Click here to switch to the map view.

The map label for this gene is ccmC [H]

Identifier: 114330092

GI number: 114330092

Start: 61278

End: 62015

Strand: Reverse

Name: ccmC [H]

Synonym: Neut_0061

Alternate gene names: 114330092

Gene position: 62015-61278 (Counterclockwise)

Preceding gene: 114330093

Following gene: 114330091

Centisome position: 2.33

GC content: 55.01

Gene sequence:

>738_bases
ATGATTAATTGGTTTAAGTATTCATCGCCCAAAATGTTTTACCCCCTGGCCGGCAAGCTGATTCCATGGTTTGCCGTCGC
CGCCGCGATGCTGACGATCATAGGGATGTACGTGGGTTTCTTCATGGCGCCCACCGACGCCCAGCAAGGTGAGGGCTATC
GCATCATCTTCCTGCACGTGCCGGTCTCCTGGATGTCGATGTTCATTTATTTGGTCATGGCGTTCTGGGCTGCGATAGGG
CTGGCATTTAACAATCGTTTAGCCGCCATGATGGCCTCGGCCTTGGCCCCCACCGGCGCCATGTTCACGTTTCTTTCACT
CTGGACGGGCGCCTTGTGGGGCAAGCCCATGTGGGGGACCTGGTGGGTCTGGGATGCGCGCCTGACCTCCGAGCTGATTC
TTCTCTTTTTGTACATCGGTTTTATGGCGCTTCAGTCAGCGGTTGATGAGCCACGGCGCGCGGATAAGGCCGGTGCTGTC
CTTGCTCTCGTCGGCGTGGTCAATATTCCAATTATTTATTTTTCAGTGCAATGGTGGAACACCTTGCATCAAGGCGCATC
TGTTTCGCTGACACAAGCCCCCTCAATGGCGGCACTCATGCTAATTGGCATGCTGCTTATGGCCTTGGCGTCATGGATGT
ATACGGTGGCGATCGTGCTGATGCGCGTGCGCTGCATCATTCTGGAGCGCGAACAGCATGCCGGGTGGTTAGACGAATTG
AAGGAGGTAAAGCAATGA

Upstream 100 bases:

>100_bases
ATCTGTCGTTGCTCGGCGCCGTGCTGGTTTTAACGGCTTTTTTTGCACCGTGGGCCACAACCGTGGCATTACGGATTGCG
TTGGAATAATGAGTAAATGA

Downstream 100 bases:

>100_bases
ATTGGACGAGTCCCGCTGAATTTTTTGCCATGGGCGGCTATGGACAGTACGTATGGGGTTCATTCGGTGTCGCCCTGGTC
GTTCTGTGCGCCGAGTGGCT

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MINWFKYSSPKMFYPLAGKLIPWFAVAAAMLTIIGMYVGFFMAPTDAQQGEGYRIIFLHVPVSWMSMFIYLVMAFWAAIG
LAFNNRLAAMMASALAPTGAMFTFLSLWTGALWGKPMWGTWWVWDARLTSELILLFLYIGFMALQSAVDEPRRADKAGAV
LALVGVVNIPIIYFSVQWWNTLHQGASVSLTQAPSMAALMLIGMLLMALASWMYTVAIVLMRVRCIILEREQHAGWLDEL
KEVKQ

Sequences:

>Translated_245_residues
MINWFKYSSPKMFYPLAGKLIPWFAVAAAMLTIIGMYVGFFMAPTDAQQGEGYRIIFLHVPVSWMSMFIYLVMAFWAAIG
LAFNNRLAAMMASALAPTGAMFTFLSLWTGALWGKPMWGTWWVWDARLTSELILLFLYIGFMALQSAVDEPRRADKAGAV
LALVGVVNIPIIYFSVQWWNTLHQGASVSLTQAPSMAALMLIGMLLMALASWMYTVAIVLMRVRCIILEREQHAGWLDEL
KEVKQ
>Mature_245_residues
MINWFKYSSPKMFYPLAGKLIPWFAVAAAMLTIIGMYVGFFMAPTDAQQGEGYRIIFLHVPVSWMSMFIYLVMAFWAAIG
LAFNNRLAAMMASALAPTGAMFTFLSLWTGALWGKPMWGTWWVWDARLTSELILLFLYIGFMALQSAVDEPRRADKAGAV
LALVGVVNIPIIYFSVQWWNTLHQGASVSLTQAPSMAALMLIGMLLMALASWMYTVAIVLMRVRCIILEREQHAGWLDEL
KEVKQ

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=236, Percent_Identity=49.1525423728814, Blast_Score=214, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27596; Mature: 27596

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINWFKYSSPKMFYPLAGKLIPWFAVAAAMLTIIGMYVGFFMAPTDAQQGEGYRIIFLHV
CCCCEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
PVSWMSMFIYLVMAFWAAIGLAFNNRLAAMMASALAPTGAMFTFLSLWTGALWGKPMWGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCE
WWVWDARLTSELILLFLYIGFMALQSAVDEPRRADKAGAVLALVGVVNIPIIYFSVQWWN
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH
TLHQGASVSLTQAPSMAALMLIGMLLMALASWMYTVAIVLMRVRCIILEREQHAGWLDEL
HHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHH
KEVKQ
HHHCC
>Mature Secondary Structure
MINWFKYSSPKMFYPLAGKLIPWFAVAAAMLTIIGMYVGFFMAPTDAQQGEGYRIIFLHV
CCCCEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
PVSWMSMFIYLVMAFWAAIGLAFNNRLAAMMASALAPTGAMFTFLSLWTGALWGKPMWGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCE
WWVWDARLTSELILLFLYIGFMALQSAVDEPRRADKAGAVLALVGVVNIPIIYFSVQWWN
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH
TLHQGASVSLTQAPSMAALMLIGMLLMALASWMYTVAIVLMRVRCIILEREQHAGWLDEL
HHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHH
KEVKQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]