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The map label for this gene is omp85 [H]

Identifier: 114331993

GI number: 114331993

Start: 2141410

End: 2143686

Strand: Reverse

Name: omp85 [H]

Synonym: Neut_2027

Alternate gene names: 114331993

Gene position: 2143686-2141410 (Counterclockwise)

Preceding gene: 114331994

Following gene: 114331992

Centisome position: 80.56

GC content: 46.38

Gene sequence:

>2277_bases
ATGAAATTCAGGTTTTATGCATTATTTTTTTTCCTGTATTCAATAGGCTGTGCGGCAAATGATTCATTCGTGGTCAAGGA
TATCCGGGTGGAGGGTATTCAGCGTACCGAGGCTGGAACAATATTCAGTTATCTGCCTGTTAAAGTCGGCGATGTACTCG
ACAGTAAAAAAGCCAGTGCGGCGATCAAAGCATTGTATGCAACCGGTTTTTTCAGTGATGTCAAACTGAAATCCGAAGGA
GAGCTGTTGATTGTACAGGTTCAGGAACGCCCTGCAATCGCGCAGATCACAATCAACGGTGCAAAGGAATTTGACAAGGA
TAAACTCAAGGAAGGGCTGAAGCAGGCAGGCTTATCAGAATCTCGTATTTTCAGTCGTTCGCTGCTTGAAAAGGCTGAAC
AGGAATTGAAGCGTCAGTACATCAGCCGGGGTAAGTATGCCGTCAAAATTACGACCACAACCACGCCGCTGGAACGAAAC
CGTATCGGTATCAATTTCGATATCAAGGAAGGAAAAACAGCTCGGATCAAGCAAATCAACATCGTCGGCAATCATGTTTT
TCCTGAAGATGATCTGACCGGTCTGTTCAGTCTCAAAACACCGGGTTTTATGACATGGTTTACGAAGGACGATCAGTATT
CAAAGCAAAAATTATCGGCTGATCTTGAAACGCTACGTTCCTATTATCTTGATCGGGGGTATCTGGAGTTTAATATTGAA
TCTACGCAAGTTTCGATTACGCCGGATATGAAAGATATTTACATTACAGTCAATGTAACGGAAGGTCCTCAATATACGGT
GTCCGATATAAAACTGGCCGGCGAGTTGCTTGTGCCGGAAGAAGAGTTGCGTAAATTGATCAAGCTTGAACCAGGTGGCG
TATTTGTCCGCGAGAAGCTGACTGAATCTATCAAGCTAATCAGTGACAGGCTGGGGAATGATGGTTACGCCTTTGCCAAT
GTCAATGCATCACCGGAGCTGGACAAGGAAACTCGCAAGACAGCCTTTACTTTTTTTATCGACCCAGGGCGCCGGGTTTA
TGTCAGACGCATTAATATTAGCGGTAATGAACGTACCCGGGATGAAGTGATACGGCGTGAGTTCCGGCAAATGGAAGGGG
GCTGGCATTCTACTGAACAGATCAATCGCTCCCGCCAACGGGTGGACAGGCTGGATTTTTTTACCAGCGTTAACGTTGAA
ACTCCCCCGGTTGCCGATGTTCCGGATCAGGTGGATATCAATGTCAATGTAGTTGAGAAGCCAACTGGAGCAATCATGTT
TGGTGCCGGCTATTCTGATCGCGAAGGGATTATCCTGAATGGATCAATTGCCCAGAACAATATTCTGGGGACGGGTAATT
TTCTTAGTCTGCAGGTGAATACCGGGAGCGTTAACAAGATCATCTCGGCTTCATTTAGTAATCCGTATTATACGATTAAT
GGAGTCAGTCTCGGTCTGGAAGCGTTCAGACGTGACATCAATACCCGCTCTCTGAGCAGGGTGGGGGTGTTTAATACCGA
TACGACTGGTGCCAACATTCGCTTTGGTATCCCCGTCGCGGAAAATGACATGGTTTCATTGGGACTGGGTTATGAACACA
CCAAAATTGATTTGCGCAATGACAGCCCGCAACGTTTCAGGGATTTCGTCGATCAGTTTGGCAAGACTTCCAATAACCTC
CCGCTTACCTTGAGCTGGGCACGTGATCGTCGTGACAGTGCGATCTGGACAACCTCCGGATTGACGCAGCGATTATTTGG
CGAATTTGGTATGCCGTTCGGAGACCTGAATTACTACAAGGTCAGTTATGAGCAGAGATGGTTTTTTCCCGTTTCCAGGC
TATTTACCCTGATGCTGAATGGTGAAGTGGGAGTGGGCGATGGATATTCCGGTAAACCGCTACCTTTTTTCAAGAATTTT
TTTGCAGGCGGCTTTAATTCGGTTAGAGGGTACAACATCAATACGTTGGGGCCTCGTGACAATAATAATCTGGCTCTGGG
TGGCAGCAAACGTATAGTCGGTAACGTTGAGGTATTATTCCCGGTACCATTTATGAAGGATGACAAATCAGTTCGTCTGA
GTGCATTTGCCGATGGCGGTACAATTATTAATTCATTTTCCGGACTGGGATTTGATGATTTTCGTTACTCTGCCGGGTTG
GCTGCAACCTGGATTTCTCCCATGGGGCCGCTGAAGTTCAGTGTCGCCCAGCCACTTAATGATAAACCAGGCGACAAATT
GCAACGTTTCCAGTTCCAGTTTGGACAGACTTTCTGA

Upstream 100 bases:

>100_bases
GAGTAATGTATATCGGCAATCAGATTGGTATGGCTTTGCTAATTACACTGATGATGTTTGCAATATATAACGATCTACTT
CGCCTGGCTTCTGAATAGAC

Downstream 100 bases:

>100_bases
ATCTGAAAAATTGTATTAAAAGAAAATGAAAGATTCATTAAATAGATACAGCCAGATAACTGTTGTTCGGTTTGTAAAAA
TATTCATTTTTTTGGCAGTG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 758; Mature: 758

Protein sequence:

>758_residues
MKFRFYALFFFLYSIGCAANDSFVVKDIRVEGIQRTEAGTIFSYLPVKVGDVLDSKKASAAIKALYATGFFSDVKLKSEG
ELLIVQVQERPAIAQITINGAKEFDKDKLKEGLKQAGLSESRIFSRSLLEKAEQELKRQYISRGKYAVKITTTTTPLERN
RIGINFDIKEGKTARIKQINIVGNHVFPEDDLTGLFSLKTPGFMTWFTKDDQYSKQKLSADLETLRSYYLDRGYLEFNIE
STQVSITPDMKDIYITVNVTEGPQYTVSDIKLAGELLVPEEELRKLIKLEPGGVFVREKLTESIKLISDRLGNDGYAFAN
VNASPELDKETRKTAFTFFIDPGRRVYVRRINISGNERTRDEVIRREFRQMEGGWHSTEQINRSRQRVDRLDFFTSVNVE
TPPVADVPDQVDINVNVVEKPTGAIMFGAGYSDREGIILNGSIAQNNILGTGNFLSLQVNTGSVNKIISASFSNPYYTIN
GVSLGLEAFRRDINTRSLSRVGVFNTDTTGANIRFGIPVAENDMVSLGLGYEHTKIDLRNDSPQRFRDFVDQFGKTSNNL
PLTLSWARDRRDSAIWTTSGLTQRLFGEFGMPFGDLNYYKVSYEQRWFFPVSRLFTLMLNGEVGVGDGYSGKPLPFFKNF
FAGGFNSVRGYNINTLGPRDNNNLALGGSKRIVGNVEVLFPVPFMKDDKSVRLSAFADGGTIINSFSGLGFDDFRYSAGL
AATWISPMGPLKFSVAQPLNDKPGDKLQRFQFQFGQTF

Sequences:

