Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

Click here to switch to the map view.

The map label for this gene is 113969178

Identifier: 113969178

GI number: 113969178

Start: 983557

End: 985392

Strand: Direct

Name: 113969178

Synonym: Shewmr4_0834

Alternate gene names: NA

Gene position: 983557-985392 (Clockwise)

Preceding gene: 113969177

Following gene: 113969179

Centisome position: 20.9

GC content: 34.15

Gene sequence:

>1836_bases
ATGTATAGAAGTGTATTAGTTATTTTATCTATTATTTCAGTATCAGCTATAGCGGTTGAAAGTCCTTATTCAATTGATAA
GACGTATGAAAATAACCTGCCTAAATCATCCTTAAAGGTGGCTTTCTCTGAAGCTAACAACGAAATATTAATATCTGGTA
CTGCTAGTGATGAGTTTTCTGCTGATAAAAGAATTTATTTATGGAAGTATAATGTTGATAATAATGGGGTGGATTATATT
AGCTCTGCCAGTTTTGGTATAGCATCAGATCTCGTTGGTTATATTAATGTGGAACCTATAGGTGAATATAATAAAAACTA
TTACGCTTTATCTGAGTCAAATTATGATGGAGCTAGAAAATTAGTTAGATTTACTCTTGAAGGCAATGAGTTATCATTGT
CTCAAGAAGTAGAATTTTCATCTAGTTCAGGTCAGTACGGTTCATATGTAGAACAGATTGAATTTGTAAATAATAATACC
ATTGTTGCTTTGCATCCAAATCATGATGATACTCTGAGTGGAAAAGTCAGTTACGATTACAGTGTTTGTAATTTAAGTGG
AAATGGTGAGATAGATTCTTGCGAGCGAAAAAAAATCTTAGCTGATAAATCACTCATATCAAATAGTACCTACAAGTTAT
ATCGATTAGAGGGTCGTGATGAAATTATCTTCTATCCAGAAAGGGTCGGGATTAATGAAACGAAGGTAGAGCCTAAGTTG
TATGTCCTTAAATGGCAATCTGATATTAATGATTTTGTGGTTTTTCAAGAAATAGTTATCCCTGAAAGAGTTGACTCGAC
TAAATTTAGTGGTGTTAAAACCATATATACAATTAATGATGGGAAAGAGCTTATAGTAGGTAGTGATATGCTTCTGCATT
ATCAATACTCACCAGATGATAATAAATTTGTTCTGTCAAAAATGAAGAATAGTGTTAGTTATCCCAAAGAAGCTATTTAT
TTAAAGAGTGAAAATTATTTTATTGAACGCTCTGGAAGAAATTCTTATGTGTTTGATGATGAAGAAAAGTATTTTTATAA
GTCTTCCCAGGTGTATGCTATTGCAGATGGTTGGTTTCAGCTCACTGATGACAAGAAAGGTTTTTTCGTTAACTTAATGT
CACCTAATATTACAACGTTTACCCTCTCTAACCCTAACCCTCTTATATATAAAGGTGGTTTACCTAAAGGCTCTATTCCA
GCTGTTCAAGATGTTCCTTTGGCGATAAATATTAAGAAGCATTTTCTAAATGGAAACAACCTTGTGGTTACCGGTTTTCA
AACTGAATATTTACATGAAAGATTGATTTGGGATGGTGAATATATTCGTGGGACTTTTACTAATGAAGATATGTTTGCCT
CAAAAAATTTAATTGATCCAACACCAGCCAGTCCCATTCAAGTGAGAGTGAATATTCCTCCATTATCTACAGAGATCTTT
TATATTACACCGACTAACGTTAACGATGCTCCTATGTTAACTGCGGAGATTGGTATTCAGTATCTTGAAAAGGATCAACA
GTATTACGGTGTGCTTTCAGGAATTGTCGTCGATCCTGATAGAGAGGCTGTGACTTATACATATAAGAATGTACCTAATG
GATTAATAGCTAGTGAGGATGGAATATTCCACGGTGCAGTTAAGACTAAAGGTCAATACTTGATGACGGTCACCGCAACA
GACCCTTCAGGTGCAGAGTTGACGTTTGATGTGACATTTATCGTTAATGATACTGGTGAACCTGAAAAATCATCCGAAGG
CGGTGGTGGGATTATGGATTTCACATTGTTGATGCTATTGATTACGTTGTTTTTTAGGCGTTTAAAGCATAATTAA

Upstream 100 bases:

