| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is yfcL [C]
Identifier: 113969761
GI number: 113969761
Start: 1656735
End: 1657016
Strand: Direct
Name: yfcL [C]
Synonym: Shewmr4_1419
Alternate gene names: 113969761
Gene position: 1656735-1657016 (Clockwise)
Preceding gene: 113969760
Following gene: 113969762
Centisome position: 35.2
GC content: 47.52
Gene sequence:
>282_bases ATGTTAGAGCAGTATGAAGAAGCACTAGAACAGTGGATAGAGTCTGTAGTAAGCCATGGTGATGACGACGCCTTATTTGC CTGTGGTTATCTGCAAGGGCATGTGGCGGTGGTGTTATCGCAACTCGAAGACGAAGGCGAGAGTACGCTAGAAGCCTTGC TCGAAAAAATGACCGACTGTTTAGCCCTCGCGCGCCAAGAATTAAATGATGCCGATTTTGCATTAGTGGAAGCGGCGTGG ACACAATTACATGGCAAGATTGTTAGTCATTTAGCGGCCTAA
Upstream 100 bases:
>100_bases TATGTGATGTATCAGGTGGCCAACCCCGACTATTCAGATTTATAGCACCGAGGGGCCAGCGGCCATTTGGGCGAAATACG TTATTGGAGAGTTTGACCCG
Downstream 100 bases:
>100_bases TTGATGAGTACATCCACGACGACTTCGGTTGATTCCATGGCAAAACCTGAGGTGCAGCAAGCGGTTTATATCGGTCTAGT CAATCCGAAAACTCCGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDCLALARQELNDADFALVEAAW TQLHGKIVSHLAA
Sequences:
>Translated_93_residues MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDCLALARQELNDADFALVEAAW TQLHGKIVSHLAA >Mature_93_residues MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDCLALARQELNDADFALVEAAW TQLHGKIVSHLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10245; Mature: 10245
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDC CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LALARQELNDADFALVEAAWTQLHGKIVSHLAA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLEQYEEALEQWIESVVSHGDDDALFACGYLQGHVAVVLSQLEDEGESTLEALLEKMTDC CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LALARQELNDADFALVEAAWTQLHGKIVSHLAA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA