Click here to switch to the map view.

The map label for this gene is yghX [H]

Identifier: 113969177

GI number: 113969177

Start: 981944

End: 982906

Strand: Direct

Name: yghX [H]

Synonym: Shewmr4_0833

Alternate gene names: 113969177

Gene position: 981944-982906 (Clockwise)

Preceding gene: 113969173

Following gene: 113969178

Centisome position: 20.86

GC content: 55.24

Gene sequence:

>963_bases
ATGAGCCCACAACCCAAGTCCGACAATAACGCGCCAGCTGCTCAACCTATCCCGCAGGAGGCCTTTGATTGGTACGATGA
ATATGCCCACGGCATCATCGACCGCCGCGAGTTTATGGCTCGCCTCGCCGGCCTTGTGGCACTGGGGTTTACCATGACAA
CGCTCACTGGCGCACTCATGCCCAACTATGCCTTAGCCGAACAAGTCTCCTTTAACGATCCCAGCATTCAAGCCAGTTAT
GTGAAGTTTCCCTCCCCCGAAGGGTATGGAGAAGGGCGCGGCTATTTAGTGATGCCAGCTTCCATGCTTATTCCCGGCAA
AGAGGCGGGCGATCCTAAGACCTTGGACCCCACTAAAAAAGCCGCCGTGGTGTTAGTGGTGCATGAAAACCGTGGCCTGA
ATCCCTATATCGAAGATGTGGCCCGCCGCTTAGCGGCCAAAGGCTATATCGCCTTCGCTCCCGATGCGCTTTACAGTCTC
GGCGGCTATCCCGGTAATGACGATGCGGGCCGCGCCATGCAAGCCAGTCTCGACAGAGCCAAAATCGAGCAGGACTTTAT
CGCCGCCGCGCGCTTTCTCAAGGCGCATCCACAGAGTAATGGCAAACTCGGCGCCGTCGGTTTCTGCTTTGGTGGCTACA
TAGTCAATATGCTCGCCGCCAGCATTCCCGATGAACTCGCTGCTGGCGTGCCTTTTTATGGCACACCCGCGGCAACAGAG
CTACGCAGCCGAGTCACTGGCCCGCTGATGTTGCAATTTGCCGCGTTAGATCAACGGATTAACGACACTTGGGCCGAGTA
CGAAACCCAATTAAAGGCTAACAAGGCCGAGTATATTGCCTACCTCTATCCCAATGTGAATCATGGTTTCCATAACGATT
CCACCGCACGCTACGATGAGCCAACCGCCGAGCTCGCATGGGCAAGAACCTTGGATTTCTTTGGGAAGTACCTACAAGGT
TAG

Upstream 100 bases:

>100_bases
CCCTGATAAGGCTTCATCCTTTACTCTTGTTAACGCCGCTAGATAACTCACAAGCTAGGAATGATAAACCTGTGGTAGCT
TGTTCAATGGAGAAAGAACG

Downstream 100 bases:

>100_bases
GGGTTGCCGAATTGCAAAAGGGAATTTTGGGATGCGGCCTAATGGCCGAGAAAGTCGTCGGGTTTCACCCTACACTCGAT
GATATTGCTGTTAACTGTTA

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSPQPKSDNNAPAAQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFTMTTLTGALMPNYALAEQVSFNDPSIQASY
VKFPSPEGYGEGRGYLVMPASMLIPGKEAGDPKTLDPTKKAAVVLVVHENRGLNPYIEDVARRLAAKGYIAFAPDALYSL
GGYPGNDDAGRAMQASLDRAKIEQDFIAAARFLKAHPQSNGKLGAVGFCFGGYIVNMLAASIPDELAAGVPFYGTPAATE
LRSRVTGPLMLQFAALDQRINDTWAEYETQLKANKAEYIAYLYPNVNHGFHNDSTARYDEPTAELAWARTLDFFGKYLQG

Sequences:

>Translated_320_residues
MSPQPKSDNNAPAAQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFTMTTLTGALMPNYALAEQVSFNDPSIQASY
VKFPSPEGYGEGRGYLVMPASMLIPGKEAGDPKTLDPTKKAAVVLVVHENRGLNPYIEDVARRLAAKGYIAFAPDALYSL
GGYPGNDDAGRAMQASLDRAKIEQDFIAAARFLKAHPQSNGKLGAVGFCFGGYIVNMLAASIPDELAAGVPFYGTPAATE
LRSRVTGPLMLQFAALDQRINDTWAEYETQLKANKAEYIAYLYPNVNHGFHNDSTARYDEPTAELAWARTLDFFGKYLQG
>Mature_319_residues
SPQPKSDNNAPAAQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFTMTTLTGALMPNYALAEQVSFNDPSIQASYV
KFPSPEGYGEGRGYLVMPASMLIPGKEAGDPKTLDPTKKAAVVLVVHENRGLNPYIEDVARRLAAKGYIAFAPDALYSLG
GYPGNDDAGRAMQASLDRAKIEQDFIAAARFLKAHPQSNGKLGAVGFCFGGYIVNMLAASIPDELAAGVPFYGTPAATEL
RSRVTGPLMLQFAALDQRINDTWAEYETQLKANKAEYIAYLYPNVNHGFHNDSTARYDEPTAELAWARTLDFFGKYLQG

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994982, Length=211, Percent_Identity=29.8578199052133, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 34907; Mature: 34776

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQPKSDNNAPAAQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFTMTTLTGALM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PNYALAEQVSFNDPSIQASYVKFPSPEGYGEGRGYLVMPASMLIPGKEAGDPKTLDPTKK
CCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCC
AAVVLVVHENRGLNPYIEDVARRLAAKGYIAFAPDALYSLGGYPGNDDAGRAMQASLDRA
EEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHHH
KIEQDFIAAARFLKAHPQSNGKLGAVGFCFGGYIVNMLAASIPDELAAGVPFYGTPAATE
HHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHH
LRSRVTGPLMLQFAALDQRINDTWAEYETQLKANKAEYIAYLYPNVNHGFHNDSTARYDE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC
PTAELAWARTLDFFGKYLQG
CHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPQPKSDNNAPAAQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFTMTTLTGALM
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PNYALAEQVSFNDPSIQASYVKFPSPEGYGEGRGYLVMPASMLIPGKEAGDPKTLDPTKK
CCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCC
AAVVLVVHENRGLNPYIEDVARRLAAKGYIAFAPDALYSLGGYPGNDDAGRAMQASLDRA
EEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCHHHHHHHHHHHH
KIEQDFIAAARFLKAHPQSNGKLGAVGFCFGGYIVNMLAASIPDELAAGVPFYGTPAATE
HHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHH
LRSRVTGPLMLQFAALDQRINDTWAEYETQLKANKAEYIAYLYPNVNHGFHNDSTARYDE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC
PTAELAWARTLDFFGKYLQG
CHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]