Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114564431

GI number:

Start: 3910920

End: 3913220

Strand: Reverse

Name: Not Available

Synonym: Sfri_3270

Alternate gene names: NA

Gene position: NA

Preceding gene: 114564432

Following gene: 114564422

Centisome position: NA

GC content: NA

Gene sequence:

>2301_bases
ATGAGTAAAAAAACCAAAAAGTCTTCAGCCAACACAAAAAAAAGTGGCTCATCTTGGTGGCAAAAACTGTGGTCGCTCAC
ATGGAAATTATCAATCGTTGGTATCGCTGTTGTGAGCTTTTATGCGATTTATTTAGACCAAATTATTGCGCAGAAATTTG
AAGGCCAAAAGTGGCATTTACCTGCCCAGGTGTTTAGTCGTTCAATGGCATTATATCCAGGGGCTGCGGTAAACCATCCG
CAGTTAATGGCTGAGCTTAAGTTACTCGGTTATCGTAAAGTGTCTAATCCACGACAAGTTGGCGAATTTTCTGCTTCAAG
TACTCGTATCGAATTATGGCGTCGACCATTTTTGCATCCCGAAGGCAATCAAGCCGAGCAACGAGTGATGATTAGTTTTG
ACTCTGAAGGCGTTAGCTCAGTTAAGCGGATGTCAGATAAACGGGAATTAGCGGTATTTCATTTAGAACCGGTATTACTT
GACCGTATTATTACCGGCGATGGCGAAGACCGTTTATTTGTGCGAACGCCAGAGATGCCTTCGATGATCATCGATGCACT
TATTTTGGTTGAAGACCGCAGCTTTTATGATCACTTTGGGGTTAACCCATTGGCGATTGCACGTGCTGCCGTAGTCAACA
TTACTGCTGGTCGGACGGTACAAGGTGGTTCAACCTTAACCCAGCAGTTAGCCAAAAACTTCTTTTTAAGCAGTGAACGT
TCAATTGTGCGTAAAGTGCGTGAAGCGATAATGGCATTGATTATCGATTTTCGTTATAGCAAAGATGAAATTCTAGAAGC
TTATCTCAATGAAGTGTACATGGGCCAAGACAAGGCTCGTGGTGTGCATGGTATGGGGTTAGCTTCACAATTCTACTTTG
GTCGCCCTATTGGTGAGCTGACCGTGTCGCAGCAAGCCTTTTTAGTTGCGGTCATTAAAGGACCTTCTTATTACAACCCG
TGGCGTTACCCTGAACGAGCTCAAGAGCGCCGTGATTTAGTGTTACGTCTGCTAATGGAAAGCGATAAATTAACCGTTGC
CCAATATAAAGCAGCAGCAGAGTCGCCAATCGGTTTACGCAGCGCTAAAAAATCGGTACATCAGAAGTTACCAGCGTTTT
TTGCTGTGGTTAAACAAGAGTTACGCGACCGTTATGGTGATTCGTTACTGAAGCAGTCGGGCGTAAAAGTGTATACCACG
CTCGATCCTATGGCCCAAGAAGCCGCAGAAAAAGCCGTGTTGTCTACCATGGCATCACTGGATAAACGGGCTAAAAACGT
TCAAGTCGGCATGGTTGTTACTGACAAATATACCGGCGGCATTGCTGCGATGGTGGGTGATAAACAACCGAGTTATGAAG
GGTTTAATCGCGCGGTTGAGATTAGACGTCCCATTGGGTCGTTAATCAAACCATTCGTGTATGCCAGTGCATTACGCCAA
GCAGATAGATTTACTCTAGCCACTCCCGTAGAGGACAAACCGATCACCCTTAAAAATGAGCAAGGGAAAACATGGTCACC
TAAAAACGTTGATAAAAAGTTCAGTGGTCAAGTGCCTTTGTTAAACGCATTTAAAGATTCAATGAACGTTCCAACGGTTA
ATGTTGGTTTGGCTGTTGGCGTTGAAAAGGTTGCTGCTACATTGAAAAAATCGGGCTGGGAGGATGATATATCCCCTTAT
CCATCGATGTTGTTGGGGGCGGTGAATGGCTCTCCATTAATGGTGGCTCAAGTTTATCAAACCATTGCTGATGAAGGCCG
CTATCGTAAGTTATCATCAATTACCGCGGTATTAGACAGTCAAAACCAAGCGTTGGAAGTGACTCGTGTTCCATCGTCGA
TGGCGATCGATCCGGCGACCGATTACTTAGTTCAATATGCAATGAACCAGGTAGTACGTAATGGTACGGCTAAGCGTTTA
GGCGCAGCATTTCCTGGAGTTCGTTTAGCGGGTAAAACCGGCACTAGTAATGATAGTCGTGACTCGTGGTTTGCTGGATT
TGATGAACGTAACGTAGCGGCTATTTGGGTTGGTCAAGACGATAACAGTAAAACGGGCCTGTATGGCAGCAGCGGCGCAA
TGGCAGTGTATCAAGCCTTTTTACATGAACGTCCACCGCTCAGTTTACGTATGATGCCGGTTAATGGCGTAATTAATGGC
TATTTTGATCGTACAACGGGTGTGGCTAAGAAAGGTAATTGTGACAATATTATCGGTCTACCAGCATTAGACGCAAGCTA
TCATCCGGTAGCTAATTGTGGTGAGTCATTATCTTGGTGGCAGAAGCTGGTGGGAGAGTAA

Upstream 100 bases:

>100_bases
AATTTACTAAAAAGAAAACTCCAGGCGTGTAAATAAGCCATCGAGCTTATTCATAACATGCAATTATTTCAGCGTTATAT
GGAAAACGAAACCATTATTT

Downstream 100 bases:

>100_bases
CGCGTTAGCTTAACCATTATGTAGTTGCCAACAATAAGCCCAAAGTAAGTGATTACTTTGGGCTTATTGTTTCATCTCAT
CGGGATAATAAACGTTTTTA

Product: penicillin-binding protein 1B

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>766_residues
MSKKTKKSSANTKKSGSSWWQKLWSLTWKLSIVGIAVVSFYAIYLDQIIAQKFEGQKWHLPAQVFSRSMALYPGAAVNHP
QLMAELKLLGYRKVSNPRQVGEFSASSTRIELWRRPFLHPEGNQAEQRVMISFDSEGVSSVKRMSDKRELAVFHLEPVLL
DRIITGDGEDRLFVRTPEMPSMIIDALILVEDRSFYDHFGVNPLAIARAAVVNITAGRTVQGGSTLTQQLAKNFFLSSER
SIVRKVREAIMALIIDFRYSKDEILEAYLNEVYMGQDKARGVHGMGLASQFYFGRPIGELTVSQQAFLVAVIKGPSYYNP
WRYPERAQERRDLVLRLLMESDKLTVAQYKAAAESPIGLRSAKKSVHQKLPAFFAVVKQELRDRYGDSLLKQSGVKVYTT
LDPMAQEAAEKAVLSTMASLDKRAKNVQVGMVVTDKYTGGIAAMVGDKQPSYEGFNRAVEIRRPIGSLIKPFVYASALRQ
ADRFTLATPVEDKPITLKNEQGKTWSPKNVDKKFSGQVPLLNAFKDSMNVPTVNVGLAVGVEKVAATLKKSGWEDDISPY
PSMLLGAVNGSPLMVAQVYQTIADEGRYRKLSSITAVLDSQNQALEVTRVPSSMAIDPATDYLVQYAMNQVVRNGTAKRL
GAAFPGVRLAGKTGTSNDSRDSWFAGFDERNVAAIWVGQDDNSKTGLYGSSGAMAVYQAFLHERPPLSLRMMPVNGVING
YFDRTTGVAKKGNCDNIIGLPALDASYHPVANCGESLSWWQKLVGE

Sequences:
NA

Specific function: NA

COG id: COG0744

COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA