| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
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The map label for this gene is 113969667
Identifier: 113969667
GI number: 113969667
Start: 1534733
End: 1535761
Strand: Direct
Name: 113969667
Synonym: Shewmr4_1324
Alternate gene names: NA
Gene position: 1534733-1535761 (Clockwise)
Preceding gene: 113969666
Following gene: 113969668
Centisome position: 32.61
GC content: 26.72
Gene sequence:
>1029_bases ATGCATGAGTACTTAGGAATATTTATGTTGCCTTGGGTAATTCTTATAATCTTTACCTTCAGCTTGATAGTGAAAAGTAG GCTTGTATTTGCTCTTTCTTCTCTTTTTCTATTTTTTTTCTCAGCAATAAGATATGATGTTGGATTCGATTACGCGACAT ATTGGAATATGATAAGTAATGGTAGTTTTGAACATTACTCAAGCGAAATTGCAAATTACACTCTTTTCACTTTAAGCTAT TTATTAGACACACCTGAAATTTACTTCATTATTACTTCATTTTTTATAATTTTTCTATTTACAATTGGTATTGTAAAATT AAGTAAGGACTGGTGTTTTTCTTTATTGATTTTCATTTCGATTCCAATTTTTTATTTAAACTCTCTTTCTATTGTAAGGC AGTTTTGTGCTGTATCGTTAATTTTTTATGGTTTCAAATGCATCTTAAATAAGCAATATGTTTTTTTTATTTTAATTGTT CTTGCTGCATCTCTTTTTCATCCTACAGCAATAGTATCACTTGTTTGCCTCTTATTTGTTAGTAAAAATTTTTCGAATAA GTTTTATTTTCTTTTTTTCTTTTTAGTACTTGCCTTAAAACAATTTTTTCTTTATGGATTAGAAGTTTATTTCAATTATT ACTATAAATATTATATTCAAAATGAAGTCGTAGGAGGAGGAAACGCAATAGCTTTTCTGTTGCTAGGAATTTGGTTTTTT TGTCTGGTTTTTAGAAGGAATGTGAAGTCAGAACCGTGTTTTGAATTTTTAATTAATACTTTTACATTTGGTGTAATATT ATTTTTGATATTAATTCAATATGGTCATGCATCAAGAATCTCTCTTTATTTTTTAACAGCTTTAATTCCATTGTTGCCTT ACTATATTGAAATATTTAACCCAAGAAAGATTGCGCGTGTAGTCGGTTTTTTAGTTTTGTTTCCATTACTTATTTATTCA CTGTATTTAGGTACATTAAATCCAATAAAAGATCCGAATATACCTTACTTATTTATTTTTAATAGATAA
Upstream 100 bases:
>100_bases AAGTTTGCACTATAAGCTGTCTAAGTCATTGGCCTAAAAGTGTATAACGAAGGTGAGTTGAAAATTTTTTATATTCATTT TTTGCCATTTTCGGTAAATT
Downstream 100 bases:
>100_bases GTAAGGTTATCTTCATAACATAGTTTTATATAGGAATTGCTTTGAAAGACTTGGTTTCAATAATTATGCCTGCACACAAT TCTAGTGCTACGATTATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MHEYLGIFMLPWVILIIFTFSLIVKSRLVFALSSLFLFFFSAIRYDVGFDYATYWNMISNGSFEHYSSEIANYTLFTLSY LLDTPEIYFIITSFFIIFLFTIGIVKLSKDWCFSLLIFISIPIFYLNSLSIVRQFCAVSLIFYGFKCILNKQYVFFILIV LAASLFHPTAIVSLVCLLFVSKNFSNKFYFLFFFLVLALKQFFLYGLEVYFNYYYKYYIQNEVVGGGNAIAFLLLGIWFF CLVFRRNVKSEPCFEFLINTFTFGVILFLILIQYGHASRISLYFLTALIPLLPYYIEIFNPRKIARVVGFLVLFPLLIYS LYLGTLNPIKDPNIPYLFIFNR
Sequences:
>Translated_342_residues MHEYLGIFMLPWVILIIFTFSLIVKSRLVFALSSLFLFFFSAIRYDVGFDYATYWNMISNGSFEHYSSEIANYTLFTLSY LLDTPEIYFIITSFFIIFLFTIGIVKLSKDWCFSLLIFISIPIFYLNSLSIVRQFCAVSLIFYGFKCILNKQYVFFILIV LAASLFHPTAIVSLVCLLFVSKNFSNKFYFLFFFLVLALKQFFLYGLEVYFNYYYKYYIQNEVVGGGNAIAFLLLGIWFF CLVFRRNVKSEPCFEFLINTFTFGVILFLILIQYGHASRISLYFLTALIPLLPYYIEIFNPRKIARVVGFLVLFPLLIYS LYLGTLNPIKDPNIPYLFIFNR >Mature_342_residues MHEYLGIFMLPWVILIIFTFSLIVKSRLVFALSSLFLFFFSAIRYDVGFDYATYWNMISNGSFEHYSSEIANYTLFTLSY LLDTPEIYFIITSFFIIFLFTIGIVKLSKDWCFSLLIFISIPIFYLNSLSIVRQFCAVSLIFYGFKCILNKQYVFFILIV LAASLFHPTAIVSLVCLLFVSKNFSNKFYFLFFFLVLALKQFFLYGLEVYFNYYYKYYIQNEVVGGGNAIAFLLLGIWFF CLVFRRNVKSEPCFEFLINTFTFGVILFLILIQYGHASRISLYFLTALIPLLPYYIEIFNPRKIARVVGFLVLFPLLIYS LYLGTLNPIKDPNIPYLFIFNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40241; Mature: 40241
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEYLGIFMLPWVILIIFTFSLIVKSRLVFALSSLFLFFFSAIRYDVGFDYATYWNMISN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC GSFEHYSSEIANYTLFTLSYLLDTPEIYFIITSFFIIFLFTIGIVKLSKDWCFSLLIFIS CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPIFYLNSLSIVRQFCAVSLIFYGFKCILNKQYVFFILIVLAASLFHPTAIVSLVCLLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH SKNFSNKFYFLFFFLVLALKQFFLYGLEVYFNYYYKYYIQNEVVGGGNAIAFLLLGIWFF HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH CLVFRRNVKSEPCFEFLINTFTFGVILFLILIQYGHASRISLYFLTALIPLLPYYIEIFN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC PRKIARVVGFLVLFPLLIYSLYLGTLNPIKDPNIPYLFIFNR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MHEYLGIFMLPWVILIIFTFSLIVKSRLVFALSSLFLFFFSAIRYDVGFDYATYWNMISN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC GSFEHYSSEIANYTLFTLSYLLDTPEIYFIITSFFIIFLFTIGIVKLSKDWCFSLLIFIS CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPIFYLNSLSIVRQFCAVSLIFYGFKCILNKQYVFFILIVLAASLFHPTAIVSLVCLLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH SKNFSNKFYFLFFFLVLALKQFFLYGLEVYFNYYYKYYIQNEVVGGGNAIAFLLLGIWFF HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH CLVFRRNVKSEPCFEFLINTFTFGVILFLILIQYGHASRISLYFLTALIPLLPYYIEIFN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC PRKIARVVGFLVLFPLLIYSLYLGTLNPIKDPNIPYLFIFNR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA