| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800554
Identifier: 114800554
GI number: 114800554
Start: 2549390
End: 2550313
Strand: Reverse
Name: 114800554
Synonym: HNE_2437
Alternate gene names: NA
Gene position: 2550313-2549390 (Counterclockwise)
Preceding gene: 114798900
Following gene: 114797070
Centisome position: 68.83
GC content: 63.64
Gene sequence:
>924_bases ATGACAGCGGATCAGGCGGCAGCCAAGGAAGAGGAACGAGACCCACGCGGCCTCTCGCCCCTGATGATGCAGCCGCAACG CCTGCGCGGCCAGTTGATTGCCCGCCTTCAGCAGCAGGACATCACCGGCATCACGCCGCCTGACGTGCCCACAATCGTGT CAGCCCTGCTGCCCCAGCCCGTGCCGCTGCCCGCCAGTGCCTGGGAATCGGCGTCAGACCCGGCTGCGCAAGGCTGGTTC AGCGCGGCGCTTCCCGCCCTCCAGAAAGCCTGTCTCGGTCTGGACCTTGCGCAGATCACCAGCGACGGCGCCGTGCAGGA GCGTTTCCCGCTCCGGCTCTTCTCGCCCACGGCGTGGTTGCTGCGTCTGCGCTATCCGCTCGGCCCCGCCATTCGCACGG CGGAATTCATCGTCGATCTGGAAGCGCCGGATGGGGTGCAGGTTGTCCCCCTGTGCGGACGCTCCCAAGAGTTTCATGAC CGGCTGGCAGCCTACAAGGTTGGCTCTTGCGGGGATGCGGACTGTGTCGCCGATTTCACCCGCATTTTCTGCACCGTCCT TCAGGGGGAGGAGGGCATGTTCATGCCGTGTGAAAGCCGGGATGAACTCCTGTCGCGCTTTCTCGGCACGCCCGATGGAA AGCTGTTGGATGCGATCACGCCCTGGGTGCGCCTCACGCCGCCATCCGGTGTTTCGCTGCCGGCGATTGAGGTCCACATT TTTCACGGGCCAATGCTCTACGGTCAGAATGCGTATCTCGCGTCCCTCATCCTCACCTTGCCCCGGCATGGCGCTCCGGA AAATGTCAATGTCGGCATCTGGATGTTCGATGATGAAGGTCTTTGGCCAGACAAGCTGCCGATCGTTCCTGCACGCCGCG ACGCGCTGACATTTGCATTTTATCCGCTGCGGAGCGGCCAATGA
Upstream 100 bases:
>100_bases CAGTATTTCTTCCGCTGAAGATCAAATTTTCTCTTGGAGAATGAGGGCTGAGCGTATTGTCTTGCCTCGTATGTAAGCGC GGTGCAGGCAGGAGGGGGCG
Downstream 100 bases:
>100_bases AAACCACGACCATTTCAGCAGCAGATTTTATCGGCCGCATACTCTCAGGCGGCGGCTTCCATGTGGGCGAGCGCTATGTC GTCACCGGCGAGGTCAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTADQAAAKEEERDPRGLSPLMMQPQRLRGQLIARLQQQDITGITPPDVPTIVSALLPQPVPLPASAWESASDPAAQGWF SAALPALQKACLGLDLAQITSDGAVQERFPLRLFSPTAWLLRLRYPLGPAIRTAEFIVDLEAPDGVQVVPLCGRSQEFHD RLAAYKVGSCGDADCVADFTRIFCTVLQGEEGMFMPCESRDELLSRFLGTPDGKLLDAITPWVRLTPPSGVSLPAIEVHI FHGPMLYGQNAYLASLILTLPRHGAPENVNVGIWMFDDEGLWPDKLPIVPARRDALTFAFYPLRSGQ
Sequences:
>Translated_307_residues MTADQAAAKEEERDPRGLSPLMMQPQRLRGQLIARLQQQDITGITPPDVPTIVSALLPQPVPLPASAWESASDPAAQGWF SAALPALQKACLGLDLAQITSDGAVQERFPLRLFSPTAWLLRLRYPLGPAIRTAEFIVDLEAPDGVQVVPLCGRSQEFHD RLAAYKVGSCGDADCVADFTRIFCTVLQGEEGMFMPCESRDELLSRFLGTPDGKLLDAITPWVRLTPPSGVSLPAIEVHI FHGPMLYGQNAYLASLILTLPRHGAPENVNVGIWMFDDEGLWPDKLPIVPARRDALTFAFYPLRSGQ >Mature_306_residues TADQAAAKEEERDPRGLSPLMMQPQRLRGQLIARLQQQDITGITPPDVPTIVSALLPQPVPLPASAWESASDPAAQGWFS AALPALQKACLGLDLAQITSDGAVQERFPLRLFSPTAWLLRLRYPLGPAIRTAEFIVDLEAPDGVQVVPLCGRSQEFHDR LAAYKVGSCGDADCVADFTRIFCTVLQGEEGMFMPCESRDELLSRFLGTPDGKLLDAITPWVRLTPPSGVSLPAIEVHIF HGPMLYGQNAYLASLILTLPRHGAPENVNVGIWMFDDEGLWPDKLPIVPARRDALTFAFYPLRSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33577; Mature: 33446
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADQAAAKEEERDPRGLSPLMMQPQRLRGQLIARLQQQDITGITPPDVPTIVSALLPQP CCCCHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC VPLPASAWESASDPAAQGWFSAALPALQKACLGLDLAQITSDGAVQERFPLRLFSPTAWL CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHCCCEEEECCHHEE LRLRYPLGPAIRTAEFIVDLEAPDGVQVVPLCGRSQEFHDRLAAYKVGSCGDADCVADFT HEEECCCCCHHEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHEECCCCCCHHHHHHHH RIFCTVLQGEEGMFMPCESRDELLSRFLGTPDGKLLDAITPWVRLTPPSGVSLPAIEVHI HHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCEEEEEE FHGPMLYGQNAYLASLILTLPRHGAPENVNVGIWMFDDEGLWPDKLPIVPARRDALTFAF EECCEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEE YPLRSGQ EECCCCC >Mature Secondary Structure TADQAAAKEEERDPRGLSPLMMQPQRLRGQLIARLQQQDITGITPPDVPTIVSALLPQP CCCHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC VPLPASAWESASDPAAQGWFSAALPALQKACLGLDLAQITSDGAVQERFPLRLFSPTAWL CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHCCCEEEECCHHEE LRLRYPLGPAIRTAEFIVDLEAPDGVQVVPLCGRSQEFHDRLAAYKVGSCGDADCVADFT HEEECCCCCHHEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHEECCCCCCHHHHHHHH RIFCTVLQGEEGMFMPCESRDELLSRFLGTPDGKLLDAITPWVRLTPPSGVSLPAIEVHI HHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHHCCCEEECCCCCCCCCEEEEEE FHGPMLYGQNAYLASLILTLPRHGAPENVNVGIWMFDDEGLWPDKLPIVPARRDALTFAF EECCEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEE YPLRSGQ EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA