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The map label for this gene is ybgC [C]

Identifier: 114330312

GI number: 114330312

Start: 295730

End: 296143

Strand: Direct

Name: ybgC [C]

Synonym: Neut_0285

Alternate gene names: 114330312

Gene position: 295730-296143 (Clockwise)

Preceding gene: 114330311

Following gene: 114330313

Centisome position: 11.11

GC content: 45.65

Gene sequence:

>414_bases
ATGAAAGCTGCTTTTTTTTATCCCGTGCGTGTCTACTACCAGGATACTGATACGGGAGGCGTTGTATATCATGGATCTTA
CCTCAACTTCATGGAGCGCGCCCGTTACGAGTGGTTGCGCGATCTGGGGTTTACGGTGGATACCATGATCCGGTCACATA
AAATGATTTTTCTTATTCGTTCACTCAGTATCGAGTACTTCAAGCCGGCTGTACTAGACGATTTGCTGGACATAACTGTG
AAGGTAACAGAAATGGGCAGAAGCCGGATAACGTTGCAGCAGCAGATTTTACGTGAACAAGGTACACTTGCCAGCGCAAC
TGTTCATGCAGTATGTGTCGGATCGGATACGTTGAAACCGATTAGTATTCCAGTGCCACTTCGTCAAAAAATAGAAAACG
GCCATCATGAGTAA

Upstream 100 bases:

>100_bases
ACAGCAAGCCGCTACACCCGGTCTGTTTAACCCAGATTAAAAGCTAGTAATAACCCGCAAACCAAGATTCAATATCTTTC
TGAAGAGTATTTTTACAAAA

Downstream 100 bases:

>100_bases
AACCATCACCCAGGATTTATCATTTCTTCACCTGATTAGCGGTGCAAGCCTCCCGGTTCAACTGGTTATGCTGCTATTGT
TGTTGGCTTCATTTATTTCC

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKAAFFYPVRVYYQDTDTGGVVYHGSYLNFMERARYEWLRDLGFTVDTMIRSHKMIFLIRSLSIEYFKPAVLDDLLDITV
KVTEMGRSRITLQQQILREQGTLASATVHAVCVGSDTLKPISIPVPLRQKIENGHHE

Sequences:

>Translated_137_residues
MKAAFFYPVRVYYQDTDTGGVVYHGSYLNFMERARYEWLRDLGFTVDTMIRSHKMIFLIRSLSIEYFKPAVLDDLLDITV
KVTEMGRSRITLQQQILREQGTLASATVHAVCVGSDTLKPISIPVPLRQKIENGHHE
>Mature_137_residues
MKAAFFYPVRVYYQDTDTGGVVYHGSYLNFMERARYEWLRDLGFTVDTMIRSHKMIFLIRSLSIEYFKPAVLDDLLDITV
KVTEMGRSRITLQQQILREQGTLASATVHAVCVGSDTLKPISIPVPLRQKIENGHHE

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=121, Percent_Identity=42.9752066115703, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15766; Mature: 15766

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAFFYPVRVYYQDTDTGGVVYHGSYLNFMERARYEWLRDLGFTVDTMIRSHKMIFLIR
CCCEEEEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEE
SLSIEYFKPAVLDDLLDITVKVTEMGRSRITLQQQILREQGTLASATVHAVCVGSDTLKP
CCCHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCE
ISIPVPLRQKIENGHHE
EECCCCHHHHHCCCCCC
>Mature Secondary Structure
MKAAFFYPVRVYYQDTDTGGVVYHGSYLNFMERARYEWLRDLGFTVDTMIRSHKMIFLIR
CCCEEEEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEE
SLSIEYFKPAVLDDLLDITVKVTEMGRSRITLQQQILREQGTLASATVHAVCVGSDTLKP
CCCHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCE
ISIPVPLRQKIENGHHE
EECCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]