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The map label for this gene is cbbEC [H]

Identifier: 114332061

GI number: 114332061

Start: 2220127

End: 2220807

Strand: Direct

Name: cbbEC [H]

Synonym: Neut_2096

Alternate gene names: 114332061

Gene position: 2220127-2220807 (Clockwise)

Preceding gene: 114332057

Following gene: 114332062

Centisome position: 83.43

GC content: 49.93

Gene sequence:

>681_bases
ATGTATCGCATTGCCCCTAGCATTCTTTCTGCCAATTTTGCCAGACTAGGCGAAGAAGTCACACAAGTCCTGGATTCTGG
TGCGGACATCATTCACTTCGATGTCATGGATAATCATTACGTTCCCAATCTGACGATCGGGCCACTGGTATGCGAAGCGA
TCCGCCCTCTGACCAAAGCAATTATCGACGTGCATCTGATGGTTGAACCAGTTGATCGCATTATTCCGGATTTTGCCAAG
GCGGGCGCCAACATTATCTCCTTTCATCCGGAAGCTTCGCGGCATATTGACCGTACCATCGGGCTCATCAAAGAGCAAGG
ATGCAAAGCAGGCATGGTTTTCAATCCGGCCACACCGCTTTCGTATCTTGATCATGTTCTGGATAAACTTGATCTGATCC
TAATTATGTCGGTCAATCCCGGGTTTGGCGGGCAGGCCTTTATTCCCGAGGCACTGAACAAACTGCGTCTGACAAGAGAA
CGCATCAATGCAAGCGGTCGCGATATTCTGCTGGAAATTGACGGTGGCGTGAAGGTGAGTAATATTGCAGAAATTGCTCG
CGCTGGTGCGGATACGTTTGTTGCGGGCTCCGCCATTTACAGTGCAGGTAAAGACAGCGATCCTCATCGCTACGATAGCG
TTATCGCTGCCATGCGGGCCGAATTAGCAAAAGTTACCTGA

Upstream 100 bases:

>100_bases
GACATCGATAATATGAAAAACCCGTATGGATACAAAAGCATTATTAACTCCCGGTTTCTTTTTATGGTTAAAATGTAACA
TTTCCTTATGAGGCCAAATC

Downstream 100 bases:

>100_bases
CCAGGAACCAACATATGACCCAATCTAACATACAACCGTCCAATCGAACCTCGTTTCCGATTCCACTTAAAGCTGTCATC
ATTGATCTGGATGGCACTCT

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MYRIAPSILSANFARLGEEVTQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTKAIIDVHLMVEPVDRIIPDFAK
AGANIISFHPEASRHIDRTIGLIKEQGCKAGMVFNPATPLSYLDHVLDKLDLILIMSVNPGFGGQAFIPEALNKLRLTRE
RINASGRDILLEIDGGVKVSNIAEIARAGADTFVAGSAIYSAGKDSDPHRYDSVIAAMRAELAKVT

Sequences:

>Translated_226_residues
MYRIAPSILSANFARLGEEVTQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTKAIIDVHLMVEPVDRIIPDFAK
AGANIISFHPEASRHIDRTIGLIKEQGCKAGMVFNPATPLSYLDHVLDKLDLILIMSVNPGFGGQAFIPEALNKLRLTRE
RINASGRDILLEIDGGVKVSNIAEIARAGADTFVAGSAIYSAGKDSDPHRYDSVIAAMRAELAKVT
>Mature_226_residues
MYRIAPSILSANFARLGEEVTQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTKAIIDVHLMVEPVDRIIPDFAK
AGANIISFHPEASRHIDRTIGLIKEQGCKAGMVFNPATPLSYLDHVLDKLDLILIMSVNPGFGGQAFIPEALNKLRLTRE
RINASGRDILLEIDGGVKVSNIAEIARAGADTFVAGSAIYSAGKDSDPHRYDSVIAAMRAELAKVT

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=224, Percent_Identity=37.0535714285714, Blast_Score=152, Evalue=2e-37,
Organism=Homo sapiens, GI219879828, Length=224, Percent_Identity=36.1607142857143, Blast_Score=145, Evalue=4e-35,
Organism=Homo sapiens, GI24307923, Length=174, Percent_Identity=31.6091954022989, Blast_Score=86, Evalue=4e-17,
Organism=Escherichia coli, GI1789788, Length=226, Percent_Identity=69.4690265486726, Blast_Score=318, Evalue=2e-88,
Organism=Escherichia coli, GI1790523, Length=197, Percent_Identity=35.5329949238579, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1790754, Length=202, Percent_Identity=29.2079207920792, Blast_Score=87, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17552948, Length=208, Percent_Identity=38.9423076923077, Blast_Score=141, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6322341, Length=234, Percent_Identity=38.034188034188, Blast_Score=158, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24586301, Length=205, Percent_Identity=38.5365853658537, Blast_Score=146, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24483; Mature: 24483

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRIAPSILSANFARLGEEVTQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTKA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
IIDVHLMVEPVDRIIPDFAKAGANIISFHPEASRHIDRTIGLIKEQGCKAGMVFNPATPL
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
SYLDHVLDKLDLILIMSVNPGFGGQAFIPEALNKLRLTRERINASGRDILLEIDGGVKVS
HHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEHH
NIAEIARAGADTFVAGSAIYSAGKDSDPHRYDSVIAAMRAELAKVT
HHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYRIAPSILSANFARLGEEVTQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTKA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
IIDVHLMVEPVDRIIPDFAKAGANIISFHPEASRHIDRTIGLIKEQGCKAGMVFNPATPL
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
SYLDHVLDKLDLILIMSVNPGFGGQAFIPEALNKLRLTRERINASGRDILLEIDGGVKVS
HHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEHH
NIAEIARAGADTFVAGSAIYSAGKDSDPHRYDSVIAAMRAELAKVT
HHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1429456 [H]