>100_bases
CATGTTCTTAACTTAGATACTTAAAATTCTCCTGCGACCTGTTACTTATGATTTATGTTGTTCAACTAGTAATTATACTG
ATGTTAGGAGAGGTATCTGT

Downstream 100 bases:

>100_bases
ATACTTAACAATTGAAGTTGATGCTTTGTGACTTGATGAATTATGGGGTGATTACGGCCTAGCGGTCGAGATGTATCAAG
GTCGTGGGGCTTCCCCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MYRSVLVILSIISVSAIAVESPYSIDKTYENNLPKSSLKVAFSEANNEILISGTASDEFSADKRIYLWKYNVDNNGVDYI
SSASFGIASDLVGYINVEPIGEYNKNYYALSESNYDGARKLVRFTLEGNELSLSQEVEFSSSSGQYGSYVEQIEFVNNNT
IVALHPNHDDTLSGKVSYDYSVCNLSGNGEIDSCERKKILADKSLISNSTYKLYRLEGRDEIIFYPERVGINETKVEPKL
YVLKWQSDINDFVVFQEIVIPERVDSTKFSGVKTIYTINDGKELIVGSDMLLHYQYSPDDNKFVLSKMKNSVSYPKEAIY
LKSENYFIERSGRNSYVFDDEEKYFYKSSQVYAIADGWFQLTDDKKGFFVNLMSPNITTFTLSNPNPLIYKGGLPKGSIP
AVQDVPLAINIKKHFLNGNNLVVTGFQTEYLHERLIWDGEYIRGTFTNEDMFASKNLIDPTPASPIQVRVNIPPLSTEIF
YITPTNVNDAPMLTAEIGIQYLEKDQQYYGVLSGIVVDPDREAVTYTYKNVPNGLIASEDGIFHGAVKTKGQYLMTVTAT
DPSGAELTFDVTFIVNDTGEPEKSSEGGGGIMDFTLLMLLITLFFRRLKHN

Sequences:

>Translated_611_residues
MYRSVLVILSIISVSAIAVESPYSIDKTYENNLPKSSLKVAFSEANNEILISGTASDEFSADKRIYLWKYNVDNNGVDYI
SSASFGIASDLVGYINVEPIGEYNKNYYALSESNYDGARKLVRFTLEGNELSLSQEVEFSSSSGQYGSYVEQIEFVNNNT
IVALHPNHDDTLSGKVSYDYSVCNLSGNGEIDSCERKKILADKSLISNSTYKLYRLEGRDEIIFYPERVGINETKVEPKL
YVLKWQSDINDFVVFQEIVIPERVDSTKFSGVKTIYTINDGKELIVGSDMLLHYQYSPDDNKFVLSKMKNSVSYPKEAIY
LKSENYFIERSGRNSYVFDDEEKYFYKSSQVYAIADGWFQLTDDKKGFFVNLMSPNITTFTLSNPNPLIYKGGLPKGSIP
AVQDVPLAINIKKHFLNGNNLVVTGFQTEYLHERLIWDGEYIRGTFTNEDMFASKNLIDPTPASPIQVRVNIPPLSTEIF
YITPTNVNDAPMLTAEIGIQYLEKDQQYYGVLSGIVVDPDREAVTYTYKNVPNGLIASEDGIFHGAVKTKGQYLMTVTAT
DPSGAELTFDVTFIVNDTGEPEKSSEGGGGIMDFTLLMLLITLFFRRLKHN
>Mature_611_residues
MYRSVLVILSIISVSAIAVESPYSIDKTYENNLPKSSLKVAFSEANNEILISGTASDEFSADKRIYLWKYNVDNNGVDYI
SSASFGIASDLVGYINVEPIGEYNKNYYALSESNYDGARKLVRFTLEGNELSLSQEVEFSSSSGQYGSYVEQIEFVNNNT
IVALHPNHDDTLSGKVSYDYSVCNLSGNGEIDSCERKKILADKSLISNSTYKLYRLEGRDEIIFYPERVGINETKVEPKL
YVLKWQSDINDFVVFQEIVIPERVDSTKFSGVKTIYTINDGKELIVGSDMLLHYQYSPDDNKFVLSKMKNSVSYPKEAIY
LKSENYFIERSGRNSYVFDDEEKYFYKSSQVYAIADGWFQLTDDKKGFFVNLMSPNITTFTLSNPNPLIYKGGLPKGSIP
AVQDVPLAINIKKHFLNGNNLVVTGFQTEYLHERLIWDGEYIRGTFTNEDMFASKNLIDPTPASPIQVRVNIPPLSTEIF
YITPTNVNDAPMLTAEIGIQYLEKDQQYYGVLSGIVVDPDREAVTYTYKNVPNGLIASEDGIFHGAVKTKGQYLMTVTAT
DPSGAELTFDVTFIVNDTGEPEKSSEGGGGIMDFTLLMLLITLFFRRLKHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68712; Mature: 68712

