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The map label for this gene is 114330792

Identifier: 114330792

GI number: 114330792

Start: 797661

End: 798848

Strand: Direct

Name: 114330792

Synonym: Neut_0779

Alternate gene names: NA

Gene position: 797661-798848 (Clockwise)

Preceding gene: 114330791

Following gene: 114330796

Centisome position: 29.98

GC content: 45.96

Gene sequence:

>1188_bases
ATGGATATCGCATCGGTATTGTTAACTGGACTTATTGATCTGCCGTGGTGGGGATATATTATTGTGACACTGGTGTTTAC
CCACATAACGATTGCCAGTATTACTATCTTTTTGCATCGTCATCAGGCACATCGGGCATTGGATTTGCACCCCATACCTA
GCCATTTTTTCCGTTTCTGGCTGTGGTTATCGTCTGGGATGGTAACTAAGGAGTGGGCGGCAATCCATCGGAAGCATCAT
GCAAAATGTGAAACTGTGGATGATCCTCACAGTCCGCAAATTTTTGGGATTAGAAAGGTATTGAGTGAAGGAGCAGAGCT
CTACAAGATCGAGGCCAAAAATCAGGAAACACTTGATCGCTACGGGCATGGTACCCCGGATGATTGGATGGAGCGTAATG
TGTATTCCAAACATAGTGTGGCAGGTATCGCATTAATGCTAATCATCAATGTGGTATTGTTCGGTCCGATCGGTTTATCG
ATCTGGGCTGTACAAATGATGTGGACACCGGTATTTGCAGCGGGTGTCATCAACGGCATTGGCCACTACTGGGGTTATCG
CAATTTCCGTCCTGGGGATGCGAGTCGCAATATTAGCCCATGGGGGATATTGATTGGTGGGGAAGAGTTGCATAATAATC
ACCATGCCTACCCAACCTCTGCCAGATTGTCCAACAAGTGGTATGAGTTTGATATCGGTTGGATGTATATCCGCATACTG
GAAATGATGGGATTGGCGAAGGTGAAAAAAACAGCTCCCAAGCTGCAACTTAATAAAGCCAAAACCCAGTGTGATCTGGA
GACATTGCAGGCGGTTATTTCCCATCGATATGAGGTGTTAGCGAAATATACCAAATCATTGAAAATTGCATTCAAGAATG
AGCTGTCATCTTTACAGCAAGCAGCGGTTGAGCTTGGTGTAGATGGCTCAACTCTGAAAAACTGGATACTGGCTGATGCG
AAAACCTTGAAGGAAGAGGAACGTACCAAGCTGGATCAGGTGTTGAGCCATACTCAGAAGCTGGATACGCTTTATCGTAT
GAGAGAAGAGCTGTCTGCGATATGGGAACGGTCAGCGGCAACCAAGGATGAGTTGCTCAAGCAACTTGAAGACTGGTGTC
GGCGCGCAGAAGAAAGTGGTATTGAGCTGCTGGAGAATTTTTCACGCAGACTAAGATGCTATGCATAA

Upstream 100 bases:

>100_bases
TTTCGAGAATCTTATGAAATTTCTTGACTAATAAGTAGCATCTATTTAGATTGAGCTGTTATAGAATAATTTATGATTAC
AAAGGAGAACATTTACAGAT

Downstream 100 bases:

>100_bases
TACTTTCTTTCTGCTTCGGAAGGATGTAAGTTAAGCAATAAAAAACCCGCTAAAAGCGGGTTTTTTATTGCTGGTAATAA
TTTATTTTAGTTTTGTTTCT

Product: fatty acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta-9 Acyl-Lipid Desaturase; Acyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Domain Protein; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MDIASVLLTGLIDLPWWGYIIVTLVFTHITIASITIFLHRHQAHRALDLHPIPSHFFRFWLWLSSGMVTKEWAAIHRKHH
AKCETVDDPHSPQIFGIRKVLSEGAELYKIEAKNQETLDRYGHGTPDDWMERNVYSKHSVAGIALMLIINVVLFGPIGLS
IWAVQMMWTPVFAAGVINGIGHYWGYRNFRPGDASRNISPWGILIGGEELHNNHHAYPTSARLSNKWYEFDIGWMYIRIL
EMMGLAKVKKTAPKLQLNKAKTQCDLETLQAVISHRYEVLAKYTKSLKIAFKNELSSLQQAAVELGVDGSTLKNWILADA
KTLKEEERTKLDQVLSHTQKLDTLYRMREELSAIWERSAATKDELLKQLEDWCRRAEESGIELLENFSRRLRCYA

Sequences:

>Translated_395_residues
MDIASVLLTGLIDLPWWGYIIVTLVFTHITIASITIFLHRHQAHRALDLHPIPSHFFRFWLWLSSGMVTKEWAAIHRKHH
AKCETVDDPHSPQIFGIRKVLSEGAELYKIEAKNQETLDRYGHGTPDDWMERNVYSKHSVAGIALMLIINVVLFGPIGLS
IWAVQMMWTPVFAAGVINGIGHYWGYRNFRPGDASRNISPWGILIGGEELHNNHHAYPTSARLSNKWYEFDIGWMYIRIL
EMMGLAKVKKTAPKLQLNKAKTQCDLETLQAVISHRYEVLAKYTKSLKIAFKNELSSLQQAAVELGVDGSTLKNWILADA
KTLKEEERTKLDQVLSHTQKLDTLYRMREELSAIWERSAATKDELLKQLEDWCRRAEESGIELLENFSRRLRCYA
>Mature_395_residues
MDIASVLLTGLIDLPWWGYIIVTLVFTHITIASITIFLHRHQAHRALDLHPIPSHFFRFWLWLSSGMVTKEWAAIHRKHH
AKCETVDDPHSPQIFGIRKVLSEGAELYKIEAKNQETLDRYGHGTPDDWMERNVYSKHSVAGIALMLIINVVLFGPIGLS
IWAVQMMWTPVFAAGVINGIGHYWGYRNFRPGDASRNISPWGILIGGEELHNNHHAYPTSARLSNKWYEFDIGWMYIRIL
EMMGLAKVKKTAPKLQLNKAKTQCDLETLQAVISHRYEVLAKYTKSLKIAFKNELSSLQQAAVELGVDGSTLKNWILADA
KTLKEEERTKLDQVLSHTQKLDTLYRMREELSAIWERSAATKDELLKQLEDWCRRAEESGIELLENFSRRLRCYA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45445; Mature: 45445

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIASVLLTGLIDLPWWGYIIVTLVFTHITIASITIFLHRHQAHRALDLHPIPSHFFRFW
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LWLSSGMVTKEWAAIHRKHHAKCETVDDPHSPQIFGIRKVLSEGAELYKIEAKNQETLDR
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHH
YGHGTPDDWMERNVYSKHSVAGIALMLIINVVLFGPIGLSIWAVQMMWTPVFAAGVINGI
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GHYWGYRNFRPGDASRNISPWGILIGGEELHNNHHAYPTSARLSNKWYEFDIGWMYIRIL
HHHCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCHHHCCCCEEECHHHHHHHHH
EMMGLAKVKKTAPKLQLNKAKTQCDLETLQAVISHRYEVLAKYTKSLKIAFKNELSSLQQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVELGVDGSTLKNWILADAKTLKEEERTKLDQVLSHTQKLDTLYRMREELSAIWERSAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TKDELLKQLEDWCRRAEESGIELLENFSRRLRCYA
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIASVLLTGLIDLPWWGYIIVTLVFTHITIASITIFLHRHQAHRALDLHPIPSHFFRFW
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LWLSSGMVTKEWAAIHRKHHAKCETVDDPHSPQIFGIRKVLSEGAELYKIEAKNQETLDR
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHH
YGHGTPDDWMERNVYSKHSVAGIALMLIINVVLFGPIGLSIWAVQMMWTPVFAAGVINGI
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GHYWGYRNFRPGDASRNISPWGILIGGEELHNNHHAYPTSARLSNKWYEFDIGWMYIRIL
HHHCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCHHHCCCCEEECHHHHHHHHH
EMMGLAKVKKTAPKLQLNKAKTQCDLETLQAVISHRYEVLAKYTKSLKIAFKNELSSLQQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVELGVDGSTLKNWILADAKTLKEEERTKLDQVLSHTQKLDTLYRMREELSAIWERSAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TKDELLKQLEDWCRRAEESGIELLENFSRRLRCYA
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA