| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797056
Identifier: 114797056
GI number: 114797056
Start: 914827
End: 915840
Strand: Direct
Name: 114797056
Synonym: HNE_0896
Alternate gene names: NA
Gene position: 914827-915840 (Clockwise)
Preceding gene: 114797994
Following gene: 114797691
Centisome position: 24.69
GC content: 64.2
Gene sequence:
>1014_bases ATGGGTATTTGCCGCGTCGACATCCACATTCCCGCTGATGGCGAGGTGTATGATACTGTAATGAGGATCGTCAAAGCGGC AGACCCGATCGACTACCGGGTGCTTCCGCTGGAGCAGCAGGATCGCCGCCTGATCCACGTGGTGATGCGCGATGGCCCGG TTCAGGCATTGCTCGACAATCTCCAGTCCCTGCTGGAAGACCGTTCCGGCTGGCGCGTCACCGTCGAAGAGCTGGACCTG ACGCTTCCCAAACTGCCCGAGCCGAAAAACGAGAAAAAGAGGGCAAGCTCCCAGCATACCCGCGAGGAGCTTTACGTTCA GGTGTCCAGCAATGCGAAGCTGAACTGGGACTATGTCGTCATGGTCATCCTGTCGACCATTGTGGCGGCCGTTGGTCTTG TCTCGGACGGTGTTGCCGCCGTTATCGGCGCCATGGTGATTGCCCCGCTCCTGGGGCCGATCATGGGCTTTGCCATGGGC GCCGCCCTTGGCGAGCTGGCGCTCCTGCGCAAAGGCATCCTCACACTTCTGGCGGGGATTGGTGTCGCGCTGGTGGTCTC CTTCACCCTCGCGCTCATCATGCCGCCCAACTGGGAGAGCCGGGAGCTGATGTCCCGCGCCGAAGTGCGCCTGGATGGGC TCGCCCTCGCTATGGCGGCGGGCGGGGCAGCGGCTCTGTCGGTGACACGGGGAACGGCGTCGGCCCTCGTCGGCGTCATG GTGGCCGCCGCGCTGCTTCCCCCCGGCGCGGCCTTCGGGCTTTTCCTGGGGTATGGCGAATGGGCGCTGGCGCTCCGCGC AGCCCTGCTGCTCTGCCTCAACGTCGCCGCCCTCATCCTTTCCGCGCTGATCGTATTCCGCCTGCGCAAGATCCGTCCAC GGACATGGATTGAGCAGAAGCACGCACAGCGGGCCGTCTGGTTGAATGCGGGCATTTCCGCCGTCTTTCTCCTCGTCGCC GTGGCGCTGATCGTGATGCTTGATCTCGGCCAGACGGTGGACCTCGGCGACTGA
Upstream 100 bases:
>100_bases CGGCCCAGGTCGATCAATACTATGCCGACGTCCAGGCCATGGGCGGCAACCGCTGGGACACGTCCAGCCTCATCGCCCGC CTGGGCAGAAAGCCGGACTG
Downstream 100 bases:
>100_bases CGCAGAGCCGCGCGCTGGCCAGACTGCCACACATCGGGTTTACATCTCGGTTTGAGCCCCTACCTTGTGGCCGAGCCCTA TCCTTTAGGCGACGAGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MGICRVDIHIPADGEVYDTVMRIVKAADPIDYRVLPLEQQDRRLIHVVMRDGPVQALLDNLQSLLEDRSGWRVTVEELDL TLPKLPEPKNEKKRASSQHTREELYVQVSSNAKLNWDYVVMVILSTIVAAVGLVSDGVAAVIGAMVIAPLLGPIMGFAMG AALGELALLRKGILTLLAGIGVALVVSFTLALIMPPNWESRELMSRAEVRLDGLALAMAAGGAAALSVTRGTASALVGVM VAAALLPPGAAFGLFLGYGEWALALRAALLLCLNVAALILSALIVFRLRKIRPRTWIEQKHAQRAVWLNAGISAVFLLVA VALIVMLDLGQTVDLGD
Sequences:
>Translated_337_residues MGICRVDIHIPADGEVYDTVMRIVKAADPIDYRVLPLEQQDRRLIHVVMRDGPVQALLDNLQSLLEDRSGWRVTVEELDL TLPKLPEPKNEKKRASSQHTREELYVQVSSNAKLNWDYVVMVILSTIVAAVGLVSDGVAAVIGAMVIAPLLGPIMGFAMG AALGELALLRKGILTLLAGIGVALVVSFTLALIMPPNWESRELMSRAEVRLDGLALAMAAGGAAALSVTRGTASALVGVM VAAALLPPGAAFGLFLGYGEWALALRAALLLCLNVAALILSALIVFRLRKIRPRTWIEQKHAQRAVWLNAGISAVFLLVA VALIVMLDLGQTVDLGD >Mature_336_residues GICRVDIHIPADGEVYDTVMRIVKAADPIDYRVLPLEQQDRRLIHVVMRDGPVQALLDNLQSLLEDRSGWRVTVEELDLT LPKLPEPKNEKKRASSQHTREELYVQVSSNAKLNWDYVVMVILSTIVAAVGLVSDGVAAVIGAMVIAPLLGPIMGFAMGA ALGELALLRKGILTLLAGIGVALVVSFTLALIMPPNWESRELMSRAEVRLDGLALAMAAGGAAALSVTRGTASALVGVMV AAALLPPGAAFGLFLGYGEWALALRAALLLCLNVAALILSALIVFRLRKIRPRTWIEQKHAQRAVWLNAGISAVFLLVAV ALIVMLDLGQTVDLGD
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281364738, Length=217, Percent_Identity=29.4930875576037, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI20129117, Length=233, Percent_Identity=26.1802575107296, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI19921100, Length=167, Percent_Identity=29.940119760479, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 36084; Mature: 35953
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGICRVDIHIPADGEVYDTVMRIVKAADPIDYRVLPLEQQDRRLIHVVMRDGPVQALLDN CCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHH LQSLLEDRSGWRVTVEELDLTLPKLPEPKNEKKRASSQHTREELYVQVSSNAKLNWDYVV HHHHHHCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHH MVILSTIVAAVGLVSDGVAAVIGAMVIAPLLGPIMGFAMGAALGELALLRKGILTLLAGI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVALVVSFTLALIMPPNWESRELMSRAEVRLDGLALAMAAGGAAALSVTRGTASALVGVM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHH VAAALLPPGAAFGLFLGYGEWALALRAALLLCLNVAALILSALIVFRLRKIRPRTWIEQK HHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HAQRAVWLNAGISAVFLLVAVALIVMLDLGQTVDLGD HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GICRVDIHIPADGEVYDTVMRIVKAADPIDYRVLPLEQQDRRLIHVVMRDGPVQALLDN CEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHH LQSLLEDRSGWRVTVEELDLTLPKLPEPKNEKKRASSQHTREELYVQVSSNAKLNWDYVV HHHHHHCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHH MVILSTIVAAVGLVSDGVAAVIGAMVIAPLLGPIMGFAMGAALGELALLRKGILTLLAGI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVALVVSFTLALIMPPNWESRELMSRAEVRLDGLALAMAAGGAAALSVTRGTASALVGVM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHH VAAALLPPGAAFGLFLGYGEWALALRAALLLCLNVAALILSALIVFRLRKIRPRTWIEQK HHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HAQRAVWLNAGISAVFLLVAVALIVMLDLGQTVDLGD HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]