGATCCCCTATGAGCCCTTCCGGCAGGAGAAGCGCTACTCGATCGA GGGCATGACTTCGCGCAAGACGCCGGATGGATTTTTCCAGTTAATTGAAGAACTTGGCCGCCGGGATGGCCGCGCTGACC TGCGCGCCTGGATGAATTTCGGGTCCAAGGATGATGACAAGCGGGCAGACTGGGTTGCGGCCCACCCGAATGACCCGATC TCTGTGGATGCGCGCAAAAAACGTGAGAAAGATCTAGGTATTAAGCCGGCACCTGCCCGCGACGCCATCGGCGCTGCGGC ACTGGCGGCGGCCTCGCTCAAGACGAATGGCACCAAGAGCCCTGCGCCTCAGTCCATGGCTATTCCCGTGGCGACAGCCC AGCCCAATCCGCTCGTTGAGCTGGGGGCAGGCTGGGGCGCGATTGCGGCTGTCTCTGCAGCGATTGTGGGGATGCTGGTG ATGGCCTGGGTGTTCCGGTCTGATGCGTCGCCCGAGATGGCGGCGTCGGCCCATTCCATTGCCAATGCGCGGGTGGCGAC GGTGACTTGCCCGGCCGGGACAGTGCCGAGATCGCTTCTGCATGTGTTGGAAACCGGGCCGATCGTGGACGATACCCAGC CCCAGATCATCGACGACACAAGCCCGCCAGAGTGA
Upstream 100 bases:
>100_bases CAGCTGAAAAACAGGCACAAAAATCGCTAGGATGCAGCGGGACTGGCGTTCAGGCGTTGTGTAGTATCGTCAGGATGAGC CGTATGCGAGGTAGAGTGCG
Downstream 100 bases:
>100_bases GCCAAATCCGGGTCACGGGGCGGACAAATCGGGACAAACTTGGACAAACCAGGACAAAATGGGACACTTCAGGACAGAAA AAAAAGCCGCCCGGAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSYDVFLVSAVADRDIAKLVVRRLRSLKFRVAFNQSQVDETFDPKDARDATNSQSVLVLWSENAVKSDWVRAAASVGNSR PGTLIQAAIDKTIPYEPFRQEKRYSIEGMTSRKTPDGFFQLIEELGRRDGRADLRAWMNFGSKDDDKRADWVAAHPNDPI SVDARKKREKDLGIKPAPARDAIGAAALAAASLKTNGTKSPAPQSMAIPVATAQPNPLVELGAGWGAIAAVSAAIVGMLV MAWVFRSDASPEMAASAHSIANARVATVTCPAGTVPRSLLHVLETGPIVDDTQPQIIDDTSPPE
Sequences:
>Translated_304_residues MSYDVFLVSAVADRDIAKLVVRRLRSLKFRVAFNQSQVDETFDPKDARDATNSQSVLVLWSENAVKSDWVRAAASVGNSR PGTLIQAAIDKTIPYEPFRQEKRYSIEGMTSRKTPDGFFQLIEELGRRDGRADLRAWMNFGSKDDDKRADWVAAHPNDPI SVDARKKREKDLGIKPAPARDAIGAAALAAASLKTNGTKSPAPQSMAIPVATAQPNPLVELGAGWGAIAAVSAAIVGMLV MAWVFRSDASPEMAASAHSIANARVATVTCPAGTVPRSLLHVLETGPIVDDTQPQIIDDTSPPE >Mature_303_residues SYDVFLVSAVADRDIAKLVVRRLRSLKFRVAFNQSQVDETFDPKDARDATNSQSVLVLWSENAVKSDWVRAAASVGNSRP GTLIQAAIDKTIPYEPFRQEKRYSIEGMTSRKTPDGFFQLIEELGRRDGRADLRAWMNFGSKDDDKRADWVAAHPNDPIS VDARKKREKDLGIKPAPARDAIGAAALAAASLKTNGTKSPAPQSMAIPVATAQPNPLVELGAGWGAIAAVSAAIVGMLVM AWVFRSDASPEMAASAHSIANARVATVTCPAGTVPRSLLHVLETGPIVDDTQPQIIDDTSPPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32743; Mature: 32612
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYDVFLVSAVADRDIAKLVVRRLRSLKFRVAFNQSQVDETFDPKDARDATNSQSVLVLW CCCEEEEEEHHHCCHHHHHHHHHHHHCEEEEEECHHHCCCCCCCCCHHCCCCCCEEEEEE SENAVKSDWVRAAASVGNSRPGTLIQAAIDKTIPYEPFRQEKRYSIEGMTSRKTPDGFFQ CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHH LIEELGRRDGRADLRAWMNFGSKDDDKRADWVAAHPNDPISVDARKKREKDLGIKPAPAR HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCH DAIGAAALAAASLKTNGTKSPAPQSMAIPVATAQPNPLVELGAGWGAIAAVSAAIVGMLV HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHH MAWVFRSDASPEMAASAHSIANARVATVTCPAGTVPRSLLHVLETGPIVDDTQPQIIDDT HHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEECCC SPPE CCCC >Mature Secondary Structure SYDVFLVSAVADRDIAKLVVRRLRSLKFRVAFNQSQVDETFDPKDARDATNSQSVLVLW CCEEEEEEHHHCCHHHHHHHHHHHHCEEEEEECHHHCCCCCCCCCHHCCCCCCEEEEEE SENAVKSDWVRAAASVGNSRPGTLIQAAIDKTIPYEPFRQEKRYSIEGMTSRKTPDGFFQ CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHH LIEELGRRDGRADLRAWMNFGSKDDDKRADWVAAHPNDPISVDARKKREKDLGIKPAPAR HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCH DAIGAAALAAASLKTNGTKSPAPQSMAIPVATAQPNPLVELGAGWGAIAAVSAAIVGMLV HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHH MAWVFRSDASPEMAASAHSIANARVATVTCPAGTVPRSLLHVLETGPIVDDTQPQIIDDT HHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEECCC SPPE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA