Click here to switch to the map view.

The map label for this gene is hlpA [C]

Identifier: 114331992

GI number: 114331992

Start: 2140821

End: 2141384

Strand: Reverse

Name: hlpA [C]

Synonym: Neut_2026

Alternate gene names: 114331992

Gene position: 2141384-2140821 (Counterclockwise)

Preceding gene: 114331993

Following gene: 114331991

Centisome position: 80.47

GC content: 45.57

Gene sequence:

>564_bases
ATGAAAGATTCATTAAATAGATACAGCCAGATAACTGTTGTTCGGTTTGTAAAAATATTCATTTTTTTGGCAGTGCTGAT
TTTGTCACCTTATCTGTTTGCTGGGGAGATCAAGATCGGCGTTGTCAATACCGAGAGAGTGCTGCGGGAATCAATGCCCG
CCGTAGCCGCACAGAAAAAGATAGAAAATGAATTTCAGGCACGTGATGCACGTATCAGGGAGCTTTCCGTGCAGATCAGA
GCTTTACAGCAGGAGCTGGAAAAAAATATTGACTTTGTCAATGAAGAGGAACGGCGCTTGAAGGAGCGGGAACTGGCTGG
ACTCAGCCGACGTTACCAACGTACACAGCAGCAGATGCGGGAAGATTTGAGTTTGCGCCAAAATGAAGAGTACAGCCTGA
TTCTGGAACGTACCAACAAGGTGATCAAAGAACTCGCGGAGCAACAGGATTATGATCTGATCCTGCAGCTGCAAGATTCA
GTCTACCGAAGTGCGCGTATTGATATTACTGACCAGGTGATCAAGGCATTAAACGCACAGGAACCGACTTCCAGGAAACA
ATAA

Upstream 100 bases:

>100_bases
GTCGCCCAGCCACTTAATGATAAACCAGGCGACAAATTGCAACGTTTCCAGTTCCAGTTTGGACAGACTTTCTGAATCTG
AAAAATTGTATTAAAAGAAA

Downstream 100 bases:

>100_bases
ATATATAAAAATTTGTATAACAGAGAGATAGAATGGCTGTGATGGATATCCATGAAATACTGAAATACTTGCCGCATCGT
TATCCACTGATTCTGGTTGA

Product: outer membrane chaperone Skp (OmpH)

Products: NA

Alternate protein names: Outer Membrane Protein; Transmembrane Protein; Outer Membrane Protein OmpH Family Protein; OmpH/HlpA Family Outer Membrane Protein; Outer Membrane Protein OmpH; Outer Membrane Protein OmpH Family; Outer Membrane Chaperone OmpH; Chaperone For Outer Membrane Protein; Periplasmic Molecular Chaperone For Outer Membrane Proteins

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKDSLNRYSQITVVRFVKIFIFLAVLILSPYLFAGEIKIGVVNTERVLRESMPAVAAQKKIENEFQARDARIRELSVQIR
ALQQELEKNIDFVNEEERRLKERELAGLSRRYQRTQQQMREDLSLRQNEEYSLILERTNKVIKELAEQQDYDLILQLQDS
VYRSARIDITDQVIKALNAQEPTSRKQ

Sequences:

>Translated_187_residues
MKDSLNRYSQITVVRFVKIFIFLAVLILSPYLFAGEIKIGVVNTERVLRESMPAVAAQKKIENEFQARDARIRELSVQIR
ALQQELEKNIDFVNEEERRLKERELAGLSRRYQRTQQQMREDLSLRQNEEYSLILERTNKVIKELAEQQDYDLILQLQDS
VYRSARIDITDQVIKALNAQEPTSRKQ
>Mature_187_residues
MKDSLNRYSQITVVRFVKIFIFLAVLILSPYLFAGEIKIGVVNTERVLRESMPAVAAQKKIENEFQARDARIRELSVQIR
ALQQELEKNIDFVNEEERRLKERELAGLSRRYQRTQQQMREDLSLRQNEEYSLILERTNKVIKELAEQQDYDLILQLQDS
VYRSARIDITDQVIKALNAQEPTSRKQ

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Either In The Nucleoid (Chromatin) Or In The Outer Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22072; Mature: 22072

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSLNRYSQITVVRFVKIFIFLAVLILSPYLFAGEIKIGVVNTERVLRESMPAVAAQKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECHHHHHHHHHHHHHHHHH
IENEFQARDARIRELSVQIRALQQELEKNIDFVNEEERRLKERELAGLSRRYQRTQQQMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDLSLRQNEEYSLILERTNKVIKELAEQQDYDLILQLQDSVYRSARIDITDQVIKALNAQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
EPTSRKQ
CCCCCCC
>Mature Secondary Structure
MKDSLNRYSQITVVRFVKIFIFLAVLILSPYLFAGEIKIGVVNTERVLRESMPAVAAQKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECHHHHHHHHHHHHHHHHH
IENEFQARDARIRELSVQIRALQQELEKNIDFVNEEERRLKERELAGLSRRYQRTQQQMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDLSLRQNEEYSLILERTNKVIKELAEQQDYDLILQLQDSVYRSARIDITDQVIKALNAQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
EPTSRKQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA