Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114564432

GI number:

Start: 3913289

End: 3915835

Strand: Reverse

Name: Not Available

Synonym: Sfri_3271

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564433

Following gene: 114564431

Centisome position: NA

GC content: NA

Gene sequence:

>2547_bases
ATGACCACGACATTGCCGATTCACGCGGTACTCGACTCGTTGCGTGTGCAGTTTTCGGCCCATTCACACATCATTATCGA
AGCGCCAACCGGTGCAGGTAAATCCACTGCATTACCATTAGCGATGTTAGCCTGGCCCGAAATTCGTGGCAAAATTCTGA
TGTTAGAACCCCGTCGAGTCGCCGCCCGCAATGTCGCCAAGTTTATTGCCCAACAATTGGGCCAAAATGTTGGCCAGCAA
GTGGGTTATCGTGTTCGCGGTGAGTCAAAAGTCAGTGCAGATACTCGATTAGAAATTGTCACCGAAGGTATTCTGACCCG
CATGATCCAACAAGACCCTGAGCTTAGTGGGATTGATGTGATTATTTTTGATGAAATACATGAACGTCATCTTACGACTG
ATTTAGGCTTGGCTTTAGCATTGGAAGTGCAGCAATCATTACGTGACGATTTACACATTATTGCTATGTCTGCCACCTTG
TCTGGCTTACCGCTAGACACGTTAATGCCCGATGCTGCGCAAATACACAGTGATGGCCGCAGTTTTGAGGTTGAGATTGC
TTATCAGCCTTGCCCTGGACAACAGTTGTGGCTAACACACATGTCCCGCGTGATTATCGATACCATTTCAGATCCCAATC
TAGCGCAATATCAACAAGGCAGCGTTTTGGCGTTTTTACCCGGTAAAGGTGAGATCCGTAAATTAGCTGGATTATTGCGT
GAGCGTTTAGATGCATCATGGCTTATTTGTCCTATGTATGGCGACTTGTCGTCAGCGGAGCAAGATCAAGCCATTCGTGC
AGCAGAACCGGGTAAACGTAAAATAGTTCTCGCGACTAATGTGGCAGAATCGAGTTTAACGATTGAAGGCATCACCCTTG
TTATAGACAGCGGTTATCGACGTGAAGCGAGTTTTAACCCTAAAACCGGCGTGACACGCTTAGGGCTTAAGCGCATTAGC
CAGGCATCGGCTATTCAGCGTAGTGGCCGAGCTGGGCGCTTAGCAGCGGGTTATTGTGTGCGTTTGTGGAGCCAAGAAGA
ACAAGGGCGAATGCGTAAAGTCGATGAGCCTGAAATTACGCAAGCAGAACTGACTTCGATGGCGCTTGATTGTGCTAATT
GGGGCGCTAAATCATTTGCTGAATTATCGCTGCTCACACCGCCACCTACGATCCACGAACAAGTCGCTTGGCGATTACTT
ATTCAACTGGAATTAATCAACCAGCAACATAAGTTAACGCCACTTGGCCGAGAGGCTTATGCATTAGGTTGCCATCCACG
CTTAGCGCATATGCTGCTTAAAGCTAAGCAACTTGCCTTGCACGACAATCAGCCGCAACTTTGCCTGCTGGCTTGCGTAT
TAGCAGGCATTATTGAAGCCCGTGGACTACCGAAAAAAGGCGCTGATATTCATCATTATTTGACCGAGGCTTTGCAGGGG
CAGATTAAACAGCAAGTAAGGCAATGGCAACAATCTTTGGCGATATCGGGACAGGTCAATGAAGCAATACGTAATGCTTC
TACTCGTGATATTAGTTATTTGTTAGCACTTGCTTACCCTGATCGTATTGCCAAAGCCCGTGGTCATGAAGGCTTTTTGT
TAAGTAATGGTACGGGGGTGATGATCAATGCCGAAGACAGTTTGGCTCATGAACCTTGGTTAGTGGTTGCTGACTTTCAA
GAGATGCAAGGTCGTAATGCTGGGCAAATTTACCTTGCGGCAAGGTTAGATGAACGCTTGTTTACTGCAGAACTTGCCTC
GTTAGTGACCACTCATGTTCACGGTGGTTGGGATGAAGCAAAAGGGCGTTTCTTTGCTGAAAAGCACACCAAAATCGGTG
AGGTTATCATTAAAATCGACACCGGTATTACACCTGAACGAGCACACATTACCGCCGCATTAGTAGCGCAAATCCGTATA
AAAGGGTTAACAATCCTTAATCGTGATGATCTGTTAATCCAGTTACAATATCGGGTTGAATTAGCTCGATACTTTGCGCC
AGAGCATGATTGGCCTTGTTTAAGCGATGAGTACTTGCTGGCTACATTAGAAGATTGGCTTGGGCCGCATTTAGACAACA
TTCGTTCATTGGCCGCATTGTCTAAAGTAGGCGCGTATGGATTGGTGAAAAATTTACTCAATTGGCAACAGCAACAGCTA
TTAGATCAACTGGTGCCAACACATTGGCCGATGGCAACTGGCACACGTGCCCCCGTCCGTTACCAGATGCCACTTGATAC
AGACGGACATTTTTATCATAACAACGAACAGCAAGGCCGTGCGTTGCTTAGTGTACGTTTACAAGAAGCATTAGGAATGG
CGCAAAGCCCGACAATATTACACGGCAAAATGACGGTTACTATGGAGTTGTTGTCGCCAGCACAACGACCATTAGCCGCC
ACGGCAGATTTAGCCAGCTTTTGGCAAGGGCCATATATTGATGTAAAAAAAGAAATGCGCGGTCGTTATCCTAGGCATTT
ATGGCCTGATGACCCAGTGAACACTGTGGCAACAAAATTTACTAAAAAGAAAACTCCAGGCGTGTAA

Upstream 100 bases:

>100_bases
GACACCTTGATACAATGTGGGTAAAATGAGCCGCAGAAAATAGCCGTAAAAGTTAATCGCGTTGACCTCAAAACAAGTTT
TGCAGCAGCACCCATCATTG

Downstream 100 bases:

>100_bases
ATAAGCCATCGAGCTTATTCATAACATGCAATTATTTCAGCGTTATATGGAAAACGAAACCATTATTTATGAGTAAAAAA
ACCAAAAAGTCTTCAGCCAA

Product: ATP-dependent helicase HrpB

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>848_residues
MTTTLPIHAVLDSLRVQFSAHSHIIIEAPTGAGKSTALPLAMLAWPEIRGKILMLEPRRVAARNVAKFIAQQLGQNVGQQ
VGYRVRGESKVSADTRLEIVTEGILTRMIQQDPELSGIDVIIFDEIHERHLTTDLGLALALEVQQSLRDDLHIIAMSATL
SGLPLDTLMPDAAQIHSDGRSFEVEIAYQPCPGQQLWLTHMSRVIIDTISDPNLAQYQQGSVLAFLPGKGEIRKLAGLLR
ERLDASWLICPMYGDLSSAEQDQAIRAAEPGKRKIVLATNVAESSLTIEGITLVIDSGYRREASFNPKTGVTRLGLKRIS
QASAIQRSGRAGRLAAGYCVRLWSQEEQGRMRKVDEPEITQAELTSMALDCANWGAKSFAELSLLTPPPTIHEQVAWRLL
IQLELINQQHKLTPLGREAYALGCHPRLAHMLLKAKQLALHDNQPQLCLLACVLAGIIEARGLPKKGADIHHYLTEALQG
QIKQQVRQWQQSLAISGQVNEAIRNASTRDISYLLALAYPDRIAKARGHEGFLLSNGTGVMINAEDSLAHEPWLVVADFQ
EMQGRNAGQIYLAARLDERLFTAELASLVTTHVHGGWDEAKGRFFAEKHTKIGEVIIKIDTGITPERAHITAALVAQIRI
KGLTILNRDDLLIQLQYRVELARYFAPEHDWPCLSDEYLLATLEDWLGPHLDNIRSLAALSKVGAYGLVKNLLNWQQQQL
LDQLVPTHWPMATGTRAPVRYQMPLDTDGHFYHNNEQQGRALLSVRLQEALGMAQSPTILHGKMTVTMELLSPAQRPLAA
TADLASFWQGPYIDVKKEMRGRYPRHLWPDDPVNTVATKFTKKKTPGV

Sequences:
NA

Specific function: NA

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA