| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is glxR [C]
Identifier: 114797994
GI number: 114797994
Start: 913961
End: 914827
Strand: Direct
Name: glxR [C]
Synonym: HNE_0895
Alternate gene names: 114797994
Gene position: 913961-914827 (Clockwise)
Preceding gene: 114799958
Following gene: 114797056
Centisome position: 24.67
GC content: 66.78
Gene sequence:
>867_bases ATGGCGCGCACGGCATTTCTCGGCCTTGGGGTAATGGGCTTCCATATGGCGGGCCATCTTGCGCGGGCGGGCCATCAGGT CGCCGTCTGGAACCGCTCCCCGGCCAAATCGGCGGCCTGGACCGGCGTTCACCGCGGCGAAGCGGCCAAAGACCCCGCGT CTGCCGTCTTCGGCGCCGAATATGTTTTGCTGTGCCTCGGCGATGATCCCGATGTCCGCGCCGTGTTCGACGCCTTCGAG CCGAGCCTCGGCGCGGGCATGACCGTCATCGACCACACCACCGCCTCTGCCGCGCTTGCCCGCGAACTGGCCGAGCGCTG CCGCGCCAAGGGCGCCCATTTCATCGACGCGCCGGTTTCGGGCGGCGAGGCCGGCGCCATCAATGGCAAGCTCACCATCA TGTGCGGCGGGGAGGAAGCCCCCTTCGCCAAGGCCGAGCCCGTCATGAACGCCTTTGCCCGCGCGATCACCCTGATCGGC CCCAGCGGCGCGGGCCAGCTTGCCAAATCAGTCAACCAGATCTGCATCGCCGGCATCGTCCAGGGCCTCGCCGAAGGGCT CCACTTTGCCGAGAAGGCGGGTCTCGACGCGGAGAAAGTCATCGCCGCCATTTCCGGCGGCGCCGCCCAGAGCTGGCAGA TGGAAAACCGCTGGAAGACGATGACCGACGGAAAATTCGATTTCGGCTTCGCGGTTGACTGGATGCGCAAAGATCTCCGC ATCACGCTGGATGCCGCCCGCGAAAACGGCGCAAGCCTTCCCCTCACGGCCCAGGTCGATCAATACTATGCCGACGTCCA GGCCATGGGCGGCAACCGCTGGGACACGTCCAGCCTCATCGCCCGCCTGGGCAGAAAGCCGGACTGA
Upstream 100 bases:
>100_bases CGCAGGGTGTATCAGGTCGTGGTGAAAGCCACGCTTCGGCCAGGGGTGGGATTTCGATGAAATTCGCTCTAATTGGCCTT GAATTCATAAGGAGACTGGC
Downstream 100 bases:
>100_bases TGGGTATTTGCCGCGTCGACATCCACATTCCCGCTGATGGCGAGGTGTATGATACTGTAATGAGGATCGTCAAAGCGGCA GACCCGATCGACTACCGGGT
Product: 3-hydroxyisobutyrate dehydrogenase family protein
Products: 2-methyl-3-oxopropanoate; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MARTAFLGLGVMGFHMAGHLARAGHQVAVWNRSPAKSAAWTGVHRGEAAKDPASAVFGAEYVLLCLGDDPDVRAVFDAFE PSLGAGMTVIDHTTASAALARELAERCRAKGAHFIDAPVSGGEAGAINGKLTIMCGGEEAPFAKAEPVMNAFARAITLIG PSGAGQLAKSVNQICIAGIVQGLAEGLHFAEKAGLDAEKVIAAISGGAAQSWQMENRWKTMTDGKFDFGFAVDWMRKDLR ITLDAARENGASLPLTAQVDQYYADVQAMGGNRWDTSSLIARLGRKPD
Sequences:
>Translated_288_residues MARTAFLGLGVMGFHMAGHLARAGHQVAVWNRSPAKSAAWTGVHRGEAAKDPASAVFGAEYVLLCLGDDPDVRAVFDAFE PSLGAGMTVIDHTTASAALARELAERCRAKGAHFIDAPVSGGEAGAINGKLTIMCGGEEAPFAKAEPVMNAFARAITLIG PSGAGQLAKSVNQICIAGIVQGLAEGLHFAEKAGLDAEKVIAAISGGAAQSWQMENRWKTMTDGKFDFGFAVDWMRKDLR ITLDAARENGASLPLTAQVDQYYADVQAMGGNRWDTSSLIARLGRKPD >Mature_287_residues ARTAFLGLGVMGFHMAGHLARAGHQVAVWNRSPAKSAAWTGVHRGEAAKDPASAVFGAEYVLLCLGDDPDVRAVFDAFEP SLGAGMTVIDHTTASAALARELAERCRAKGAHFIDAPVSGGEAGAINGKLTIMCGGEEAPFAKAEPVMNAFARAITLIGP SGAGQLAKSVNQICIAGIVQGLAEGLHFAEKAGLDAEKVIAAISGGAAQSWQMENRWKTMTDGKFDFGFAVDWMRKDLRI TLDAARENGASLPLTAQVDQYYADVQAMGGNRWDTSSLIARLGRKPD
Specific function: Glyoxylate catabolism. [C]
COG id: COG2084
COG function: function code I; 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-hydroxyisobutyrate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI23308751, Length=291, Percent_Identity=28.1786941580756, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI40556376, Length=288, Percent_Identity=23.9583333333333, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1786719, Length=285, Percent_Identity=34.7368421052632, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI145693186, Length=284, Percent_Identity=33.4507042253521, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1790315, Length=288, Percent_Identity=29.1666666666667, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1789092, Length=281, Percent_Identity=27.7580071174377, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788341, Length=205, Percent_Identity=27.8048780487805, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17557316, Length=274, Percent_Identity=27.3722627737226, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24655230, Length=283, Percent_Identity=30.3886925795053, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI19922568, Length=283, Percent_Identity=30.3886925795053, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI28574115, Length=284, Percent_Identity=23.5915492957746, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002204 - InterPro: IPR015815 - InterPro: IPR008927 - InterPro: IPR006115 - InterPro: IPR013328 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF03446 NAD_binding_2 [H]
EC number: 1.1.1.31
Molecular weight: Translated: 30257; Mature: 30125
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00895 3_HYDROXYISOBUT_DH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTAFLGLGVMGFHMAGHLARAGHQVAVWNRSPAKSAAWTGVHRGEAAKDPASAVFGAE CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHCCE YVLLCLGDDPDVRAVFDAFEPSLGAGMTVIDHTTASAALARELAERCRAKGAHFIDAPVS EEEEEECCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCC GGEAGAINGKLTIMCGGEEAPFAKAEPVMNAFARAITLIGPSGAGQLAKSVNQICIAGIV CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH QGLAEGLHFAEKAGLDAEKVIAAISGGAAQSWQMENRWKTMTDGKFDFGFAVDWMRKDLR HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCE ITLDAARENGASLPLTAQVDQYYADVQAMGGNRWDTSSLIARLGRKPD EEEEECCCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure ARTAFLGLGVMGFHMAGHLARAGHQVAVWNRSPAKSAAWTGVHRGEAAKDPASAVFGAE CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHCCE YVLLCLGDDPDVRAVFDAFEPSLGAGMTVIDHTTASAALARELAERCRAKGAHFIDAPVS EEEEEECCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCC GGEAGAINGKLTIMCGGEEAPFAKAEPVMNAFARAITLIGPSGAGQLAKSVNQICIAGIV CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH QGLAEGLHFAEKAGLDAEKVIAAISGGAAQSWQMENRWKTMTDGKFDFGFAVDWMRKDLR HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCE ITLDAARENGASLPLTAQVDQYYADVQAMGGNRWDTSSLIARLGRKPD EEEEECCCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-hydroxy-2-methylpropanoate; NAD+
Specific reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA