| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is comA [H]
Identifier: 114330743
GI number: 114330743
Start: 741696
End: 744095
Strand: Direct
Name: comA [H]
Synonym: Neut_0728
Alternate gene names: 114330743
Gene position: 741696-744095 (Clockwise)
Preceding gene: 114330740
Following gene: 114330744
Centisome position: 27.87
GC content: 52.0
Gene sequence:
>2400_bases GTGTTGATCGGAATTTACAGTCTTGCATTTGTGTTCGGGGCCGTTTGGTTGTTGCAGCAGCCGGTTTTGCCCGAAATTTA TTGGGCGATTGGGCTGATTCCGATAGTGCTGGCAGCTTTAATTCTTTCCCGACTCCAATTTCGTTTTTCCGTGTTGGTAA GCAGGTTTCTATTGTTTGTTGTTATGCTGGGTGCCGGTTTTTTCTGGACAGCGTTATCGGCGCAGATGAGGCTGGCGGAC AGTCTGTCGCATGAATGGGAAGGAAAAGATATTGTGGTTACCGGTGTTGTTCCGGACATGCCGCAGTTTGCCCGGTACAG CATGCGCTTCCGGTTTGATGTGGAGCAAGTGCTGACACCGGATGCGGTAGTACCTGCCCGTATTCAGCTTTCCTGGTATC GGGATAACAAGCGTAAGGGGGTTGCTTTACCGCATATCACAGCAGGAGAGCGTTGGCGGTTAACCGTCCGGTTAAAGCGT CCGCATGGCAGCGCCAACCCGCATGTGCTGGATTATGAAGCCAGATTGCTTGAGCGTAACGTGCGCGCAACAGGTTATGT GCGAGCAGGGCAGGATAACGAGCGGCTTGAAGCATGGAACAGTGATCCGCACTACTTCTTTGAGCGTAAACGTGATGGAA TTCGTAGTCATTTTCAGCATTATCTGGCCGAATATCCGTATGCAGGGGTGCTGATCGCGCTGGTGGTGGGTGATCAACGT GCTATTCCGTCGGAGCAGTGGGAGATTTTTACCCGAACCGGCACCAGTCATCTCATGGCAATTTCCGGTTCGCATATTAC GCTGGTGGCCGGGCTGGTGTTTTTGCTGGCTTATTGGGTATGGCGTCGTGTTGGTCTTGCATTGTGGTTGCCTGCCCGCA AGTTTGCGCTGATGTGCGGGTTGATCGTTGCCATCGGTTATGCATTACTGGCTGGTTTTGCTGTGCCCGTGAAGCGTGCG TTATTCATGATGATCATCATCGTGGTGGCGTTCTGGGGTAACCAGCGCGTGCGTACACTGCCTGTGTTGGGGTGGGTGTT ATTGCTGGTTGTGGTACTTGATCCGTGGTCGGTCATTGCACCAGGTTTCTGGTTGTCGTTTGCAGCAGTGGCGTTAATTT GCCTGGTAGTATCCGGCCGGATTGGTCGATCAAGTGCAGTAACTGGCTGGGTGCGCATACAGTGGGCGATTACGCTTGGT TTATTTCCGCTACTGCTGATCCTGTTTCAGCAGATTTCATTGATATCACCCGTTGCCAATGCGGTGGCGATACCGGTGAT TACCCTTGTCATCGTGCCGCTGGCATTACTGGCTACCATTCCCGGGCTGGAATTTCTGCTGCTGGTTGCATATCCCTTTC TGCAAATTACGATGGCTGTGTTGCAGTGGCTGGGGGAGCTTCCTCTAGCCACCTGGCAACAGCATGCACCGCCTTTATGG GCGGTGATTGCAGCGACCATCGGGGTGAAATGGCTACTGCTGCCGGGCGGGCCAGGGCTGGGCGTATCAGCTGGTTTTCC TGCAAGATGGCTGGGTATACTGGCAGGATTGCCATTATTTCTAGTTTTTCCTGAAAAACCAGCTGCGGGAGAGCTCTGGC TAACTGTGCTGGATGTGGGGCAGGGGTTATCTGTAGTGTTACGTACTCGCAACCATACTCTACTTTACGATACCGGGCCA AAATATGGTGACAGTGATAGCGGGAAGTATGTGATTTTGCCATTCCTGCGTGGAGAGGGTATTCAGACGCTGGATAGGAT GATCGTTTCCCACGCGGATTCGGATCACAGTGGCGGGGCATTGTCGATATTGACGAGCGTAAAAACCGGAACGTTGCTGG CATCAATTGCGGCTGATCATCCGATACGGCAAGCTGTTCCTGATAATCGCTATTGTCTTGCAGGAGATTCGTGGTGGTGG GACGGAGTACATTTCGAAATCTTGCATCCGCTGGAACCGGAGTTTTTGCTACAGAAACGCAAGACCAATGAATCGAGTTG TGTACTCAAAGTAACAACGCCACATGGCAGTGTATTGTTGCCGGGAGATATTGGCCAGAAAACTGAGGCGAGTCTACTGC AATATGCTGGTACTTCGCTTGCTTCCAGCGTGTTGATTGTGCCGCATCATGGCAGCCGATCTTCATCTTCAGAAGCTTTT GTACGACAAGTTGATCCTGGCTATGCTATTTTTGCAGTGGGTTACCGAAGCCGGTTCGGGCACCCGCATCCGGAAATAAT AGAGCGCTATCAGGCGCAAGACAGCCAGCTACAGCGCAGTGATCATGATGGAGCGGTATTGTTGCGTTTTGTCCGGGGCA CTATAAAAGTTGATACCTGGAGAAAGCTTAATCGCCGTTTCTGGCATGACAAGTGGTCTGCAGCAGATGAGGCAGACTGA
Upstream 100 bases:
>100_bases CGATACCTGACGTTAACATCACCAATACTTTCACTTTTATTCATTAGGGGTATCTGGCTAACCGGGTTTTCCCGGATGGT CATTCTCTGGTATCAAATCA
Downstream 100 bases:
>100_bases GCATCATCCCTCGTAACAAGCGCCTGAAATTTACTACCCCTAGTTTGTAGGAAAAATTCCTACAAATTTTCAAGCCGAAT TCCTACGGTTGATATGGTAA
Product: DNA internalization-related competence protein ComEC/Rec2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 799; Mature: 799
Protein sequence:
>799_residues MLIGIYSLAFVFGAVWLLQQPVLPEIYWAIGLIPIVLAALILSRLQFRFSVLVSRFLLFVVMLGAGFFWTALSAQMRLAD SLSHEWEGKDIVVTGVVPDMPQFARYSMRFRFDVEQVLTPDAVVPARIQLSWYRDNKRKGVALPHITAGERWRLTVRLKR PHGSANPHVLDYEARLLERNVRATGYVRAGQDNERLEAWNSDPHYFFERKRDGIRSHFQHYLAEYPYAGVLIALVVGDQR AIPSEQWEIFTRTGTSHLMAISGSHITLVAGLVFLLAYWVWRRVGLALWLPARKFALMCGLIVAIGYALLAGFAVPVKRA LFMMIIIVVAFWGNQRVRTLPVLGWVLLLVVVLDPWSVIAPGFWLSFAAVALICLVVSGRIGRSSAVTGWVRIQWAITLG LFPLLLILFQQISLISPVANAVAIPVITLVIVPLALLATIPGLEFLLLVAYPFLQITMAVLQWLGELPLATWQQHAPPLW AVIAATIGVKWLLLPGGPGLGVSAGFPARWLGILAGLPLFLVFPEKPAAGELWLTVLDVGQGLSVVLRTRNHTLLYDTGP KYGDSDSGKYVILPFLRGEGIQTLDRMIVSHADSDHSGGALSILTSVKTGTLLASIAADHPIRQAVPDNRYCLAGDSWWW DGVHFEILHPLEPEFLLQKRKTNESSCVLKVTTPHGSVLLPGDIGQKTEASLLQYAGTSLASSVLIVPHHGSRSSSSEAF VRQVDPGYAIFAVGYRSRFGHPHPEIIERYQAQDSQLQRSDHDGAVLLRFVRGTIKVDTWRKLNRRFWHDKWSAADEAD
Sequences:
>Translated_799_residues MLIGIYSLAFVFGAVWLLQQPVLPEIYWAIGLIPIVLAALILSRLQFRFSVLVSRFLLFVVMLGAGFFWTALSAQMRLAD SLSHEWEGKDIVVTGVVPDMPQFARYSMRFRFDVEQVLTPDAVVPARIQLSWYRDNKRKGVALPHITAGERWRLTVRLKR PHGSANPHVLDYEARLLERNVRATGYVRAGQDNERLEAWNSDPHYFFERKRDGIRSHFQHYLAEYPYAGVLIALVVGDQR AIPSEQWEIFTRTGTSHLMAISGSHITLVAGLVFLLAYWVWRRVGLALWLPARKFALMCGLIVAIGYALLAGFAVPVKRA LFMMIIIVVAFWGNQRVRTLPVLGWVLLLVVVLDPWSVIAPGFWLSFAAVALICLVVSGRIGRSSAVTGWVRIQWAITLG LFPLLLILFQQISLISPVANAVAIPVITLVIVPLALLATIPGLEFLLLVAYPFLQITMAVLQWLGELPLATWQQHAPPLW AVIAATIGVKWLLLPGGPGLGVSAGFPARWLGILAGLPLFLVFPEKPAAGELWLTVLDVGQGLSVVLRTRNHTLLYDTGP KYGDSDSGKYVILPFLRGEGIQTLDRMIVSHADSDHSGGALSILTSVKTGTLLASIAADHPIRQAVPDNRYCLAGDSWWW DGVHFEILHPLEPEFLLQKRKTNESSCVLKVTTPHGSVLLPGDIGQKTEASLLQYAGTSLASSVLIVPHHGSRSSSSEAF VRQVDPGYAIFAVGYRSRFGHPHPEIIERYQAQDSQLQRSDHDGAVLLRFVRGTIKVDTWRKLNRRFWHDKWSAADEAD >Mature_799_residues MLIGIYSLAFVFGAVWLLQQPVLPEIYWAIGLIPIVLAALILSRLQFRFSVLVSRFLLFVVMLGAGFFWTALSAQMRLAD SLSHEWEGKDIVVTGVVPDMPQFARYSMRFRFDVEQVLTPDAVVPARIQLSWYRDNKRKGVALPHITAGERWRLTVRLKR PHGSANPHVLDYEARLLERNVRATGYVRAGQDNERLEAWNSDPHYFFERKRDGIRSHFQHYLAEYPYAGVLIALVVGDQR AIPSEQWEIFTRTGTSHLMAISGSHITLVAGLVFLLAYWVWRRVGLALWLPARKFALMCGLIVAIGYALLAGFAVPVKRA LFMMIIIVVAFWGNQRVRTLPVLGWVLLLVVVLDPWSVIAPGFWLSFAAVALICLVVSGRIGRSSAVTGWVRIQWAITLG LFPLLLILFQQISLISPVANAVAIPVITLVIVPLALLATIPGLEFLLLVAYPFLQITMAVLQWLGELPLATWQQHAPPLW AVIAATIGVKWLLLPGGPGLGVSAGFPARWLGILAGLPLFLVFPEKPAAGELWLTVLDVGQGLSVVLRTRNHTLLYDTGP KYGDSDSGKYVILPFLRGEGIQTLDRMIVSHADSDHSGGALSILTSVKTGTLLASIAADHPIRQAVPDNRYCLAGDSWWW DGVHFEILHPLEPEFLLQKRKTNESSCVLKVTTPHGSVLLPGDIGQKTEASLLQYAGTSLASSVLIVPHHGSRSSSSEAF VRQVDPGYAIFAVGYRSRFGHPHPEIIERYQAQDSQLQRSDHDGAVLLRFVRGTIKVDTWRKLNRRFWHDKWSAADEAD
Specific function: Essential for natural transformation. Could be a transporter involved in DNA uptake [H]
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ComEC, H.influenzae REC2, and E.coli YcaI [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=685, Percent_Identity=27.7372262773723, Blast_Score=216, Evalue=4e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 88879; Mature: 88879
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGIYSLAFVFGAVWLLQQPVLPEIYWAIGLIPIVLAALILSRLQFRFSVLVSRFLLFV CEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMLGAGFFWTALSAQMRLADSLSHEWEGKDIVVTGVVPDMPQFARYSMRFRFDVEQVLTP HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHEEEECHHHHCCC DAVVPARIQLSWYRDNKRKGVALPHITAGERWRLTVRLKRPHGSANPHVLDYEARLLERN CCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECHHHHHHHCC VRATGYVRAGQDNERLEAWNSDPHYFFERKRDGIRSHFQHYLAEYPYAGVLIALVVGDQR CCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCC AIPSEQWEIFTRTGTSHLMAISGSHITLVAGLVFLLAYWVWRRVGLALWLPARKFALMCG CCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHEECHHHHHHHHHH LIVAIGYALLAGFAVPVKRALFMMIIIVVAFWGNQRVRTLPVLGWVLLLVVVLDPWSVIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHHC PGFWLSFAAVALICLVVSGRIGRSSAVTGWVRIQWAITLGLFPLLLILFQQISLISPVAN CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH AVAIPVITLVIVPLALLATIPGLEFLLLVAYPFLQITMAVLQWLGELPLATWQQHAPPLW HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHH AVIAATIGVKWLLLPGGPGLGVSAGFPARWLGILAGLPLFLVFPEKPAAGELWLTVLDVG HHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHEEEEECCC QGLSVVLRTRNHTLLYDTGPKYGDSDSGKYVILPFLRGEGIQTLDRMIVSHADSDHSGGA CCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCC LSILTSVKTGTLLASIAADHPIRQAVPDNRYCLAGDSWWWDGVHFEILHPLEPEFLLQKR EEEEHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCEECCEEEEEECCCCHHHHHHHH KTNESSCVLKVTTPHGSVLLPGDIGQKTEASLLQYAGTSLASSVLIVPHHGSRSSSSEAF CCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHCHHHHCCEEEEECCCCCCCCCHHH VRQVDPGYAIFAVGYRSRFGHPHPEIIERYQAQDSQLQRSDHDGAVLLRFVRGTIKVDTW HHCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEHHH RKLNRRFWHDKWSAADEAD HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLIGIYSLAFVFGAVWLLQQPVLPEIYWAIGLIPIVLAALILSRLQFRFSVLVSRFLLFV CEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMLGAGFFWTALSAQMRLADSLSHEWEGKDIVVTGVVPDMPQFARYSMRFRFDVEQVLTP HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHEEEECHHHHCCC DAVVPARIQLSWYRDNKRKGVALPHITAGERWRLTVRLKRPHGSANPHVLDYEARLLERN CCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECHHHHHHHCC VRATGYVRAGQDNERLEAWNSDPHYFFERKRDGIRSHFQHYLAEYPYAGVLIALVVGDQR CCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCC AIPSEQWEIFTRTGTSHLMAISGSHITLVAGLVFLLAYWVWRRVGLALWLPARKFALMCG CCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHEECHHHHHHHHHH LIVAIGYALLAGFAVPVKRALFMMIIIVVAFWGNQRVRTLPVLGWVLLLVVVLDPWSVIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHHC PGFWLSFAAVALICLVVSGRIGRSSAVTGWVRIQWAITLGLFPLLLILFQQISLISPVAN CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH AVAIPVITLVIVPLALLATIPGLEFLLLVAYPFLQITMAVLQWLGELPLATWQQHAPPLW HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHH AVIAATIGVKWLLLPGGPGLGVSAGFPARWLGILAGLPLFLVFPEKPAAGELWLTVLDVG HHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHEEEEECCC QGLSVVLRTRNHTLLYDTGPKYGDSDSGKYVILPFLRGEGIQTLDRMIVSHADSDHSGGA CCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCC LSILTSVKTGTLLASIAADHPIRQAVPDNRYCLAGDSWWWDGVHFEILHPLEPEFLLQKR EEEEHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCEECCEEEEEECCCCHHHHHHHH KTNESSCVLKVTTPHGSVLLPGDIGQKTEASLLQYAGTSLASSVLIVPHHGSRSSSSEAF CCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHCHHHHCCEEEEECCCCCCCCCHHH VRQVDPGYAIFAVGYRSRFGHPHPEIIERYQAQDSQLQRSDHDGAVLLRFVRGTIKVDTW HHCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEHHH RKLNRRFWHDKWSAADEAD HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934834; 8830266 [H]