>Translated_758_residues
MKFRFYALFFFLYSIGCAANDSFVVKDIRVEGIQRTEAGTIFSYLPVKVGDVLDSKKASAAIKALYATGFFSDVKLKSEG
ELLIVQVQERPAIAQITINGAKEFDKDKLKEGLKQAGLSESRIFSRSLLEKAEQELKRQYISRGKYAVKITTTTTPLERN
RIGINFDIKEGKTARIKQINIVGNHVFPEDDLTGLFSLKTPGFMTWFTKDDQYSKQKLSADLETLRSYYLDRGYLEFNIE
STQVSITPDMKDIYITVNVTEGPQYTVSDIKLAGELLVPEEELRKLIKLEPGGVFVREKLTESIKLISDRLGNDGYAFAN
VNASPELDKETRKTAFTFFIDPGRRVYVRRINISGNERTRDEVIRREFRQMEGGWHSTEQINRSRQRVDRLDFFTSVNVE
TPPVADVPDQVDINVNVVEKPTGAIMFGAGYSDREGIILNGSIAQNNILGTGNFLSLQVNTGSVNKIISASFSNPYYTIN
GVSLGLEAFRRDINTRSLSRVGVFNTDTTGANIRFGIPVAENDMVSLGLGYEHTKIDLRNDSPQRFRDFVDQFGKTSNNL
PLTLSWARDRRDSAIWTTSGLTQRLFGEFGMPFGDLNYYKVSYEQRWFFPVSRLFTLMLNGEVGVGDGYSGKPLPFFKNF
FAGGFNSVRGYNINTLGPRDNNNLALGGSKRIVGNVEVLFPVPFMKDDKSVRLSAFADGGTIINSFSGLGFDDFRYSAGL
AATWISPMGPLKFSVAQPLNDKPGDKLQRFQFQFGQTF
>Mature_758_residues
MKFRFYALFFFLYSIGCAANDSFVVKDIRVEGIQRTEAGTIFSYLPVKVGDVLDSKKASAAIKALYATGFFSDVKLKSEG
ELLIVQVQERPAIAQITINGAKEFDKDKLKEGLKQAGLSESRIFSRSLLEKAEQELKRQYISRGKYAVKITTTTTPLERN
RIGINFDIKEGKTARIKQINIVGNHVFPEDDLTGLFSLKTPGFMTWFTKDDQYSKQKLSADLETLRSYYLDRGYLEFNIE
STQVSITPDMKDIYITVNVTEGPQYTVSDIKLAGELLVPEEELRKLIKLEPGGVFVREKLTESIKLISDRLGNDGYAFAN
VNASPELDKETRKTAFTFFIDPGRRVYVRRINISGNERTRDEVIRREFRQMEGGWHSTEQINRSRQRVDRLDFFTSVNVE
TPPVADVPDQVDINVNVVEKPTGAIMFGAGYSDREGIILNGSIAQNNILGTGNFLSLQVNTGSVNKIISASFSNPYYTIN
GVSLGLEAFRRDINTRSLSRVGVFNTDTTGANIRFGIPVAENDMVSLGLGYEHTKIDLRNDSPQRFRDFVDQFGKTSNNL
PLTLSWARDRRDSAIWTTSGLTQRLFGEFGMPFGDLNYYKVSYEQRWFFPVSRLFTLMLNGEVGVGDGYSGKPLPFFKNF
FAGGFNSVRGYNINTLGPRDNNNLALGGSKRIVGNVEVLFPVPFMKDDKSVRLSAFADGGTIINSFSGLGFDDFRYSAGL
AATWISPMGPLKFSVAQPLNDKPGDKLQRFQFQFGQTF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=794, Percent_Identity=36.7758186397985, Blast_Score=513, Evalue=1e-146,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 85099; Mature: 85099

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRFYALFFFLYSIGCAANDSFVVKDIRVEGIQRTEAGTIFSYLPVKVGDVLDSKKASA
CCEEHHHHHHHHHHHCCCCCCCEEEEEEEECCEEECCCCCEEEECCCHHHHHHCCHHHHH
AIKALYATGFFSDVKLKSEGELLIVQVQERPAIAQITINGAKEFDKDKLKEGLKQAGLSE
HHHHHHHHCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCHHCCHHHHHHHHHHCCCCH
SRIFSRSLLEKAEQELKRQYISRGKYAVKITTTTTPLERNRIGINFDIKEGKTARIKQIN
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEE
IVGNHVFPEDDLTGLFSLKTPGFMTWFTKDDQYSKQKLSADLETLRSYYLDRGYLEFNIE
EEECCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
STQVSITPDMKDIYITVNVTEGPQYTVSDIKLAGELLVPEEELRKLIKLEPGGVFVREKL
CEEEEECCCCCEEEEEEEECCCCCEEHHHHEECCEEECCHHHHHHHHEECCCCEEHHHHH
TESIKLISDRLGNDGYAFANVNASPELDKETRKTAFTFFIDPGRRVYVRRINISGNERTR
HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCEEEEEEECCCCEEEEEEEECCCCCCHH
DEVIRREFRQMEGGWHSTEQINRSRQRVDRLDFFTSVNVETPPVADVPDQVDINVNVVEK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEEEC
PTGAIMFGAGYSDREGIILNGSIAQNNILGTGNFLSLQVNTGSVNKIISASFSNPYYTIN
CCCEEEEECCCCCCCCEEEECCCCCCCEEECCCEEEEEECCCCCCCEEEECCCCCEEEEE
GVSLGLEAFRRDINTRSLSRVGVFNTDTTGANIRFGIPVAENDMVSLGLGYEHTKIDLRN
CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEECCCEEEEEEECC
DSPQRFRDFVDQFGKTSNNLPLTLSWARDRRDSAIWTTSGLTQRLFGEFGMPFGDLNYYK
CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHCCCCCCCEEEE
VSYEQRWFFPVSRLFTLMLNGEVGVGDGYSGKPLPFFKNFFAGGFNSVRGYNINTLGPRD
EEECCEEEEEHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCC
NNNLALGGSKRIVGNVEVLFPVPFMKDDKSVRLSAFADGGTIINSFSGLGFDDFRYSAGL
CCCEEECCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHCCCC
AATWISPMGPLKFSVAQPLNDKPGDKLQRFQFQFGQTF
CEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFRFYALFFFLYSIGCAANDSFVVKDIRVEGIQRTEAGTIFSYLPVKVGDVLDSKKASA
CCEEHHHHHHHHHHHCCCCCCCEEEEEEEECCEEECCCCCEEEECCCHHHHHHCCHHHHH
AIKALYATGFFSDVKLKSEGELLIVQVQERPAIAQITINGAKEFDKDKLKEGLKQAGLSE
HHHHHHHHCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCHHCCHHHHHHHHHHCCCCH
SRIFSRSLLEKAEQELKRQYISRGKYAVKITTTTTPLERNRIGINFDIKEGKTARIKQIN
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEE
IVGNHVFPEDDLTGLFSLKTPGFMTWFTKDDQYSKQKLSADLETLRSYYLDRGYLEFNIE
EEECCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
STQVSITPDMKDIYITVNVTEGPQYTVSDIKLAGELLVPEEELRKLIKLEPGGVFVREKL
CEEEEECCCCCEEEEEEEECCCCCEEHHHHEECCEEECCHHHHHHHHEECCCCEEHHHHH
TESIKLISDRLGNDGYAFANVNASPELDKETRKTAFTFFIDPGRRVYVRRINISGNERTR
HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCEEEEEEECCCCEEEEEEEECCCCCCHH
DEVIRREFRQMEGGWHSTEQINRSRQRVDRLDFFTSVNVETPPVADVPDQVDINVNVVEK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEEEC
PTGAIMFGAGYSDREGIILNGSIAQNNILGTGNFLSLQVNTGSVNKIISASFSNPYYTIN
CCCEEEEECCCCCCCCEEEECCCCCCCEEECCCEEEEEECCCCCCCEEEECCCCCEEEEE
GVSLGLEAFRRDINTRSLSRVGVFNTDTTGANIRFGIPVAENDMVSLGLGYEHTKIDLRN
CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEECCCEEEEEEECC
DSPQRFRDFVDQFGKTSNNLPLTLSWARDRRDSAIWTTSGLTQRLFGEFGMPFGDLNYYK
CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHCCCCCCCEEEE
VSYEQRWFFPVSRLFTLMLNGEVGVGDGYSGKPLPFFKNFFAGGFNSVRGYNINTLGPRD
EEECCEEEEEHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCC
NNNLALGGSKRIVGNVEVLFPVPFMKDDKSVRLSAFADGGTIINSFSGLGFDDFRYSAGL
CCCEEECCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHCCCC
AATWISPMGPLKFSVAQPLNDKPGDKLQRFQFQFGQTF
CEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]