| Definition | Shewanella sp. MR-4 chromosome, complete genome. |
|---|---|
| Accession | NC_008321 |
| Length | 4,706,287 |
Click here to switch to the map view.
The map label for this gene is fba [H]
Identifier: 113969120
GI number: 113969120
Start: 903414
End: 904481
Strand: Direct
Name: fba [H]
Synonym: Shewmr4_0776
Alternate gene names: 113969120
Gene position: 903414-904481 (Clockwise)
Preceding gene: 113969119
Following gene: 113969121
Centisome position: 19.2
GC content: 49.44
Gene sequence:
>1068_bases ATGGCGTTAATTTCCCTACGACAACTACTCGATCACGCGGCAGAGCATGGATACGGTGTGCCAGCGTTCAACGTAAACAA CCTTGAGCAAATGCGCGCCATCATGCAGGCCGCAGAAGCTACAGACAGCCCAGTTATCGTGCAAGCCTCTGCGGGTGCAC GTAAATATGCGCGTCCACAATTCTTAAAATACCTGATGACGGCTGCACTTGAGCAGTATCCTGATATCCCTGTCTGTATT CACCAAGACCATGGTACCGATCCTGACATCTGTCAGCGTTCTATCCAATTAGGTATGTCATCAGTCATGATGGACGGTTC ATTAATGGCCGACGGTAAAACCCCAGCTTCTTACGAGTACAACGTTGATGTGACTCGCAGAACTGTTGCATTCGCCCACG CGTGTGGTGTGTCTGTAGAGGGGGAAATCGGTTGTTTAGGCAGCTTAGAAACCGGTACTGCCGGTGAAGAAGACGGTGTG GGTGCAGAAGGCGTATTAAGCCACGACCAACTGCTGACCAGCCCAGAAGAAGCGGCTCGCTTCGTTGCTGATACCCATGT TGACGCGCTGGCGATTGCGATTGGTACTAGCCACGGTGCATACAAGTTCAGCCGTAAACCAACGGGTGATGTACTGCGTA TCGACCGCATCAAAGAAATCCATGCCCGCATTCCTAACACTCACTTAGTGATGCACGGTTCTTCTTCAGTGCCACAGGAA TGGTTACAGATCATCAACCAATACGGTGGTCAAATTCCTGAAACTTACGGCGTGCCATTAGAAGAAATCGTTGAAGGTAT CAAACACGGCGTGCGTAAAGTGAACATCGATACCGATTTGCGCTTAGCATCTACCGGTGCGGTACGTAAATACTTGGCCG AACATCCAAGCGAGTTCGACCCTCGTAAGTTCCTGAAAGCCTCTATGGAAGCGATGGCAGACATCTGTACTGTTCGCTAC GAAGCTTTCGGTTGTGCGGGTCAAGCTTCTAAGATTAAGCCATTGTCTTTACAAGCAATGTACAAAGCTTATCAGTCAGG CGCATTAGATCCTAAGATCAATCTCTAA
Upstream 100 bases:
>100_bases ACCTGTTCTTGAGTGATTGAGCATAAAAATCCATCCAAACGATAGCGACCTCGGTGACCTAACGTCGATGTGACAGTCAC CCTATTATTGGAGTTAAAAA
Downstream 100 bases:
>100_bases GCCTTAAATACTGCTCTAAAAAGCCCGCCAAAGTGCGGGCTTTTTTATGCAAAAAACCGTTGAATTTTCATTTTTTAATC GTAAATGTTAGTATTGCCAT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMTAALEQYPDIPVCI HQDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEYNVDVTRRTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGV GAEGVLSHDQLLTSPEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQE WLQIINQYGGQIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKYLAEHPSEFDPRKFLKASMEAMADICTVRY EAFGCAGQASKIKPLSLQAMYKAYQSGALDPKINL
Sequences:
>Translated_355_residues MALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMTAALEQYPDIPVCI HQDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEYNVDVTRRTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGV GAEGVLSHDQLLTSPEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQE WLQIINQYGGQIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKYLAEHPSEFDPRKFLKASMEAMADICTVRY EAFGCAGQASKIKPLSLQAMYKAYQSGALDPKINL >Mature_354_residues ALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMTAALEQYPDIPVCIH QDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEYNVDVTRRTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGVG AEGVLSHDQLLTSPEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQEW LQIINQYGGQIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKYLAEHPSEFDPRKFLKASMEAMADICTVRYE AFGCAGQASKIKPLSLQAMYKAYQSGALDPKINL
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=330, Percent_Identity=34.2424242424242, Blast_Score=175, Evalue=4e-45, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=33.7386018237082, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1788072, Length=288, Percent_Identity=29.1666666666667, Blast_Score=109, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38511; Mature: 38380
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQ CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCHH FLKYLMTAALEQYPDIPVCIHQDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEE NVDVTRRTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGVGAEGVLSHDQLLTSPEEAAR ECCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHH FVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQE HHHHHCHHEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH WLQIINQYGGQIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKYLAEHPSEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHHCCCCCC PRKFLKASMEAMADICTVRYEAFGCAGQASKIKPLSLQAMYKAYQSGALDPKINL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQ HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCHH FLKYLMTAALEQYPDIPVCIHQDHGTDPDICQRSIQLGMSSVMMDGSLMADGKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEE NVDVTRRTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGVGAEGVLSHDQLLTSPEEAAR ECCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHH FVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQE HHHHHCHHEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH WLQIINQYGGQIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKYLAEHPSEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHHCCCCCC PRKFLKASMEAMADICTVRYEAFGCAGQASKIKPLSLQAMYKAYQSGALDPKINL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]