| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is wzyE [C]
Identifier: 113969666
GI number: 113969666
Start: 1532914
End: 1534098
Strand: Direct
Name: wzyE [C]
Synonym: Shewmr4_1323
Alternate gene names: 113969666
Gene position: 1532914-1534098 (Clockwise)
Preceding gene: 113969665
Following gene: 113969667
Centisome position: 32.57
GC content: 32.32
Gene sequence:
>1185_bases ATGCTAAAAATTGCTCATATAGCACCGGATGAAAAGTTTATAGAAACAGCCGTTGATATTTTTGAAACTGTTTATCCATG TCAGAACACCTTTTATATAACATCATCTAAACCTTGGACCTTTATCGAAGATAATTCTTTATATAGACAGCTAAACAAAA AAAAATGGTTGAAATTACTTTTTACACAAAGGAAAGAATTAAAGGATTATGATTTAGTAATCTTTCATGGTTTGCCTTGT GCTTTATTGATACCTATGGTGTTGCTTAAACAAAATTATGCTTGGTTAGGTTGGGGATACGATTATTATAGTCGCCCCTT TGATTCTGATTTGTTGGCCGAACCATTGGTTTTACCAAAAACGATGGAATACACAAAGACATTTATTAATGATGAGAATC GGAGTTTCGACGTTTTAAATCACATCGTAAAATCTTTAATTAAAATGTTGGTTTGTAGTAAATCTTTCTACCAGTTAGCG ATGCGAAATTTAAAAGTATTTTCACCTGTCTTACCGCAAGAGTATGATTTGGTAAAGGAAAAATATGGACTTGGTAAAGA TACTCAATATTCACCTTGGAACTATGGGATTTTAGAAAGGCATATTATAAAAAATATTCAACTAGGTGAGATATATTCTG CCAATGCTATTCTGCTCGGCAATAGTGCGACAGCAACCAATAACCATCTCGAAGCACTCGACATTATAGAAAAAACAGGT TCGTCAAGGACTATTATTTTACCATTAAGTTATGGTGATGAAAAATATGCTAAATTGATTAAGGAATATATCAATAATAA CCCTCAATTATTTAGTCAATGCCAAGTGCTTGATAATTTTATGCCATTATCGGAATATAACGCCATCATTAATAGTTGTG GTTTTGTTATTATGAATCATGTGCGTCAGCAAGCATTGGGCAATATTGTTGCTATGATGTATCGTGGTTCTAAAGTTTTT CTTCGCGAGGAATCCGTACTTTATAAATATTTTAAAAGTATGAGTGCATATGTTTATTCAGTACAAGAATTAGAGGTTAA TCCGAGTTTGTTACATAGTCATCTCGATACTTATGAAGTTGAACACAATCGCCTAATTTTAAAGTCTGTCTGGTCTGAAA AGGTTATATTGCAACGCACTAAAGATTTAGTTGCTAGCTCAATAAAACCTAAGGAGATATTTTAA
Upstream 100 bases:
>100_bases CATTTGGTGTTTATATCGGTTCACCTGCGAAAAAGATAAAAAGTCGTAAGCAAAATTTGTTGGATAAAGAAATTTTGTTA ATGAGTGGTGACGATAGGAA
Downstream 100 bases:
>100_bases GTTTATTAACCATTAATAACAGCTAATCTTAATGAAAATTAACTTTTTAACTCGATTATACAGATTTCTTGAGCGATTTG TCTGCTTTTTATAAAAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLKIAHIAPDEKFIETAVDIFETVYPCQNTFYITSSKPWTFIEDNSLYRQLNKKKWLKLLFTQRKELKDYDLVIFHGLPC ALLIPMVLLKQNYAWLGWGYDYYSRPFDSDLLAEPLVLPKTMEYTKTFINDENRSFDVLNHIVKSLIKMLVCSKSFYQLA MRNLKVFSPVLPQEYDLVKEKYGLGKDTQYSPWNYGILERHIIKNIQLGEIYSANAILLGNSATATNNHLEALDIIEKTG SSRTIILPLSYGDEKYAKLIKEYINNNPQLFSQCQVLDNFMPLSEYNAIINSCGFVIMNHVRQQALGNIVAMMYRGSKVF LREESVLYKYFKSMSAYVYSVQELEVNPSLLHSHLDTYEVEHNRLILKSVWSEKVILQRTKDLVASSIKPKEIF
Sequences:
>Translated_394_residues MLKIAHIAPDEKFIETAVDIFETVYPCQNTFYITSSKPWTFIEDNSLYRQLNKKKWLKLLFTQRKELKDYDLVIFHGLPC ALLIPMVLLKQNYAWLGWGYDYYSRPFDSDLLAEPLVLPKTMEYTKTFINDENRSFDVLNHIVKSLIKMLVCSKSFYQLA MRNLKVFSPVLPQEYDLVKEKYGLGKDTQYSPWNYGILERHIIKNIQLGEIYSANAILLGNSATATNNHLEALDIIEKTG SSRTIILPLSYGDEKYAKLIKEYINNNPQLFSQCQVLDNFMPLSEYNAIINSCGFVIMNHVRQQALGNIVAMMYRGSKVF LREESVLYKYFKSMSAYVYSVQELEVNPSLLHSHLDTYEVEHNRLILKSVWSEKVILQRTKDLVASSIKPKEIF >Mature_394_residues MLKIAHIAPDEKFIETAVDIFETVYPCQNTFYITSSKPWTFIEDNSLYRQLNKKKWLKLLFTQRKELKDYDLVIFHGLPC ALLIPMVLLKQNYAWLGWGYDYYSRPFDSDLLAEPLVLPKTMEYTKTFINDENRSFDVLNHIVKSLIKMLVCSKSFYQLA MRNLKVFSPVLPQEYDLVKEKYGLGKDTQYSPWNYGILERHIIKNIQLGEIYSANAILLGNSATATNNHLEALDIIEKTG SSRTIILPLSYGDEKYAKLIKEYINNNPQLFSQCQVLDNFMPLSEYNAIINSCGFVIMNHVRQQALGNIVAMMYRGSKVF LREESVLYKYFKSMSAYVYSVQELEVNPSLLHSHLDTYEVEHNRLILKSVWSEKVILQRTKDLVASSIKPKEIF
Specific function: Could Be Involved In Eca Polysaccharide Chain Elongation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45837; Mature: 45837
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIAHIAPDEKFIETAVDIFETVYPCQNTFYITSSKPWTFIEDNSLYRQLNKKKWLKLL CEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHH FTQRKELKDYDLVIFHGLPCALLIPMVLLKQNYAWLGWGYDYYSRPFDSDLLAEPLVLPK HHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCHHHHCCCCCCHHHCCCCCCCC TMEYTKTFINDENRSFDVLNHIVKSLIKMLVCSKSFYQLAMRNLKVFSPVLPQEYDLVKE HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHH KYGLGKDTQYSPWNYGILERHIIKNIQLGEIYSANAILLGNSATATNNHLEALDIIEKTG HHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCEEEECCCCCCCCCCHHHHHHHHHCC SSRTIILPLSYGDEKYAKLIKEYINNNPQLFSQCQVLDNFMPLSEYNAIINSCGFVIMNH CCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VRQQALGNIVAMMYRGSKVFLREESVLYKYFKSMSAYVYSVQELEVNPSLLHSHLDTYEV HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEC EHNRLILKSVWSEKVILQRTKDLVASSIKPKEIF CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLKIAHIAPDEKFIETAVDIFETVYPCQNTFYITSSKPWTFIEDNSLYRQLNKKKWLKLL CEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHH FTQRKELKDYDLVIFHGLPCALLIPMVLLKQNYAWLGWGYDYYSRPFDSDLLAEPLVLPK HHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCHHHHCCCCCCHHHCCCCCCCC TMEYTKTFINDENRSFDVLNHIVKSLIKMLVCSKSFYQLAMRNLKVFSPVLPQEYDLVKE HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHH KYGLGKDTQYSPWNYGILERHIIKNIQLGEIYSANAILLGNSATATNNHLEALDIIEKTG HHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCEEEECCCCCCCCCCHHHHHHHHHCC SSRTIILPLSYGDEKYAKLIKEYINNNPQLFSQCQVLDNFMPLSEYNAIINSCGFVIMNH CCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VRQQALGNIVAMMYRGSKVFLREESVLYKYFKSMSAYVYSVQELEVNPSLLHSHLDTYEV HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEC EHNRLILKSVWSEKVILQRTKDLVASSIKPKEIF CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA