Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564433

GI number:

Start: 3916025

End: 3918286

Strand: Reverse

Name: Not Available

Synonym: Sfri_3272

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564435

Following gene: 114564432

Centisome position: NA

GC content: NA

Gene sequence:

>2262_bases
ATGGCCGATAGCACCCAGCAACTATTGAAAAGTGTTTTTACAAATGGACCTATTGAGGGTAATGATACTTCGGTGTTATC
ACTGCTTAATCAAGCATTAGAATTAGTCTGTCAAAGGCTAGAATGCAGCGCTGCATTTGTGTTGACTAGTCAATATGATA
AATTATTTGCCGTTGATACTGATATTATCGACACTTCAGAGCAACAATGTGTCAGTCATTTTGGTGCTTCACCTGCATCA
GAAGCGCTGTTTAACAAGCATTTACAAGATAATTTATCACTGTGCGAATCATTATTTAACAGCCATCAATCAATCATTTA
TCCCCATTCCCCAGAGAAATCATTTACCGCTGATGAAAATCGACTCCTTACACCGCTTTTAGACATCTTTAATCAACTCG
ATATTGATTGTAAGCATCTTGCTCTGAGTCCTGTTTTGCACGTTGGTAATGTCAAAGTTGTTTTAGGCACTATGTGTGCA
TCCGATGCTAATCCCGTTGTGGGTCAGCAAGACGATCCTTGTGCGTTTGTGCAAAAGTTACTCGATGACACCGCATACCA
ATTAGCCTCTTCACTTGAGCTTCGTCGTTTATCCGTGCTTTTAGACAGTAAAGATAAACAGTATCAAGAGCTTTTTCAGT
TACTGCCGATGCCATGTGCGCTGATTGATTTACACAATAATGTTGTATTGCAAAATGATGCGAGTAAACAAAATTTGCCC
ATTACAGTCGGGCAGAGTTTATTTTCGTTGTTACGAGAAGAAGATCATCCCTTGTTACTCGATACCTTACATATCGTTCG
AGAAGGTATTTTACGCCAAGCCTGGTGTGAAGTACCGTTACGAAATGGGGTTCAAATTTACTGGTATAAATTCAGCTTTT
GTCATGCGCTTAATAAGCAGCAACAGTTATTGTTAATGATTGAAGATGTCACCGAGCGTTATCGACTTGCCGATGAGTTA
TCGTTTCATTCAAATTATGATGTGCTAACCGGATTACCAAATCGATTGCAGTTCGAAAACATGCTTGAAGAGTTATTAAA
AGATGAAGAGCATATACCTGCTTGTATTGCCTTTCTCGATCTCGATCAATTTCAAGTGGTAAATGATCTTAGCGGCCATC
AAGCGGGTGATGTGTTGCTGCAACAAGTGGCTGTGCGATTAAAACAATTATTACGTAAAGACGATGTTGTTGCGCGTTTA
GGCGGCGATGAGTTTGGCTTATTGATGCACTATTCAGATACCGCATCGGCGCAACAAGTGGCAAAACGAATTTGCCAACA
GTTGTTTGATCATGAATTTACTTGGAAAGGTATCAAGCACAATATTAGTGCCAGTATTGGTATTGCCAAAGTCGATTATG
TTGACTCAGATATTTACGGCGTGATGAGTAAAGCTGATGCCGCTTGCCGTCTGGCCAAAGAAGAAGGCCGTAACCGTTGG
CATTTTTATAATCCTGACGATCCACAAATGCACATGATGTATAACCAAATGTTGGCATCTGTGGATATTACAGGCGCACT
GGCGTTAAATCAGTTTGAGTTATTTTATCAATTAATCGAGCCGCTCGATAAACCCGACACTGGTATCCACATGGAAATTC
TACTTCGCATGGTACAAAGCGATGGCCAGTATGTATCGCCAGGGGTGTTTTTACCTGCTGCTGAGCGTTACAACTTAGCG
CCTCGAGTAGACCGTTGGGTTATCGATAATTTATTGAAGTGGGGTGGTAATAATTTAGCCATATGGGAACAGCTTTCAAT
GGTGTCGGTGAATTTGTCTGCGATGTCACTTGCCGACAATAAGTTCATGACTTGGCTCGAAATGCGCTTAATGGTTGAAC
CTGAACTGGTGAGTAAATTATGTTTTGAAATTACCGAAACCGCAGCGGTAAGCCAATTAGACCAAGCTACTGGGTTAATT
GAGTTGTTACGGCCATTTGGTTGTAAGATTGCATTAGATGATTTTGGTTCTGGCTTTTCCAGCTTTGCGTATTTAAAGTG
TCTTGATGTTGATTACGTTAAAATTGACGGCCAATTTGTGGTGAATTTATGCGAAAACCGCAGTGATAAAGCTATTGTTT
CGGCGATATGTCAGCTCGGTAAAGACATGGGTTTTGAAGTTATCGCAGAGTTTGTTGAAAACACCGACATTGGTGTATAT
CTGAAAAATATTGGTGTCGATTATGCGCAAGGCTATGCCATTAATAAACCGACACGATTAGCTGAATTACAACACGGTTT
ACGGACTCCTTGGTTAACATAA

Upstream 100 bases:

>100_bases
GTGCTTATAGTTAGTGCTTATAGTTAGCGATATGGCATCCACAAGATAACTGATTTTATTCCCAAGCAAATTGAATTGCT
AACCTTGAATGAGTTGATGA

Downstream 100 bases:

>100_bases
GTTGAGTGAGTAAAGTAACTCAATAACTGAGAGCGGTTAATTGCTTTGTTAAAAAGGTAGTGAAATAGACAGTGAAATAG
GCAATTAATGACACCTTGAT

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>753_residues
MADSTQQLLKSVFTNGPIEGNDTSVLSLLNQALELVCQRLECSAAFVLTSQYDKLFAVDTDIIDTSEQQCVSHFGASPAS
EALFNKHLQDNLSLCESLFNSHQSIIYPHSPEKSFTADENRLLTPLLDIFNQLDIDCKHLALSPVLHVGNVKVVLGTMCA
SDANPVVGQQDDPCAFVQKLLDDTAYQLASSLELRRLSVLLDSKDKQYQELFQLLPMPCALIDLHNNVVLQNDASKQNLP
ITVGQSLFSLLREEDHPLLLDTLHIVREGILRQAWCEVPLRNGVQIYWYKFSFCHALNKQQQLLLMIEDVTERYRLADEL
SFHSNYDVLTGLPNRLQFENMLEELLKDEEHIPACIAFLDLDQFQVVNDLSGHQAGDVLLQQVAVRLKQLLRKDDVVARL
GGDEFGLLMHYSDTASAQQVAKRICQQLFDHEFTWKGIKHNISASIGIAKVDYVDSDIYGVMSKADAACRLAKEEGRNRW
HFYNPDDPQMHMMYNQMLASVDITGALALNQFELFYQLIEPLDKPDTGIHMEILLRMVQSDGQYVSPGVFLPAAERYNLA
PRVDRWVIDNLLKWGGNNLAIWEQLSMVSVNLSAMSLADNKFMTWLEMRLMVEPELVSKLCFEITETAAVSQLDQATGLI
ELLRPFGCKIALDDFGSGFSSFAYLKCLDVDYVKIDGQFVVNLCENRSDKAIVSAICQLGKDMGFEVIAEFVENTDIGVY
LKNIGVDYAQGYAINKPTRLAELQHGLRTPWLT

Sequences:
NA

Specific function: NA

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA