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The map label for this gene is tcp [H]

Identifier: 114331167

GI number: 114331167

Start: 1217383

End: 1219638

Strand: Direct

Name: tcp [H]

Synonym: Neut_1169

Alternate gene names: 114331167

Gene position: 1217383-1219638 (Clockwise)

Preceding gene: 114331166

Following gene: 114331168

Centisome position: 45.75

GC content: 50.8

Gene sequence:

>2256_bases
ATGTTGCAGAACATGACGATTAAATCACGGCTGATTTTTGTGATTGGCCTGCTGTCTCTGTTGCTGATCAGTGTGGGGGC
AGTCGGGCTGTATGGCTTAAATCAATCCAAAGCACAGCTGGAAACGATTTATCAGGACCGGGTGGTGGTGCTTGGTCATT
TTTCAGAAATCCTGGACAAACTGCAACAAGTACGTATGCATGCGTTACTGGCTGGCAACTCGCGTGATACTGCTGTTGCC
AGGCAACGAGCAGGACAGGTGATTGAAGAAGATTCCGGCATCAGTGATCTCTGGCAAAAATTCAGCCAGACCTATCTGAT
TCCGGAAGAACAATCGCTGGCCAATCGCTTCACCGAGCAATGGAGGGCTTATCAGGCTGCACGCAATCAGACGCTTAATC
ATGCTGTTAATGGTAATTTTGATGCGGCAATGGAGAATACCCTTCAGGACGCCGGCCCCAAATATGAATCAGTGCACGAC
ACACTGATGCAGTTAATCGAGCTGCAGGAAAATGTCACCGCGCAGGAGTATGAACAGCTGCAGGCGAATTCTTCCAAAAT
GATTATGACCATGTTCCTGCTGGCGACACTGGGAATCCTGTTAGCCGGCGTAATCGGTTTTGTGCTGATTCGTACTATCA
GCCGTTCTATCGATCAGGCCGTGCAAGTAGCAGATGGTATTGCCAACGGTCATCTGGATCAGCATATCGAAGTGACCGGC
CATGATGAAATTTCCGTGTTGCTGAAATCGATGCGCAAGATGGTGGAAGTACTGAATAGCTTTGTAGCTGCTCAGCAAAA
AATGCAACAACAGCATGAAGCCGGTGCAATTAGCTACCGGATTCCTGCCGGTAAATTTCCGGGTAGCTACGGTGAAATTG
CCAGTGCAGTCAATGATCTGGTGGCGGGACATATTGCCGTCAAGATGCGAGTGGTGGAAGTTGTTTCACGTTACGCGCAG
GGTGATCTGTCAGTAGATATGGATCGATTACCTGGTGAAAAGGCAAAAGTGACTGAGGCGGTAGACAAGGTTAAAGCCAG
CCTGCAAGCGGTTAATATCGAAATCAGGAATCTGGTGGAAGGTGCAGTGGCAGGTGATTTCTCCCGTCGTGGCCATGCAG
ATAAATATCAATATGAGTTCCAGAGCATGGTGAACAATCTGAACCGGTTGATGCAGACTTGTGAAACCAGCCTGGAGGAC
GTTATTCGGATTATGGATGCCCTGGCAGATGGCGATCTGACCCAGAAAATTACCCGTGAGTACCAGGGTATGTTCGCTCG
CATGAAGGATGATTCGAATGTCACCGTGGGACAGTTGGCAAGCATTGTCAGGCAGATCAAGGAAGCCGCCGGACTGATCA
CCACCGCTTCGAAAGAGATTGCTGACGGTAACACGGATCTTTCGCAGCGTACTGAAGAGCAGGCCGCCAATCTGGAAGAA
ACTGCCGCCAGCATGGAAGAGTTGACCTCAACCGTCAGGCAGAATGCGGACAATGCTCGCCAGGCTAACCAGCTCGCTGC
TTCTGCATCGGATGTGGCAATGAAGGGAGGCAAAGTTGTTGGTGAAGTGGTGCAGACCATGAGTGCGATTAACGATAGTT
CCAAGAAGATTGTCGACATTATTAGCGTGATCGACGGCATTGCTTTTCAGACTAATATTCTGGCGCTGAATGCAGCGGTG
GAAGCCGCCCGTGCCGGCGAACAGGGACGCGGATTTGCGGTAGTCGCGACCGAAGTGCGCACACTGGCACAGCGCTCAGC
AGCGGCTGCCAGGGAAATCAAGGATCTGATCAGTAATTCGGTGCACAAGGTTGAGGATGGTACCCAACTGGTGGATCAGG
CTGGTAAAACAATGGAAGAAGTGGTGCTGTCAGTTAAGCGTGTAACTGACATCATGGGTGAAATTTCGGCCGCTTCCCAG
GAACAGAGCCAGGGGATCGAACAAGTGAATCAGGCGATTACACAGATGGATGAAATCACCCAGCAAAATGCCGCACTGGT
GGAACAGGCAGCAGCAGCTTCTGAATCCATGCGTGAGCAGGCAGAGCAATTATCACGTGCTGTGGCTGTATTCAAACTGG
AGCAGGGATTTTCATCCAGTCATGCAGGTAATGCCCCATTGACTGAGCGACGCAGCCCGAACCGGGCAACTAACGTTGAG
CGGTTACCACAAGCCAAAAATCAGCGAAAAACGGCTACTGCAAGTCCTGCCGCCCCAGCCTCAACTGGCACGGATGGTGA
TTGGGAAGAATTTTGA

Upstream 100 bases:

>100_bases
CGGCAGGCAAATAGCTTTGTGAATAGTCGCGTGTATTAGTGGCTATGGCGATGAGCACAGTATTTTAAAAGTTAAGTTAC
TTTATTTATCGGGAGCAAAA

Downstream 100 bases:

>100_bases
AATGGGGAACAAAACGTCTGTCTTTATAAACACAAAGGTGAGAAGCGACCTCTTCCTGCCGCATTGTATTCGCAGTCGTG
ATGACAGTGATGAATCTGTA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 751; Mature: 751

Protein sequence:

>751_residues
MLQNMTIKSRLIFVIGLLSLLLISVGAVGLYGLNQSKAQLETIYQDRVVVLGHFSEILDKLQQVRMHALLAGNSRDTAVA
RQRAGQVIEEDSGISDLWQKFSQTYLIPEEQSLANRFTEQWRAYQAARNQTLNHAVNGNFDAAMENTLQDAGPKYESVHD
TLMQLIELQENVTAQEYEQLQANSSKMIMTMFLLATLGILLAGVIGFVLIRTISRSIDQAVQVADGIANGHLDQHIEVTG
HDEISVLLKSMRKMVEVLNSFVAAQQKMQQQHEAGAISYRIPAGKFPGSYGEIASAVNDLVAGHIAVKMRVVEVVSRYAQ
GDLSVDMDRLPGEKAKVTEAVDKVKASLQAVNIEIRNLVEGAVAGDFSRRGHADKYQYEFQSMVNNLNRLMQTCETSLED
VIRIMDALADGDLTQKITREYQGMFARMKDDSNVTVGQLASIVRQIKEAAGLITTASKEIADGNTDLSQRTEEQAANLEE
TAASMEELTSTVRQNADNARQANQLAASASDVAMKGGKVVGEVVQTMSAINDSSKKIVDIISVIDGIAFQTNILALNAAV
EAARAGEQGRGFAVVATEVRTLAQRSAAAAREIKDLISNSVHKVEDGTQLVDQAGKTMEEVVLSVKRVTDIMGEISAASQ
EQSQGIEQVNQAITQMDEITQQNAALVEQAAAASESMREQAEQLSRAVAVFKLEQGFSSSHAGNAPLTERRSPNRATNVE
RLPQAKNQRKTATASPAAPASTGTDGDWEEF

Sequences:

>Translated_751_residues
MLQNMTIKSRLIFVIGLLSLLLISVGAVGLYGLNQSKAQLETIYQDRVVVLGHFSEILDKLQQVRMHALLAGNSRDTAVA
RQRAGQVIEEDSGISDLWQKFSQTYLIPEEQSLANRFTEQWRAYQAARNQTLNHAVNGNFDAAMENTLQDAGPKYESVHD
TLMQLIELQENVTAQEYEQLQANSSKMIMTMFLLATLGILLAGVIGFVLIRTISRSIDQAVQVADGIANGHLDQHIEVTG
HDEISVLLKSMRKMVEVLNSFVAAQQKMQQQHEAGAISYRIPAGKFPGSYGEIASAVNDLVAGHIAVKMRVVEVVSRYAQ
GDLSVDMDRLPGEKAKVTEAVDKVKASLQAVNIEIRNLVEGAVAGDFSRRGHADKYQYEFQSMVNNLNRLMQTCETSLED
VIRIMDALADGDLTQKITREYQGMFARMKDDSNVTVGQLASIVRQIKEAAGLITTASKEIADGNTDLSQRTEEQAANLEE
TAASMEELTSTVRQNADNARQANQLAASASDVAMKGGKVVGEVVQTMSAINDSSKKIVDIISVIDGIAFQTNILALNAAV
EAARAGEQGRGFAVVATEVRTLAQRSAAAAREIKDLISNSVHKVEDGTQLVDQAGKTMEEVVLSVKRVTDIMGEISAASQ
EQSQGIEQVNQAITQMDEITQQNAALVEQAAAASESMREQAEQLSRAVAVFKLEQGFSSSHAGNAPLTERRSPNRATNVE
RLPQAKNQRKTATASPAAPASTGTDGDWEEF
>Mature_751_residues
MLQNMTIKSRLIFVIGLLSLLLISVGAVGLYGLNQSKAQLETIYQDRVVVLGHFSEILDKLQQVRMHALLAGNSRDTAVA
RQRAGQVIEEDSGISDLWQKFSQTYLIPEEQSLANRFTEQWRAYQAARNQTLNHAVNGNFDAAMENTLQDAGPKYESVHD
TLMQLIELQENVTAQEYEQLQANSSKMIMTMFLLATLGILLAGVIGFVLIRTISRSIDQAVQVADGIANGHLDQHIEVTG
HDEISVLLKSMRKMVEVLNSFVAAQQKMQQQHEAGAISYRIPAGKFPGSYGEIASAVNDLVAGHIAVKMRVVEVVSRYAQ
GDLSVDMDRLPGEKAKVTEAVDKVKASLQAVNIEIRNLVEGAVAGDFSRRGHADKYQYEFQSMVNNLNRLMQTCETSLED
VIRIMDALADGDLTQKITREYQGMFARMKDDSNVTVGQLASIVRQIKEAAGLITTASKEIADGNTDLSQRTEEQAANLEE
TAASMEELTSTVRQNADNARQANQLAASASDVAMKGGKVVGEVVQTMSAINDSSKKIVDIISVIDGIAFQTNILALNAAV
EAARAGEQGRGFAVVATEVRTLAQRSAAAAREIKDLISNSVHKVEDGTQLVDQAGKTMEEVVLSVKRVTDIMGEISAASQ
EQSQGIEQVNQAITQMDEITQQNAALVEQAAAASESMREQAEQLSRAVAVFKLEQGFSSSHAGNAPLTERRSPNRATNVE
RLPQAKNQRKTATASPAAPASTGTDGDWEEF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=357, Percent_Identity=52.3809523809524, Blast_Score=310, Evalue=3e-85,
Organism=Escherichia coli, GI2367378, Length=377, Percent_Identity=52.5198938992042, Blast_Score=306, Evalue=4e-84,
Organism=Escherichia coli, GI1788194, Length=302, Percent_Identity=56.2913907284768, Blast_Score=293, Evalue=4e-80,
Organism=Escherichia coli, GI1787690, Length=294, Percent_Identity=56.8027210884354, Blast_Score=284, Evalue=2e-77,
Organism=Escherichia coli, GI1789453, Length=260, Percent_Identity=43.8461538461538, Blast_Score=207, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 81679; Mature: 81679

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNMTIKSRLIFVIGLLSLLLISVGAVGLYGLNQSKAQLETIYQDRVVVLGHFSEILDK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
LQQVRMHALLAGNSRDTAVARQRAGQVIEEDSGISDLWQKFSQTYLIPEEQSLANRFTEQ
HHHHHHHHHHCCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
WRAYQAARNQTLNHAVNGNFDAAMENTLQDAGPKYESVHDTLMQLIELQENVTAQEYEQL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
QANSSKMIMTMFLLATLGILLAGVIGFVLIRTISRSIDQAVQVADGIANGHLDQHIEVTG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
HDEISVLLKSMRKMVEVLNSFVAAQQKMQQQHEAGAISYRIPAGKFPGSYGEIASAVNDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHH
VAGHIAVKMRVVEVVSRYAQGDLSVDMDRLPGEKAKVTEAVDKVKASLQAVNIEIRNLVE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVAGDFSRRGHADKYQYEFQSMVNNLNRLMQTCETSLEDVIRIMDALADGDLTQKITRE
HHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YQGMFARMKDDSNVTVGQLASIVRQIKEAAGLITTASKEIADGNTDLSQRTEEQAANLEE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHH
TAASMEELTSTVRQNADNARQANQLAASASDVAMKGGKVVGEVVQTMSAINDSSKKIVDI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRTLAQRSAAAAREIKDLISNS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VHKVEDGTQLVDQAGKTMEEVVLSVKRVTDIMGEISAASQEQSQGIEQVNQAITQMDEIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQNAALVEQAAAASESMREQAEQLSRAVAVFKLEQGFSSSHAGNAPLTERRSPNRATNVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
RLPQAKNQRKTATASPAAPASTGTDGDWEEF
HCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLQNMTIKSRLIFVIGLLSLLLISVGAVGLYGLNQSKAQLETIYQDRVVVLGHFSEILDK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
LQQVRMHALLAGNSRDTAVARQRAGQVIEEDSGISDLWQKFSQTYLIPEEQSLANRFTEQ
HHHHHHHHHHCCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
WRAYQAARNQTLNHAVNGNFDAAMENTLQDAGPKYESVHDTLMQLIELQENVTAQEYEQL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
QANSSKMIMTMFLLATLGILLAGVIGFVLIRTISRSIDQAVQVADGIANGHLDQHIEVTG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
HDEISVLLKSMRKMVEVLNSFVAAQQKMQQQHEAGAISYRIPAGKFPGSYGEIASAVNDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHH
VAGHIAVKMRVVEVVSRYAQGDLSVDMDRLPGEKAKVTEAVDKVKASLQAVNIEIRNLVE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAVAGDFSRRGHADKYQYEFQSMVNNLNRLMQTCETSLEDVIRIMDALADGDLTQKITRE
HHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YQGMFARMKDDSNVTVGQLASIVRQIKEAAGLITTASKEIADGNTDLSQRTEEQAANLEE
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHH
TAASMEELTSTVRQNADNARQANQLAASASDVAMKGGKVVGEVVQTMSAINDSSKKIVDI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRTLAQRSAAAAREIKDLISNS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VHKVEDGTQLVDQAGKTMEEVVLSVKRVTDIMGEISAASQEQSQGIEQVNQAITQMDEIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQNAALVEQAAAASESMREQAEQLSRAVAVFKLEQGFSSSHAGNAPLTERRSPNRATNVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
RLPQAKNQRKTATASPAAPASTGTDGDWEEF
HCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]