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRSVLVILSIISVSAIAVESPYSIDKTYENNLPKSSLKVAFSEANNEILISGTASDEFS
CCHHHHHHHHHHHHHEEEECCCCCCCCHHHCCCCHHHEEEEEECCCCEEEEEECCCCCCC
ADKRIYLWKYNVDNNGVDYISSASFGIASDLVGYINVEPIGEYNKNYYALSESNYDGARK
CCCEEEEEEEECCCCCCCEEECCCCCCHHHCEEEEEEEECCCCCCCEEEEECCCCCCCEE
LVRFTLEGNELSLSQEVEFSSSSGQYGSYVEQIEFVNNNTIVALHPNHDDTLSGKVSYDY
EEEEEECCCEEEECEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEE
SVCNLSGNGEIDSCERKKILADKSLISNSTYKLYRLEGRDEIIFYPERVGINETKVEPKL
EEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEE
YVLKWQSDINDFVVFQEIVIPERVDSTKFSGVKTIYTINDGKELIVGSDMLLHYQYSPDD
EEEEECCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEEECCCCEEEEECEEEEEEEECCCC
NKFVLSKMKNSVSYPKEAIYLKSENYFIERSGRNSYVFDDEEKYFYKSSQVYAIADGWFQ
CEEHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCEEEECCCCEEEECCEEEEEECCEEE
LTDDKKGFFVNLMSPNITTFTLSNPNPLIYKGGLPKGSIPAVQDVPLAINIKKHFLNGNN
EECCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCC
LVVTGFQTEYLHERLIWDGEYIRGTFTNEDMFASKNLIDPTPASPIQVRVNIPPLSTEIF
EEEEECCHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE
YITPTNVNDAPMLTAEIGIQYLEKDQQYYGVLSGIVVDPDREAVTYTYKNVPNGLIASED
EEECCCCCCCCEEEHHHHHHHHHCCHHHHEEEECEEECCCCCEEEEEECCCCCCCEECCC
GIFHGAVKTKGQYLMTVTATDPSGAELTFDVTFIVNDTGEPEKSSEGGGGIMDFTLLMLL
CEEEEEEECCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
ITLFFRRLKHN
HHHHHHHHHCC
>Mature Secondary Structure
MYRSVLVILSIISVSAIAVESPYSIDKTYENNLPKSSLKVAFSEANNEILISGTASDEFS
CCHHHHHHHHHHHHHEEEECCCCCCCCHHHCCCCHHHEEEEEECCCCEEEEEECCCCCCC
ADKRIYLWKYNVDNNGVDYISSASFGIASDLVGYINVEPIGEYNKNYYALSESNYDGARK
CCCEEEEEEEECCCCCCCEEECCCCCCHHHCEEEEEEEECCCCCCCEEEEECCCCCCCEE
LVRFTLEGNELSLSQEVEFSSSSGQYGSYVEQIEFVNNNTIVALHPNHDDTLSGKVSYDY
EEEEEECCCEEEECEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEE
SVCNLSGNGEIDSCERKKILADKSLISNSTYKLYRLEGRDEIIFYPERVGINETKVEPKL
EEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEE
YVLKWQSDINDFVVFQEIVIPERVDSTKFSGVKTIYTINDGKELIVGSDMLLHYQYSPDD
EEEEECCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEEECCCCEEEEECEEEEEEEECCCC
NKFVLSKMKNSVSYPKEAIYLKSENYFIERSGRNSYVFDDEEKYFYKSSQVYAIADGWFQ
CEEHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCEEEECCCCEEEECCEEEEEECCEEE
LTDDKKGFFVNLMSPNITTFTLSNPNPLIYKGGLPKGSIPAVQDVPLAINIKKHFLNGNN
EECCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCC
LVVTGFQTEYLHERLIWDGEYIRGTFTNEDMFASKNLIDPTPASPIQVRVNIPPLSTEIF
EEEEECCHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE
YITPTNVNDAPMLTAEIGIQYLEKDQQYYGVLSGIVVDPDREAVTYTYKNVPNGLIASED
EEECCCCCCCCEEEHHHHHHHHHCCHHHHEEEECEEECCCCCEEEEEECCCCCCCEECCC
GIFHGAVKTKGQYLMTVTATDPSGAELTFDVTFIVNDTGEPEKSSEGGGGIMDFTLLMLL
CEEEEEEECCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
ITLFFRRLKHN
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA